RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 CSB-PGBD3P0DP91 1061 aa16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 CHMLP26374 656 aa16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 CAVIN1Q6NZI2 390 aaKnown RBP16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 GRPEL1Q9HAV7 217 aa16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 CIZ1Q9ULV3 898 aaPredicted RBP16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 RBM27Q9P2N5 1060 aaKnown RBP16.9■□□□□ 0.3
PCDHA6-201ENST00000378126 CPA1P15085 419 aa16.89■□□□□ 0.29
PCDHA6-201ENST00000378126 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
PCDHA6-201ENST00000378126 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.29
PCDHA6-201ENST00000378126 RNMTO43148 476 aaKnown RBP16.88■□□□□ 0.29
PCDHA6-201ENST00000378126 TMX3Q96JJ7 454 aa16.88■□□□□ 0.29
PCDHA6-201ENST00000378126 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
PCDHA6-201ENST00000378126 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
PCDHA6-201ENST00000378126 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
PCDHA6-201ENST00000378126 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
PCDHA6-201ENST00000378126 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
PCDHA6-201ENST00000378126 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
PCDHA6-201ENST00000378126 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
PCDHA6-201ENST00000378126 PXDNQ92626 1479 aa16.85■□□□□ 0.29
PCDHA6-201ENST00000378126 MCCP23508 829 aa16.85■□□□□ 0.29
PCDHA6-201ENST00000378126 ARHGEF25Q86VW2 580 aa16.85■□□□□ 0.29
PCDHA6-201ENST00000378126 SSH3Q8TE77 659 aa16.85■□□□□ 0.29
PCDHA6-201ENST00000378126 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
PCDHA6-201ENST00000378126 OSBPL3Q9H4L5 887 aa16.85■□□□□ 0.29
PCDHA6-201ENST00000378126 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
PCDHA6-201ENST00000378126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
PCDHA6-201ENST00000378126 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
PCDHA6-201ENST00000378126 MRE11P49959 708 aa16.84■□□□□ 0.29
PCDHA6-201ENST00000378126 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
PCDHA6-201ENST00000378126 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.29
PCDHA6-201ENST00000378126 ADCY9O60503 1353 aa16.83■□□□□ 0.28
PCDHA6-201ENST00000378126 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
PCDHA6-201ENST00000378126 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
PCDHA6-201ENST00000378126 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.28
PCDHA6-201ENST00000378126 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
PCDHA6-201ENST00000378126 NUCB2P80303 420 aa16.82■□□□□ 0.28
PCDHA6-201ENST00000378126 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
PCDHA6-201ENST00000378126 NDUFB9Q9Y6M9 179 aa16.82■□□□□ 0.28
PCDHA6-201ENST00000378126 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
PCDHA6-201ENST00000378126 AACSQ86V21 672 aa16.81■□□□□ 0.28
PCDHA6-201ENST00000378126 XRN1Q8IZH2 1706 aaKnown RBP16.81■□□□□ 0.28
PCDHA6-201ENST00000378126 PI4K2BQ8TCG2 481 aa16.81■□□□□ 0.28
PCDHA6-201ENST00000378126 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 IFIT2P09913 472 aaKnown RBP16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 FAM43AQ8N2R8 423 aa16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 SUCLG2Q96I99 432 aa16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 CLASRPQ8N2M8 674 aaKnown RBP16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
PCDHA6-201ENST00000378126 TLR7Q9NYK1 1049 aaKnown RBP16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 LTN1O94822 1766 aa16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 HSPA2P54652 639 aa16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 RNF214Q8ND24 703 aa16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 LMBRD1Q9NUN5 540 aa16.79■□□□□ 0.28
PCDHA6-201ENST00000378126 KCNJ4P48050 445 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 EDC3Q96F86 508 aaKnown RBP16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 MYD88Q99836 296 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 POLA2Q14181 598 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 ADGRL3Q9HAR2 1447 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 ATF3P18847 181 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 KSR2Q6VAB6 950 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 STAP2Q9UGK3 403 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 CHMP3Q9Y3E7 222 aa16.78■□□□□ 0.28
PCDHA6-201ENST00000378126 GPT2Q8TD30 523 aa16.77■□□□□ 0.28
PCDHA6-201ENST00000378126 PRPF40BQ6NWY9 871 aaKnown RBP16.77■□□□□ 0.27
PCDHA6-201ENST00000378126 ZNF496Q96IT1 587 aaPredicted RBP16.77■□□□□ 0.27
PCDHA6-201ENST00000378126 USP16Q9Y5T5 823 aa16.77■□□□□ 0.27
PCDHA6-201ENST00000378126 PTH1RQ03431 593 aa16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 SYCE3A1L190 88 aa16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 RAB11FIP3O75154 756 aa16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 KLHL40Q2TBA0 621 aa16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 ZSCAN23Q3MJ62 389 aa16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 MPNDQ8N594 471 aa16.76■□□□□ 0.27
PCDHA6-201ENST00000378126 NPHP4O75161 1426 aaPredicted RBP16.75■□□□□ 0.27
PCDHA6-201ENST00000378126 MARF1Q9Y4F3 1742 aaKnown RBP16.75■□□□□ 0.27
PCDHA6-201ENST00000378126 CHGBP05060 677 aa16.75■□□□□ 0.27
PCDHA6-201ENST00000378126 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms