RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CLASRPQ8N2M8 674 aaKnown RBP15.65■□□□□ 0.1
USP11-204ENST00000377107 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
USP11-204ENST00000377107 PLEKHG1Q9ULL1 1385 aa15.65■□□□□ 0.1
USP11-204ENST00000377107 CNTROBQ8N137 903 aa15.64■□□□□ 0.09
USP11-204ENST00000377107 NLRP2Q9NX02 1062 aa15.64■□□□□ 0.09
USP11-204ENST00000377107 FIBPO43427 364 aa15.64■□□□□ 0.09
USP11-204ENST00000377107 TCEANC2Q96MN5 208 aa15.64■□□□□ 0.09
USP11-204ENST00000377107 PROSER3Q2NL68 480 aa15.64■□□□□ 0.09
USP11-204ENST00000377107 CEP170BQ9Y4F5 1589 aaPredicted RBP15.63■□□□□ 0.09
USP11-204ENST00000377107 VPS37CA5D8V6 355 aaPredicted RBP15.63■□□□□ 0.09
USP11-204ENST00000377107 AACSQ86V21 672 aa15.63■□□□□ 0.09
USP11-204ENST00000377107 KLHDC4Q8TBB5 520 aa15.63■□□□□ 0.09
USP11-204ENST00000377107 KIF1BPQ96EK5 621 aa15.63■□□□□ 0.09
USP11-204ENST00000377107 TMEM63CQ9P1W3 806 aa15.63■□□□□ 0.09
USP11-204ENST00000377107 CASTP20810 708 aaKnown RBP15.63■□□□□ 0.09
USP11-204ENST00000377107 CLCN1P35523 988 aa15.63■□□□□ 0.09
USP11-204ENST00000377107 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
USP11-204ENST00000377107 CCDC173Q0VFZ6 552 aa15.63■□□□□ 0.09
USP11-204ENST00000377107 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
USP11-204ENST00000377107 RIMBP3CA6NJZ7 1639 aa15.62■□□□□ 0.09
USP11-204ENST00000377107 RIMBP3BA6NNM3 1639 aa15.62■□□□□ 0.09
USP11-204ENST00000377107 RIMBP3Q9UFD9 1639 aa15.62■□□□□ 0.09
USP11-204ENST00000377107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.62■□□□□ 0.09
USP11-204ENST00000377107 RIC3Q7Z5B4 369 aa15.62■□□□□ 0.09
USP11-204ENST00000377107 ZNF330Q9Y3S2 320 aaPredicted RBP15.62■□□□□ 0.09
USP11-204ENST00000377107 RIMS1Q86UR5 1692 aaKnown RBP15.62■□□□□ 0.09
USP11-204ENST00000377107 EIF4A1P60842 406 aaKnown RBP15.61■□□□□ 0.09
USP11-204ENST00000377107 JAKMIP1Q96N16 626 aaKnown RBP15.61■□□□□ 0.09
USP11-204ENST00000377107 ISY1Q9ULR0 285 aaKnown RBP15.61■□□□□ 0.09
USP11-204ENST00000377107 CCDC83Q8IWF9 413 aa15.61■□□□□ 0.09
USP11-204ENST00000377107 BOLA2Q9H3K6 86 aa15.61■□□□□ 0.09
USP11-204ENST00000377107 SMC3Q9UQE7 1217 aa15.61■□□□□ 0.09
USP11-204ENST00000377107 AGLP35573 1532 aa15.61■□□□□ 0.09
USP11-204ENST00000377107 IBTKQ9P2D0 1353 aaPredicted RBP15.61■□□□□ 0.09
USP11-204ENST00000377107 GADD45BO75293 160 aaPredicted RBP15.61■□□□□ 0.09
USP11-204ENST00000377107 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
USP11-204ENST00000377107 NAP1L2Q9ULW6 460 aaPredicted RBP15.61■□□□□ 0.09
USP11-204ENST00000377107 USP31Q70CQ4 1352 aa15.61■□□□□ 0.09
USP11-204ENST00000377107 G3BP1Q13283 466 aaKnown RBP eCLIP15.6■□□□□ 0.092e-6■■■□□ 15.2
USP11-204ENST00000377107 DNTTIP2Q5QJE6 756 aaKnown RBP15.6■□□□□ 0.09
USP11-204ENST00000377107 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
USP11-204ENST00000377107 KNDC1Q76NI1 1749 aa15.6■□□□□ 0.09
USP11-204ENST00000377107 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
USP11-204ENST00000377107 FERMT3Q86UX7 667 aa15.6■□□□□ 0.09
USP11-204ENST00000377107 ANKLE2Q86XL3 938 aa15.6■□□□□ 0.09
USP11-204ENST00000377107 DDX17Q92841 729 aaKnown RBP15.6■□□□□ 0.09
USP11-204ENST00000377107 TECPR2O15040 1411 aa15.6■□□□□ 0.09
USP11-204ENST00000377107 NECAB1Q8N987 351 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 IP6K1Q92551 441 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 MCM2P49736 904 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 STK3Q13188 491 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 NRXN3Q9Y4C0 1643 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 FOSBP53539 338 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 ANKRD24Q8TF21 1146 aa15.59■□□□□ 0.09
USP11-204ENST00000377107 AK2P54819 239 aa15.58■□□□□ 0.08
USP11-204ENST00000377107 CNPY2Q9Y2B0 182 aa15.58■□□□□ 0.08
USP11-204ENST00000377107 NDUFB9Q9Y6M9 179 aa15.58■□□□□ 0.08
USP11-204ENST00000377107 GCP02774 474 aa15.58■□□□□ 0.08
USP11-204ENST00000377107 GPATCH3Q96I76 525 aa15.58■□□□□ 0.08
USP11-204ENST00000377107 DBF4Q9UBU7 674 aaPredicted RBP15.58■□□□□ 0.08
USP11-204ENST00000377107 R3HCC1Q9Y3T6 440 aaKnown RBP15.58■□□□□ 0.08
USP11-204ENST00000377107 USP48Q86UV5 1035 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 RAB11FIP3O75154 756 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 BEND3Q5T5X7 828 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 CABLES1Q8TDN4 633 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 FSD1Q9BTV5 496 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 PPFIA3O75145 1194 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 FGD1P98174 961 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 ITSN1Q15811 1721 aa15.57■□□□□ 0.08
USP11-204ENST00000377107 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.57■□□□□ 0.08
USP11-204ENST00000377107 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
USP11-204ENST00000377107 HSP90AB4PQ58FF6 505 aa15.56■□□□□ 0.08
USP11-204ENST00000377107 RAPGEF4Q8WZA2 1011 aa15.56■□□□□ 0.08
USP11-204ENST00000377107 CYP2E1P05181 493 aaPredicted RBP15.56■□□□□ 0.08
USP11-204ENST00000377107 PTH1RQ03431 593 aa15.56■□□□□ 0.08
USP11-204ENST00000377107 ZSCAN30Q86W11 494 aa15.56■□□□□ 0.08
USP11-204ENST00000377107 EDC3Q96F86 508 aaKnown RBP15.56■□□□□ 0.08
USP11-204ENST00000377107 KDRP35968 1356 aa15.56■□□□□ 0.08
USP11-204ENST00000377107 GLRX3O76003 335 aaKnown RBP15.55■□□□□ 0.08
USP11-204ENST00000377107 CHRNA2Q15822 529 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 SYAP1Q96A49 352 aaPredicted RBP15.55■□□□□ 0.08
USP11-204ENST00000377107 ATP5J2-PTCD1G3V325 749 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 SGSM2O43147 1006 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
USP11-204ENST00000377107 RBM10P98175 930 aaKnown RBP15.55■□□□□ 0.08
USP11-204ENST00000377107 PROSER2Q86WR7 435 aaPredicted RBP15.55■□□□□ 0.08
USP11-204ENST00000377107 RUFY2Q8WXA3 655 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 PDRG1Q9NUG6 133 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 WDR33Q9C0J8 1336 aaKnown RBP15.55■□□□□ 0.08
USP11-204ENST00000377107 MBD3O95983 291 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 FAM227BQ96M60 508 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 DNAJC2Q99543 621 aaKnown RBP15.55■□□□□ 0.08
USP11-204ENST00000377107 TSPY26PQ9H489 355 aa15.55■□□□□ 0.08
USP11-204ENST00000377107 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
USP11-204ENST00000377107 BRD1O95696 1058 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 ZKSCAN1P17029 563 aaPredicted RBP15.54■□□□□ 0.08
USP11-204ENST00000377107 PI4K2BQ8TCG2 481 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 MYD88Q99836 296 aa15.54■□□□□ 0.08
USP11-204ENST00000377107 ECHDC1Q9NTX5 307 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms