RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
SF1-205ENST00000377394 TMX3Q96JJ7 454 aa16.8■□□□□ 0.28
SF1-205ENST00000377394 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
SF1-205ENST00000377394 BABAM1Q9NWV8 329 aa16.8■□□□□ 0.28
SF1-205ENST00000377394 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
SF1-205ENST00000377394 PALD1Q9ULE6 856 aa16.79■□□□□ 0.28
SF1-205ENST00000377394 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
SF1-205ENST00000377394 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
SF1-205ENST00000377394 RNF214Q8ND24 703 aa16.79■□□□□ 0.28
SF1-205ENST00000377394 GPT2Q8TD30 523 aa16.79■□□□□ 0.28
SF1-205ENST00000377394 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
SF1-205ENST00000377394 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
SF1-205ENST00000377394 ANKARQ7Z5J8 1434 aa16.78■□□□□ 0.28
SF1-205ENST00000377394 ZNF710Q8N1W2 664 aa16.78■□□□□ 0.28
SF1-205ENST00000377394 IL17RAQ96F46 866 aa16.78■□□□□ 0.28
SF1-205ENST00000377394 CACNA1FO60840 1977 aa16.78■□□□□ 0.28
SF1-205ENST00000377394 UNC5CLQ8IV45 518 aa16.78■□□□□ 0.28
SF1-205ENST00000377394 ANAPC15P60006 121 aa16.77■□□□□ 0.28
SF1-205ENST00000377394 CUL4AQ13619 759 aa16.77■□□□□ 0.28
SF1-205ENST00000377394 SRCIN1Q9C0H9 1055 aa16.77■□□□□ 0.28
SF1-205ENST00000377394 USP54Q70EL1 1684 aa16.77■□□□□ 0.28
SF1-205ENST00000377394 SYCE3A1L190 88 aa16.77■□□□□ 0.27
SF1-205ENST00000377394 MCM2P49736 904 aa16.77■□□□□ 0.27
SF1-205ENST00000377394 RILPL2Q969X0 211 aa16.77■□□□□ 0.27
SF1-205ENST00000377394 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.27
SF1-205ENST00000377394 TRIM6-TRIM34B2RNG4 842 aa16.76■□□□□ 0.27
SF1-205ENST00000377394 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
SF1-205ENST00000377394 AOX1Q06278 1338 aa16.76■□□□□ 0.27
SF1-205ENST00000377394 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
SF1-205ENST00000377394 MCCP23508 829 aa16.75■□□□□ 0.27
SF1-205ENST00000377394 BBXQ8WY36 941 aaPredicted RBP16.75■□□□□ 0.27
SF1-205ENST00000377394 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
SF1-205ENST00000377394 ANO2Q9NQ90 1003 aa16.75■□□□□ 0.27
SF1-205ENST00000377394 TMEM63CQ9P1W3 806 aa16.75■□□□□ 0.27
SF1-205ENST00000377394 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
SF1-205ENST00000377394 ATP2B3Q16720 1220 aa16.75■□□□□ 0.27
SF1-205ENST00000377394 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
SF1-205ENST00000377394 DNTTIP2Q5QJE6 756 aaKnown RBP16.75■□□□□ 0.27
SF1-205ENST00000377394 BRD1O95696 1058 aa16.74■□□□□ 0.27
SF1-205ENST00000377394 MCM5P33992 734 aa16.74■□□□□ 0.27
SF1-205ENST00000377394 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
SF1-205ENST00000377394 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
SF1-205ENST00000377394 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
SF1-205ENST00000377394 IL25Q9H293 177 aa16.74■□□□□ 0.27
SF1-205ENST00000377394 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
SF1-205ENST00000377394 KCNA6P17658 529 aa16.73■□□□□ 0.27
SF1-205ENST00000377394 POLA2Q14181 598 aa16.73■□□□□ 0.27
SF1-205ENST00000377394 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
SF1-205ENST00000377394 IL1RAPL2Q9NP60 686 aa16.73■□□□□ 0.27
SF1-205ENST00000377394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.73■□□□□ 0.278e-9■□□□□ 10.7
SF1-205ENST00000377394 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
SF1-205ENST00000377394 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
SF1-205ENST00000377394 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
SF1-205ENST00000377394 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
SF1-205ENST00000377394 INTS4Q96HW7 963 aaKnown RBP16.73■□□□□ 0.27
SF1-205ENST00000377394 PTMAP06454 111 aaKnown RBP16.72■□□□□ 0.27
SF1-205ENST00000377394 PPP1R42Q7Z4L9 355 aa16.72■□□□□ 0.27
SF1-205ENST00000377394 C17orf53Q8N3J3 647 aaPredicted RBP16.72■□□□□ 0.27
SF1-205ENST00000377394 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
SF1-205ENST00000377394 IGSF3O75054 1194 aa16.72■□□□□ 0.27
SF1-205ENST00000377394 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
SF1-205ENST00000377394 RAB11FIP3O75154 756 aa16.71■□□□□ 0.27
SF1-205ENST00000377394 PDE4CQ08493 712 aa16.71■□□□□ 0.27
SF1-205ENST00000377394 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
SF1-205ENST00000377394 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.27
SF1-205ENST00000377394 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
SF1-205ENST00000377394 SPDYE4A6NLX3 237 aa16.71■□□□□ 0.26
SF1-205ENST00000377394 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.26
SF1-205ENST00000377394 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.26
SF1-205ENST00000377394 EIF4A1P60842 406 aaKnown RBP16.7■□□□□ 0.26
SF1-205ENST00000377394 KIAA2012Q0VF49 1180 aa16.7■□□□□ 0.26
SF1-205ENST00000377394 MED1Q15648 1581 aaPredicted RBP16.7■□□□□ 0.26
SF1-205ENST00000377394 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
SF1-205ENST00000377394 HSPA4P34932 840 aa16.7■□□□□ 0.26
SF1-205ENST00000377394 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
SF1-205ENST00000377394 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
SF1-205ENST00000377394 NOL8Q76FK4 1167 aaKnown RBP16.69■□□□□ 0.26
SF1-205ENST00000377394 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
SF1-205ENST00000377394 LGR6Q9HBX8 967 aa16.69■□□□□ 0.26
SF1-205ENST00000377394 IP6K1Q92551 441 aa16.68■□□□□ 0.26
SF1-205ENST00000377394 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
SF1-205ENST00000377394 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
SF1-205ENST00000377394 MBD3O95983 291 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
SF1-205ENST00000377394 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 LTN1O94822 1766 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 SGSM2O43147 1006 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 HOXB7P09629 217 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
SF1-205ENST00000377394 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
SF1-205ENST00000377394 KCNQ3O43525 872 aa16.66■□□□□ 0.26
SF1-205ENST00000377394 NFAT5O94916 1531 aa16.66■□□□□ 0.26
SF1-205ENST00000377394 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
SF1-205ENST00000377394 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
SF1-205ENST00000377394 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
SF1-205ENST00000377394 RAD50Q92878 1312 aa16.66■□□□□ 0.26
SF1-205ENST00000377394 PI4KAP2A4QPH2 592 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms