RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ARHGAP27Q6ZUM4 889 aa25.94■■□□□ 1.74
CBWD3-204ENST00000377349 NPC1L1Q9UHC9 1359 aa25.93■■□□□ 1.74
CBWD3-204ENST00000377349 USPL1Q5W0Q7 1092 aa25.92■■□□□ 1.74
CBWD3-204ENST00000377349 ZBTB1Q9Y2K1 713 aa25.91■■□□□ 1.74
CBWD3-204ENST00000377349 COL15A1P39059 1388 aa25.91■■□□□ 1.74
CBWD3-204ENST00000377349 PIM2Q9P1W9 311 aa25.9■■□□□ 1.74
CBWD3-204ENST00000377349 CCDC88AQ3V6T2 1871 aa25.89■■□□□ 1.74
CBWD3-204ENST00000377349 CHRNA5P30532 468 aa25.89■■□□□ 1.74
CBWD3-204ENST00000377349 VSIG10Q8N0Z9 540 aa25.88■■□□□ 1.73
CBWD3-204ENST00000377349 BCL2L12Q9HB09 334 aa25.88■■□□□ 1.73
CBWD3-204ENST00000377349 NARFQ9UHQ1 456 aa25.88■■□□□ 1.73
CBWD3-204ENST00000377349 ANKRD31Q8N7Z5 1873 aa25.88■■□□□ 1.73
CBWD3-204ENST00000377349 ZPR1O75312 459 aa25.88■■□□□ 1.73
CBWD3-204ENST00000377349 NFIXQ14938 502 aa25.87■■□□□ 1.73
CBWD3-204ENST00000377349 DALRD3Q5D0E6 543 aaKnown RBP25.87■■□□□ 1.73
CBWD3-204ENST00000377349 SCN7AQ01118 1682 aa25.86■■□□□ 1.73
CBWD3-204ENST00000377349 C9orf131Q5VYM1 1079 aa25.86■■□□□ 1.73
CBWD3-204ENST00000377349 NMRK2Q9NPI5 230 aa25.86■■□□□ 1.73
CBWD3-204ENST00000377349 IL17REQ8NFR9 667 aa25.84■■□□□ 1.73
CBWD3-204ENST00000377349 TNRC6CQ9HCJ0 1690 aaKnown RBP25.82■■□□□ 1.72
CBWD3-204ENST00000377349 TOMM70O94826 608 aa25.81■■□□□ 1.72
CBWD3-204ENST00000377349 EIF5P55010 431 aaKnown RBP25.8■■□□□ 1.72
CBWD3-204ENST00000377349 ZNF496Q96IT1 587 aaPredicted RBP25.8■■□□□ 1.72
CBWD3-204ENST00000377349 CARMIL3Q8ND23 1372 aa25.8■■□□□ 1.72
CBWD3-204ENST00000377349 COL11A2P13942 1736 aaPredicted RBP25.8■■□□□ 1.72
CBWD3-204ENST00000377349 U2SURPO15042 1029 aaKnown RBP25.8■■□□□ 1.72
CBWD3-204ENST00000377349 CANXP27824 592 aaKnown RBP25.8■■□□□ 1.72
CBWD3-204ENST00000377349 WDR90Q96KV7 1748 aa25.79■■□□□ 1.72
CBWD3-204ENST00000377349 GNAT3A8MTJ3 354 aa25.79■■□□□ 1.72
CBWD3-204ENST00000377349 GAS2L2Q8NHY3 880 aa25.79■■□□□ 1.72
CBWD3-204ENST00000377349 CEMIPQ8WUJ3 1361 aa25.79■■□□□ 1.72
CBWD3-204ENST00000377349 HEG1Q9ULI3 1381 aa25.79■■□□□ 1.72
CBWD3-204ENST00000377349 BCORQ6W2J9 1755 aa25.79■■□□□ 1.72
CBWD3-204ENST00000377349 SERPINB2P05120 415 aa25.78■■□□□ 1.72
CBWD3-204ENST00000377349 ZNF790Q6PG37 636 aa25.78■■□□□ 1.72
CBWD3-204ENST00000377349 TIAM2Q8IVF5 1701 aa25.77■■□□□ 1.72
CBWD3-204ENST00000377349 TTC5Q8N0Z6 440 aa25.77■■□□□ 1.72
CBWD3-204ENST00000377349 RNF181Q9P0P0 153 aa25.77■■□□□ 1.72
CBWD3-204ENST00000377349 PHACTR3Q96KR7 559 aa25.76■■□□□ 1.71
CBWD3-204ENST00000377349 DICER1Q9UPY3 1922 aaKnown RBP25.76■■□□□ 1.71
CBWD3-204ENST00000377349 PCNTO95613 3336 aa25.75■■□□□ 1.71
CBWD3-204ENST00000377349 STARD3NLO95772 234 aa25.75■■□□□ 1.71
CBWD3-204ENST00000377349 TEFQ10587 303 aa25.75■■□□□ 1.71
CBWD3-204ENST00000377349 CACNA1SQ13698 1873 aa25.75■■□□□ 1.71
CBWD3-204ENST00000377349 FER1L6Q2WGJ9 1857 aa25.75■■□□□ 1.71
CBWD3-204ENST00000377349 PRELPP51888 382 aa25.74■■□□□ 1.71
CBWD3-204ENST00000377349 RASSF7Q02833 373 aa25.74■■□□□ 1.71
CBWD3-204ENST00000377349 APLP1P51693 650 aa25.73■■□□□ 1.71
CBWD3-204ENST00000377349 RSPH6AQ9H0K4 717 aa25.73■■□□□ 1.71
CBWD3-204ENST00000377349 RBM46Q8TBY0 533 aaKnown RBP25.72■■□□□ 1.71
CBWD3-204ENST00000377349 KCNQ3O43525 872 aa25.71■■□□□ 1.71
CBWD3-204ENST00000377349 TBC1D9BQ66K14 1250 aa25.71■■□□□ 1.71
CBWD3-204ENST00000377349 DNAJC5GQ8N7S2 189 aa25.71■■□□□ 1.71
CBWD3-204ENST00000377349 A0A087WZG4 1122 aa25.71■■□□□ 1.71
CBWD3-204ENST00000377349 PRKAR2BP31323 418 aa25.71■■□□□ 1.71
CBWD3-204ENST00000377349 IFFO2Q5TF58 517 aa25.71■■□□□ 1.71
CBWD3-204ENST00000377349 BICDL1Q6ZP65 573 aa25.71■■□□□ 1.71
CBWD3-204ENST00000377349 ARFGEF2Q9Y6D5 1785 aa25.7■■□□□ 1.7
CBWD3-204ENST00000377349 C2CD5Q86YS7 1000 aa25.7■■□□□ 1.7
CBWD3-204ENST00000377349 TEX13AQ9BXU3 409 aaPredicted RBP25.7■■□□□ 1.7
CBWD3-204ENST00000377349 DLG5Q8TDM6 1919 aa25.7■■□□□ 1.7
CBWD3-204ENST00000377349 KDM2BQ8NHM5 1336 aa25.69■■□□□ 1.7
CBWD3-204ENST00000377349 IL6STP40189 918 aaPredicted RBP25.69■■□□□ 1.7
CBWD3-204ENST00000377349 TBC1D2BQ9UPU7 963 aa25.69■■□□□ 1.7
CBWD3-204ENST00000377349 SLX4Q8IY92 1834 aa25.69■■□□□ 1.7
CBWD3-204ENST00000377349 A1BGP04217 495 aa25.68■■□□□ 1.7
CBWD3-204ENST00000377349 TTLL6Q8N841 843 aa25.68■■□□□ 1.7
CBWD3-204ENST00000377349 FMNL2Q96PY5 1086 aa25.68■■□□□ 1.7
CBWD3-204ENST00000377349 ZC3H4Q9UPT8 1303 aaKnown RBP25.67■■□□□ 1.7
CBWD3-204ENST00000377349 RRAGCQ9HB90 399 aa25.67■■□□□ 1.7
CBWD3-204ENST00000377349 NFKBIEO00221 500 aa25.66■■□□□ 1.7
CBWD3-204ENST00000377349 PRR5LQ6MZQ0 368 aa25.66■■□□□ 1.7
CBWD3-204ENST00000377349 H0YIN7 160 aa25.65■■□□□ 1.7
CBWD3-204ENST00000377349 CAMTA2O94983 1202 aa25.65■■□□□ 1.7
CBWD3-204ENST00000377349 LMNB1P20700 586 aa25.65■■□□□ 1.7
CBWD3-204ENST00000377349 BTBD11A6QL63 1104 aa25.64■■□□□ 1.7
CBWD3-204ENST00000377349 PPP2R1AP30153 589 aa25.64■■□□□ 1.7
CBWD3-204ENST00000377349 CFAP53Q96M91 514 aa25.64■■□□□ 1.7
CBWD3-204ENST00000377349 ZNF330Q9Y3S2 320 aaPredicted RBP25.64■■□□□ 1.7
CBWD3-204ENST00000377349 CCDC24Q8N4L8 307 aa25.63■■□□□ 1.69
CBWD3-204ENST00000377349 BRIP1Q9BX63 1249 aa25.63■■□□□ 1.69
CBWD3-204ENST00000377349 PRAMEF22A3QJZ6 481 aa25.63■■□□□ 1.69
CBWD3-204ENST00000377349 FSTL1Q12841 308 aa25.63■■□□□ 1.69
CBWD3-204ENST00000377349 C16orf71Q8IYS4 520 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-204ENST00000377349 USP16Q9Y5T5 823 aa25.63■■□□□ 1.69
CBWD3-204ENST00000377349 HTRA3P83110 453 aa25.62■■□□□ 1.69
CBWD3-204ENST00000377349 LAMB4A4D0S4 1761 aa25.61■■□□□ 1.69
CBWD3-204ENST00000377349 MCM10Q7L590 875 aa25.61■■□□□ 1.69
CBWD3-204ENST00000377349 PIP4K2AP48426 406 aaPredicted RBP25.6■■□□□ 1.69
CBWD3-204ENST00000377349 GLTPD2A6NH11 291 aa25.59■■□□□ 1.69
CBWD3-204ENST00000377349 U2AF1L5P0DN76 240 aaPredicted RBP25.59■■□□□ 1.69
CBWD3-204ENST00000377349 U2AF1Q01081 240 aaKnown RBP eCLIP25.59■■□□□ 1.69
CBWD3-204ENST00000377349 NUDCQ9Y266 331 aa25.59■■□□□ 1.69
CBWD3-204ENST00000377349 KDM3BQ7LBC6 1761 aa25.59■■□□□ 1.69
CBWD3-204ENST00000377349 PDE6BP35913 854 aa25.58■■□□□ 1.69
CBWD3-204ENST00000377349 DZIP3Q86Y13 1208 aaKnown RBP25.58■■□□□ 1.69
CBWD3-204ENST00000377349 ZNF622Q969S3 477 aaKnown RBP eCLIP25.58■■□□□ 1.69
CBWD3-204ENST00000377349 PDZRN3Q9UPQ7 1066 aa25.58■■□□□ 1.69
CBWD3-204ENST00000377349 DCTN1Q14203 1278 aa25.57■■□□□ 1.68
CBWD3-204ENST00000377349 SETDB2Q96T68 719 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms