RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 HSPA6P17066 643 aa25.93■■□□□ 1.74
PRDM16-202ENST00000378389 ZPR1O75312 459 aa25.92■■□□□ 1.74
PRDM16-202ENST00000378389 AFDNP55196 1824 aaKnown RBP25.91■■□□□ 1.74
PRDM16-202ENST00000378389 USPL1Q5W0Q7 1092 aa25.91■■□□□ 1.74
PRDM16-202ENST00000378389 ZBTB1Q9Y2K1 713 aa25.91■■□□□ 1.74
PRDM16-202ENST00000378389 ARHGAP27Q6ZUM4 889 aa25.9■■□□□ 1.74
PRDM16-202ENST00000378389 DALRD3Q5D0E6 543 aaKnown RBP25.89■■□□□ 1.74
PRDM16-202ENST00000378389 GAS2L2Q8NHY3 880 aa25.89■■□□□ 1.74
PRDM16-202ENST00000378389 BCL2L12Q9HB09 334 aa25.89■■□□□ 1.74
PRDM16-202ENST00000378389 DLEC1Q9Y238 1755 aa25.89■■□□□ 1.73
PRDM16-202ENST00000378389 CEMIPQ8WUJ3 1361 aa25.88■■□□□ 1.73
PRDM16-202ENST00000378389 NFIXQ14938 502 aa25.87■■□□□ 1.73
PRDM16-202ENST00000378389 IL17REQ8NFR9 667 aa25.87■■□□□ 1.73
PRDM16-202ENST00000378389 GNAT3A8MTJ3 354 aa25.86■■□□□ 1.73
PRDM16-202ENST00000378389 EIF5P55010 431 aaKnown RBP25.86■■□□□ 1.73
PRDM16-202ENST00000378389 SBF1O95248 1867 aa25.85■■□□□ 1.73
PRDM16-202ENST00000378389 HEG1Q9ULI3 1381 aa25.85■■□□□ 1.73
PRDM16-202ENST00000378389 SCN7AQ01118 1682 aa25.84■■□□□ 1.73
PRDM16-202ENST00000378389 STARD3NLO95772 234 aa25.84■■□□□ 1.73
PRDM16-202ENST00000378389 CHRNA5P30532 468 aa25.84■■□□□ 1.73
PRDM16-202ENST00000378389 ZNF790Q6PG37 636 aa25.84■■□□□ 1.73
PRDM16-202ENST00000378389 TOMM70O94826 608 aa25.83■■□□□ 1.73
PRDM16-202ENST00000378389 C9orf131Q5VYM1 1079 aa25.83■■□□□ 1.73
PRDM16-202ENST00000378389 TTC5Q8N0Z6 440 aa25.83■■□□□ 1.73
PRDM16-202ENST00000378389 ZNF496Q96IT1 587 aaPredicted RBP25.83■■□□□ 1.73
PRDM16-202ENST00000378389 TEX13AQ9BXU3 409 aaPredicted RBP25.83■■□□□ 1.73
PRDM16-202ENST00000378389 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
PRDM16-202ENST00000378389 A0A087WZG4 1122 aa25.81■■□□□ 1.72
PRDM16-202ENST00000378389 TEFQ10587 303 aa25.81■■□□□ 1.72
PRDM16-202ENST00000378389 RSPH6AQ9H0K4 717 aa25.81■■□□□ 1.72
PRDM16-202ENST00000378389 SERPINB2P05120 415 aa25.8■■□□□ 1.72
PRDM16-202ENST00000378389 ZC3H4Q9UPT8 1303 aaKnown RBP25.8■■□□□ 1.72
PRDM16-202ENST00000378389 NMRK2Q9NPI5 230 aa25.78■■□□□ 1.72
PRDM16-202ENST00000378389 CANXP27824 592 aaKnown RBP25.77■■□□□ 1.72
PRDM16-202ENST00000378389 IL6STP40189 918 aaPredicted RBP25.77■■□□□ 1.72
PRDM16-202ENST00000378389 PHACTR3Q96KR7 559 aa25.77■■□□□ 1.72
PRDM16-202ENST00000378389 CFAP53Q96M91 514 aa25.77■■□□□ 1.72
PRDM16-202ENST00000378389 RBM46Q8TBY0 533 aaKnown RBP25.76■■□□□ 1.71
PRDM16-202ENST00000378389 FMNL2Q96PY5 1086 aa25.76■■□□□ 1.71
PRDM16-202ENST00000378389 CARMIL3Q8ND23 1372 aa25.76■■□□□ 1.71
PRDM16-202ENST00000378389 TNRC6CQ9HCJ0 1690 aaKnown RBP25.76■■□□□ 1.71
PRDM16-202ENST00000378389 ANKRD31Q8N7Z5 1873 aa25.76■■□□□ 1.71
PRDM16-202ENST00000378389 PRKAR2BP31323 418 aa25.75■■□□□ 1.71
PRDM16-202ENST00000378389 APLP1P51693 650 aa25.75■■□□□ 1.71
PRDM16-202ENST00000378389 RNF181Q9P0P0 153 aa25.75■■□□□ 1.71
PRDM16-202ENST00000378389 PDZRN3Q9UPQ7 1066 aa25.74■■□□□ 1.71
PRDM16-202ENST00000378389 BCORQ6W2J9 1755 aa25.74■■□□□ 1.71
PRDM16-202ENST00000378389 KDM2BQ8NHM5 1336 aa25.73■■□□□ 1.71
PRDM16-202ENST00000378389 TTLL6Q8N841 843 aa25.72■■□□□ 1.71
PRDM16-202ENST00000378389 NUDCQ9Y266 331 aa25.72■■□□□ 1.71
PRDM16-202ENST00000378389 PPP2R1AP30153 589 aa25.71■■□□□ 1.71
PRDM16-202ENST00000378389 TBC1D9BQ66K14 1250 aa25.71■■□□□ 1.71
PRDM16-202ENST00000378389 C2CD5Q86YS7 1000 aa25.7■■□□□ 1.7
PRDM16-202ENST00000378389 BRIP1Q9BX63 1249 aa25.7■■□□□ 1.7
PRDM16-202ENST00000378389 COL11A2P13942 1736 aaPredicted RBP25.69■■□□□ 1.7
PRDM16-202ENST00000378389 BTBD11A6QL63 1104 aa25.69■■□□□ 1.7
PRDM16-202ENST00000378389 H0YIN7 160 aa25.69■■□□□ 1.7
PRDM16-202ENST00000378389 CAMTA2O94983 1202 aa25.69■■□□□ 1.7
PRDM16-202ENST00000378389 FSTL1Q12841 308 aa25.69■■□□□ 1.7
PRDM16-202ENST00000378389 KCNQ3O43525 872 aa25.68■■□□□ 1.7
PRDM16-202ENST00000378389 HTATSF1O43719 755 aaKnown RBP25.68■■□□□ 1.7
PRDM16-202ENST00000378389 LMNB1P20700 586 aa25.68■■□□□ 1.7
PRDM16-202ENST00000378389 PRELPP51888 382 aa25.68■■□□□ 1.7
PRDM16-202ENST00000378389 DNAJC5GQ8N7S2 189 aa25.68■■□□□ 1.7
PRDM16-202ENST00000378389 RGL2O15211 777 aa25.67■■□□□ 1.7
PRDM16-202ENST00000378389 A1BGP04217 495 aa25.67■■□□□ 1.7
PRDM16-202ENST00000378389 RASSF7Q02833 373 aa25.67■■□□□ 1.7
PRDM16-202ENST00000378389 PRR5LQ6MZQ0 368 aa25.67■■□□□ 1.7
PRDM16-202ENST00000378389 WDR90Q96KV7 1748 aa25.67■■□□□ 1.7
PRDM16-202ENST00000378389 NFKBIEO00221 500 aa25.66■■□□□ 1.7
PRDM16-202ENST00000378389 PDE6BP35913 854 aa25.66■■□□□ 1.7
PRDM16-202ENST00000378389 CNGB1Q14028 1251 aaPredicted RBP25.66■■□□□ 1.7
PRDM16-202ENST00000378389 TBC1D2BQ9UPU7 963 aa25.66■■□□□ 1.7
PRDM16-202ENST00000378389 TIAM2Q8IVF5 1701 aa25.66■■□□□ 1.7
PRDM16-202ENST00000378389 BICDL1Q6ZP65 573 aa25.65■■□□□ 1.7
PRDM16-202ENST00000378389 FER1L6Q2WGJ9 1857 aa25.65■■□□□ 1.7
PRDM16-202ENST00000378389 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.7
PRDM16-202ENST00000378389 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.7
PRDM16-202ENST00000378389 IFFO2Q5TF58 517 aa25.64■■□□□ 1.7
PRDM16-202ENST00000378389 USP16Q9Y5T5 823 aa25.64■■□□□ 1.7
PRDM16-202ENST00000378389 ARFGEF2Q9Y6D5 1785 aa25.64■■□□□ 1.69
PRDM16-202ENST00000378389 CLEC4GQ6UXB4 293 aa25.63■■□□□ 1.69
PRDM16-202ENST00000378389 C16orf71Q8IYS4 520 aaPredicted RBP25.63■■□□□ 1.69
PRDM16-202ENST00000378389 CCDC88AQ3V6T2 1871 aa25.63■■□□□ 1.69
PRDM16-202ENST00000378389 DICER1Q9UPY3 1922 aaKnown RBP25.63■■□□□ 1.69
PRDM16-202ENST00000378389 GLTPD2A6NH11 291 aa25.62■■□□□ 1.69
PRDM16-202ENST00000378389 SNRPA1P09661 255 aaKnown RBP25.62■■□□□ 1.69
PRDM16-202ENST00000378389 SETDB2Q96T68 719 aa25.62■■□□□ 1.69
PRDM16-202ENST00000378389 LTBP3Q9NS15 1303 aa25.62■■□□□ 1.69
PRDM16-202ENST00000378389 DZIP3Q86Y13 1208 aaKnown RBP25.61■■□□□ 1.69
PRDM16-202ENST00000378389 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
PRDM16-202ENST00000378389 RRAGCQ9HB90 399 aa25.61■■□□□ 1.69
PRDM16-202ENST00000378389 MCM10Q7L590 875 aa25.6■■□□□ 1.69
PRDM16-202ENST00000378389 CNBD1Q8NA66 436 aa25.6■■□□□ 1.69
PRDM16-202ENST00000378389 STYK1Q6J9G0 422 aa25.59■■□□□ 1.69
PRDM16-202ENST00000378389 NPM2Q86SE8 214 aaKnown RBP25.59■■□□□ 1.69
PRDM16-202ENST00000378389 ZNF330Q9Y3S2 320 aaPredicted RBP25.59■■□□□ 1.69
PRDM16-202ENST00000378389 LAMB4A4D0S4 1761 aa25.58■■□□□ 1.69
PRDM16-202ENST00000378389 PRAMEF22A3QJZ6 481 aa25.57■■□□□ 1.68
PRDM16-202ENST00000378389 SRGNP10124 158 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms