RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 DIP2CQ9Y2E4 1556 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 ALDH1L1O75891 902 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 IFIT5Q13325 482 aaKnown RBP17.39■□□□□ 0.37
TCOF1-202ENST00000377797 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 RHPN1Q8TCX5 695 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 UPF3BQ9BZI7 483 aaKnown RBP17.39■□□□□ 0.37
TCOF1-202ENST00000377797 ECHDC1Q9NTX5 307 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 USP6P35125 1406 aa17.39■□□□□ 0.37
TCOF1-202ENST00000377797 GRM8O00222 908 aa17.38■□□□□ 0.37
TCOF1-202ENST00000377797 CEP85Q6P2H3 762 aa17.38■□□□□ 0.37
TCOF1-202ENST00000377797 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
TCOF1-202ENST00000377797 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
TCOF1-202ENST00000377797 LINS1Q8NG48 757 aa17.38■□□□□ 0.37
TCOF1-202ENST00000377797 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
TCOF1-202ENST00000377797 DCTPP1Q9H773 170 aa17.38■□□□□ 0.37
TCOF1-202ENST00000377797 TRMT2AQ8IZ69 625 aaKnown RBP17.38■□□□□ 0.37
TCOF1-202ENST00000377797 ZNF652Q9Y2D9 606 aa17.38■□□□□ 0.37
TCOF1-202ENST00000377797 PPRC1Q5VV67 1664 aaKnown RBP17.37■□□□□ 0.37
TCOF1-202ENST00000377797 RASSF8Q8NHQ8 419 aa17.37■□□□□ 0.37
TCOF1-202ENST00000377797 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
TCOF1-202ENST00000377797 BABAM1Q9NWV8 329 aa17.37■□□□□ 0.37
TCOF1-202ENST00000377797 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
TCOF1-202ENST00000377797 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
TCOF1-202ENST00000377797 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
TCOF1-202ENST00000377797 TMEM94Q12767 1356 aa17.37■□□□□ 0.37
TCOF1-202ENST00000377797 BLOC1S2Q6QNY1 142 aa17.37■□□□□ 0.37
TCOF1-202ENST00000377797 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
TCOF1-202ENST00000377797 SOS1Q07889 1333 aaPredicted RBP17.37■□□□□ 0.37
TCOF1-202ENST00000377797 IGHMBP2P38935 993 aaKnown RBP17.36■□□□□ 0.37
TCOF1-202ENST00000377797 CWF19L2Q2TBE0 894 aaKnown RBP17.36■□□□□ 0.37
TCOF1-202ENST00000377797 TRAK2O60296 914 aa17.36■□□□□ 0.37
TCOF1-202ENST00000377797 BICD2Q8TD16 824 aa17.36■□□□□ 0.37
TCOF1-202ENST00000377797 BTG4Q9NY30 223 aa17.36■□□□□ 0.37
TCOF1-202ENST00000377797 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
TCOF1-202ENST00000377797 KIDINS220Q9ULH0 1771 aa17.36■□□□□ 0.37
TCOF1-202ENST00000377797 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
TCOF1-202ENST00000377797 CWC22Q9HCG8 908 aaKnown RBP17.36■□□□□ 0.37
TCOF1-202ENST00000377797 GLI2P10070 1586 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 PDE1AP54750 535 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 TBC1D32Q96NH3 1257 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 KIAA2012Q0VF49 1180 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 TBC1D2Q9BYX2 928 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
TCOF1-202ENST00000377797 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
TCOF1-202ENST00000377797 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
TCOF1-202ENST00000377797 SDSP20132 328 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
TCOF1-202ENST00000377797 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
TCOF1-202ENST00000377797 PDCP20941 246 aa17.34■□□□□ 0.37
TCOF1-202ENST00000377797 DDB1Q16531 1140 aa17.34■□□□□ 0.37
TCOF1-202ENST00000377797 RRP12Q5JTH9 1297 aaKnown RBP17.34■□□□□ 0.37
TCOF1-202ENST00000377797 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.34■□□□□ 0.37
TCOF1-202ENST00000377797 STK3Q13188 491 aa17.34■□□□□ 0.37
TCOF1-202ENST00000377797 ACSBG1Q96GR2 724 aa17.34■□□□□ 0.37
TCOF1-202ENST00000377797 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.37
TCOF1-202ENST00000377797 LMTK3Q96Q04 1460 aa17.33■□□□□ 0.36
TCOF1-202ENST00000377797 ANKRD1Q15327 319 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 PDRG1Q9NUG6 133 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 PRPF40BQ6NWY9 871 aaKnown RBP17.32■□□□□ 0.36
TCOF1-202ENST00000377797 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 ZPR1O75312 459 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 HOXB7P09629 217 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 RAD21O60216 631 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 SART3Q15020 963 aaKnown RBP17.32■□□□□ 0.36
TCOF1-202ENST00000377797 LDHAL6AQ6ZMR3 332 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-202ENST00000377797 KDM2BQ8NHM5 1336 aa17.32■□□□□ 0.36
TCOF1-202ENST00000377797 PRPF40AO75400 957 aaKnown RBP17.31■□□□□ 0.36
TCOF1-202ENST00000377797 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
TCOF1-202ENST00000377797 TPM4P67936 248 aa17.31■□□□□ 0.36
TCOF1-202ENST00000377797 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
TCOF1-202ENST00000377797 ANKRD18BA2A2Z9 1011 aa17.31■□□□□ 0.36
TCOF1-202ENST00000377797 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
TCOF1-202ENST00000377797 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
TCOF1-202ENST00000377797 CAMSAP1Q5T5Y3 1602 aa17.31■□□□□ 0.36
TCOF1-202ENST00000377797 KRT32Q14532 448 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 NACAP1Q9BZK3 213 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 USP19O94966 1318 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 LRP2BPQ9P2M1 347 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 CTNNA3Q9UI47 895 aa17.3■□□□□ 0.36
TCOF1-202ENST00000377797 DHX16O60231 1041 aaKnown RBP17.29■□□□□ 0.36
TCOF1-202ENST00000377797 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
TCOF1-202ENST00000377797 TRIM34Q9BYJ4 488 aa17.29■□□□□ 0.36
TCOF1-202ENST00000377797 ABCF2Q9UG63 623 aa17.29■□□□□ 0.36
TCOF1-202ENST00000377797 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
TCOF1-202ENST00000377797 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
TCOF1-202ENST00000377797 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
TCOF1-202ENST00000377797 SLC52A2Q9HAB3 445 aa17.29■□□□□ 0.36
TCOF1-202ENST00000377797 FIBPO43427 364 aa17.28■□□□□ 0.36
TCOF1-202ENST00000377797 MARCH6O60337 910 aa17.28■□□□□ 0.36
TCOF1-202ENST00000377797 KDM4AO75164 1064 aa17.28■□□□□ 0.36
TCOF1-202ENST00000377797 CHAF1AQ13111 956 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms