RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 MYH14Q7Z406 1995 aaKnown RBP20.47■□□□□ 0.87
UCHL3-201ENST00000377595 PRKAR2BP31323 418 aa20.47■□□□□ 0.87
UCHL3-201ENST00000377595 NFIXQ14938 502 aa20.47■□□□□ 0.87
UCHL3-201ENST00000377595 ZNF790Q6PG37 636 aa20.47■□□□□ 0.87
UCHL3-201ENST00000377595 ZNF496Q96IT1 587 aaPredicted RBP20.47■□□□□ 0.87
UCHL3-201ENST00000377595 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
UCHL3-201ENST00000377595 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
UCHL3-201ENST00000377595 TEX13AQ9BXU3 409 aaPredicted RBP20.46■□□□□ 0.87
UCHL3-201ENST00000377595 SCN11AQ9UI33 1791 aa20.46■□□□□ 0.87
UCHL3-201ENST00000377595 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
UCHL3-201ENST00000377595 COL15A1P39059 1388 aa20.45■□□□□ 0.86
UCHL3-201ENST00000377595 C4AP0C0L4 1744 aa20.44■□□□□ 0.86
UCHL3-201ENST00000377595 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
UCHL3-201ENST00000377595 A0A087WZG4 1122 aa20.44■□□□□ 0.86
UCHL3-201ENST00000377595 SERPINB2P05120 415 aa20.44■□□□□ 0.86
UCHL3-201ENST00000377595 EIF5P55010 431 aaKnown RBP20.44■□□□□ 0.86
UCHL3-201ENST00000377595 BICDL1Q6ZP65 573 aa20.44■□□□□ 0.86
UCHL3-201ENST00000377595 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
UCHL3-201ENST00000377595 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
UCHL3-201ENST00000377595 ZNF330Q9Y3S2 320 aaPredicted RBP20.44■□□□□ 0.86
UCHL3-201ENST00000377595 MRC1P22897 1456 aa20.43■□□□□ 0.86
UCHL3-201ENST00000377595 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
UCHL3-201ENST00000377595 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
UCHL3-201ENST00000377595 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
UCHL3-201ENST00000377595 TJP1Q07157 1748 aa20.42■□□□□ 0.86
UCHL3-201ENST00000377595 C9orf131Q5VYM1 1079 aa20.42■□□□□ 0.86
UCHL3-201ENST00000377595 NPM2Q86SE8 214 aaKnown RBP20.42■□□□□ 0.86
UCHL3-201ENST00000377595 KIF3CO14782 793 aa20.41■□□□□ 0.86
UCHL3-201ENST00000377595 KCNQ3O43525 872 aa20.41■□□□□ 0.86
UCHL3-201ENST00000377595 A1BGP04217 495 aa20.41■□□□□ 0.86
UCHL3-201ENST00000377595 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
UCHL3-201ENST00000377595 TBC1D2BQ9UPU7 963 aa20.41■□□□□ 0.86
UCHL3-201ENST00000377595 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
UCHL3-201ENST00000377595 N4BP2Q86UW6 1770 aaPredicted RBP20.4■□□□□ 0.86
UCHL3-201ENST00000377595 MCM10Q7L590 875 aa20.39■□□□□ 0.85
UCHL3-201ENST00000377595 HSPA6P17066 643 aa20.38■□□□□ 0.85
UCHL3-201ENST00000377595 KIF13BQ9NQT8 1826 aa20.38■□□□□ 0.85
UCHL3-201ENST00000377595 H0YIN7 160 aa20.37■□□□□ 0.85
UCHL3-201ENST00000377595 IL6STP40189 918 aaPredicted RBP20.37■□□□□ 0.85
UCHL3-201ENST00000377595 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
UCHL3-201ENST00000377595 C2CD5Q86YS7 1000 aa20.37■□□□□ 0.85
UCHL3-201ENST00000377595 RNF181Q9P0P0 153 aa20.37■□□□□ 0.85
UCHL3-201ENST00000377595 USP16Q9Y5T5 823 aa20.37■□□□□ 0.85
UCHL3-201ENST00000377595 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
UCHL3-201ENST00000377595 TTLL6Q8N841 843 aa20.36■□□□□ 0.85
UCHL3-201ENST00000377595 NMRK2Q9NPI5 230 aa20.36■□□□□ 0.85
UCHL3-201ENST00000377595 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
UCHL3-201ENST00000377595 KIAA1551Q9HCM1 1747 aa20.35■□□□□ 0.85
UCHL3-201ENST00000377595 ADAMTS7Q9UKP4 1686 aa20.35■□□□□ 0.85
UCHL3-201ENST00000377595 CCDC24Q8N4L8 307 aa20.34■□□□□ 0.85
UCHL3-201ENST00000377595 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
UCHL3-201ENST00000377595 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.85
UCHL3-201ENST00000377595 TOMM70O94826 608 aa20.33■□□□□ 0.85
UCHL3-201ENST00000377595 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.85
UCHL3-201ENST00000377595 PRAMEF22A3QJZ6 481 aa20.32■□□□□ 0.84
UCHL3-201ENST00000377595 NPHP1O15259 732 aa20.32■□□□□ 0.84
UCHL3-201ENST00000377595 NEFMP07197 916 aa20.32■□□□□ 0.84
UCHL3-201ENST00000377595 PIP4K2AP48426 406 aaPredicted RBP20.32■□□□□ 0.84
UCHL3-201ENST00000377595 ZNF622Q969S3 477 aaKnown RBP eCLIP20.32■□□□□ 0.84
UCHL3-201ENST00000377595 BRIP1Q9BX63 1249 aa20.32■□□□□ 0.84
UCHL3-201ENST00000377595 CAMTA2O94983 1202 aa20.31■□□□□ 0.84
UCHL3-201ENST00000377595 PDE6BP35913 854 aa20.31■□□□□ 0.84
UCHL3-201ENST00000377595 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
UCHL3-201ENST00000377595 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
UCHL3-201ENST00000377595 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
UCHL3-201ENST00000377595 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
UCHL3-201ENST00000377595 RASSF7Q02833 373 aa20.3■□□□□ 0.84
UCHL3-201ENST00000377595 RRAGCQ9HB90 399 aa20.3■□□□□ 0.84
UCHL3-201ENST00000377595 MIS18AQ9NYP9 233 aa20.3■□□□□ 0.84
UCHL3-201ENST00000377595 PRR5LQ6MZQ0 368 aa20.29■□□□□ 0.84
UCHL3-201ENST00000377595 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
UCHL3-201ENST00000377595 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
UCHL3-201ENST00000377595 CARMIL3Q8ND23 1372 aa20.28■□□□□ 0.84
UCHL3-201ENST00000377595 LMNB1P20700 586 aa20.27■□□□□ 0.84
UCHL3-201ENST00000377595 CNBD1Q8NA66 436 aa20.27■□□□□ 0.84
UCHL3-201ENST00000377595 UBR2Q8IWV8 1755 aa20.26■□□□□ 0.83
UCHL3-201ENST00000377595 C21orf2O43822 256 aa20.25■□□□□ 0.83
UCHL3-201ENST00000377595 APLP1P51693 650 aa20.25■□□□□ 0.83
UCHL3-201ENST00000377595 ST5P78524 1137 aa20.25■□□□□ 0.83
UCHL3-201ENST00000377595 CLEC4GQ6UXB4 293 aa20.25■□□□□ 0.83
UCHL3-201ENST00000377595 RBM46Q8TBY0 533 aaKnown RBP20.25■□□□□ 0.83
UCHL3-201ENST00000377595 NBPF26B4DH59 902 aa20.24■□□□□ 0.83
UCHL3-201ENST00000377595 PRELPP51888 382 aa20.24■□□□□ 0.83
UCHL3-201ENST00000377595 NBPF10Q6P3W6 841 aaKnown RBP20.24■□□□□ 0.83
UCHL3-201ENST00000377595 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
UCHL3-201ENST00000377595 NBPF15Q8N660 670 aa20.24■□□□□ 0.83
UCHL3-201ENST00000377595 PNNQ9H307 717 aaKnown RBP20.24■□□□□ 0.83
UCHL3-201ENST00000377595 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
UCHL3-201ENST00000377595 VIRMAQ69YN4 1812 aaKnown RBP20.23■□□□□ 0.83
UCHL3-201ENST00000377595 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
UCHL3-201ENST00000377595 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
UCHL3-201ENST00000377595 NFE2L2Q16236 605 aa20.22■□□□□ 0.83
UCHL3-201ENST00000377595 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
UCHL3-201ENST00000377595 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
UCHL3-201ENST00000377595 BRCA1P38398 1863 aaKnown RBP20.22■□□□□ 0.83
UCHL3-201ENST00000377595 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
UCHL3-201ENST00000377595 GLTPD2A6NH11 291 aa20.21■□□□□ 0.83
UCHL3-201ENST00000377595 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
UCHL3-201ENST00000377595 NFKBIEO00221 500 aa20.21■□□□□ 0.83
UCHL3-201ENST00000377595 STYK1Q6J9G0 422 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms