RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 SLC52A2Q9HAB3 445 aa17.91■□□□□ 0.46
CLCN6-205ENST00000376492 PRELPP51888 382 aa17.9■□□□□ 0.46
CLCN6-205ENST00000376492 SLC39A6Q13433 755 aa17.9■□□□□ 0.46
CLCN6-205ENST00000376492 NFIXQ14938 502 aa17.9■□□□□ 0.46
CLCN6-205ENST00000376492 LGR6Q9HBX8 967 aa17.9■□□□□ 0.46
CLCN6-205ENST00000376492 PCNTO95613 3336 aa17.9■□□□□ 0.46
CLCN6-205ENST00000376492 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
CLCN6-205ENST00000376492 MRC1P22897 1456 aa17.89■□□□□ 0.45
CLCN6-205ENST00000376492 SCN11AQ9UI33 1791 aa17.89■□□□□ 0.45
CLCN6-205ENST00000376492 CYP19A1P11511 503 aaPredicted RBP17.89■□□□□ 0.45
CLCN6-205ENST00000376492 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
CLCN6-205ENST00000376492 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
CLCN6-205ENST00000376492 COL15A1P39059 1388 aa17.89■□□□□ 0.45
CLCN6-205ENST00000376492 BCL2L12Q9HB09 334 aa17.88■□□□□ 0.45
CLCN6-205ENST00000376492 SMC1BQ8NDV3 1235 aa17.87■□□□□ 0.45
CLCN6-205ENST00000376492 CARMIL3Q8ND23 1372 aa17.87■□□□□ 0.45
CLCN6-205ENST00000376492 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
CLCN6-205ENST00000376492 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
CLCN6-205ENST00000376492 SBF1O95248 1867 aa17.85■□□□□ 0.45
CLCN6-205ENST00000376492 SERPINB2P05120 415 aa17.85■□□□□ 0.45
CLCN6-205ENST00000376492 HMOX1P09601 288 aa17.85■□□□□ 0.45
CLCN6-205ENST00000376492 LMNB1P20700 586 aa17.85■□□□□ 0.45
CLCN6-205ENST00000376492 NRXN2Q9P2S2 1712 aa17.84■□□□□ 0.45
CLCN6-205ENST00000376492 ZC3H4Q9UPT8 1303 aaKnown RBP17.84■□□□□ 0.45
CLCN6-205ENST00000376492 CAPN15O75808 1086 aa17.84■□□□□ 0.45
CLCN6-205ENST00000376492 KNSTRNQ9Y448 316 aa17.84■□□□□ 0.45
CLCN6-205ENST00000376492 AFDNP55196 1824 aaKnown RBP17.84■□□□□ 0.45
CLCN6-205ENST00000376492 GLTPD2A6NH11 291 aa17.83■□□□□ 0.44
CLCN6-205ENST00000376492 NFKBIEO00221 500 aa17.83■□□□□ 0.44
CLCN6-205ENST00000376492 C2CD5Q86YS7 1000 aa17.83■□□□□ 0.44
CLCN6-205ENST00000376492 TTLL6Q8N841 843 aa17.83■□□□□ 0.44
CLCN6-205ENST00000376492 CANXP27824 592 aaKnown RBP17.82■□□□□ 0.44
CLCN6-205ENST00000376492 MTHFSDQ2M296 383 aaKnown RBP17.82■□□□□ 0.44
CLCN6-205ENST00000376492 AMER1Q5JTC6 1135 aaPredicted RBP17.82■□□□□ 0.44
CLCN6-205ENST00000376492 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
CLCN6-205ENST00000376492 DLEC1Q9Y238 1755 aa17.81■□□□□ 0.44
CLCN6-205ENST00000376492 VEGFAP15692 232 aaPredicted RBP17.81■□□□□ 0.44
CLCN6-205ENST00000376492 TIAM2Q8IVF5 1701 aa17.81■□□□□ 0.44
CLCN6-205ENST00000376492 TNS4Q8IZW8 715 aa17.8■□□□□ 0.44
CLCN6-205ENST00000376492 H0YIN7 160 aa17.79■□□□□ 0.44
CLCN6-205ENST00000376492 VSIG10Q8N0Z9 540 aa17.79■□□□□ 0.44
CLCN6-205ENST00000376492 POTECB2RU33 542 aa17.78■□□□□ 0.44
CLCN6-205ENST00000376492 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
CLCN6-205ENST00000376492 CCDC24Q8N4L8 307 aa17.78■□□□□ 0.44
CLCN6-205ENST00000376492 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
CLCN6-205ENST00000376492 UBR2Q8IWV8 1755 aa17.77■□□□□ 0.44
CLCN6-205ENST00000376492 HSPA1AP0DMV8 641 aaKnown RBP17.77■□□□□ 0.44
CLCN6-205ENST00000376492 HSPA1BP0DMV9 641 aaKnown RBP17.77■□□□□ 0.44
CLCN6-205ENST00000376492 EIF5P55010 431 aaKnown RBP17.77■□□□□ 0.44
CLCN6-205ENST00000376492 C21orf2O43822 256 aa17.76■□□□□ 0.43
CLCN6-205ENST00000376492 TTC5Q8N0Z6 440 aa17.76■□□□□ 0.43
CLCN6-205ENST00000376492 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLCN6-205ENST00000376492 STARD3NLO95772 234 aa17.75■□□□□ 0.43
CLCN6-205ENST00000376492 ZNF496Q96IT1 587 aaPredicted RBP17.75■□□□□ 0.43
CLCN6-205ENST00000376492 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
CLCN6-205ENST00000376492 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
CLCN6-205ENST00000376492 SCN7AQ01118 1682 aa17.74■□□□□ 0.43
CLCN6-205ENST00000376492 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
CLCN6-205ENST00000376492 PRR5LQ6MZQ0 368 aa17.74■□□□□ 0.43
CLCN6-205ENST00000376492 TBC1D2BQ9UPU7 963 aa17.74■□□□□ 0.43
CLCN6-205ENST00000376492 VIRMAQ69YN4 1812 aaKnown RBP17.74■□□□□ 0.43
CLCN6-205ENST00000376492 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
CLCN6-205ENST00000376492 A0A087WZG4 1122 aa17.73■□□□□ 0.43
CLCN6-205ENST00000376492 ERFEQ4G0M1 354 aa17.73■□□□□ 0.43
CLCN6-205ENST00000376492 BRIP1Q9BX63 1249 aa17.73■□□□□ 0.43
CLCN6-205ENST00000376492 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
CLCN6-205ENST00000376492 KIF7Q2M1P5 1343 aa17.72■□□□□ 0.43
CLCN6-205ENST00000376492 CC2D1BQ5T0F9 858 aaKnown RBP17.72■□□□□ 0.43
CLCN6-205ENST00000376492 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
CLCN6-205ENST00000376492 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
CLCN6-205ENST00000376492 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
CLCN6-205ENST00000376492 POTEJP0CG39 1038 aa17.71■□□□□ 0.43
CLCN6-205ENST00000376492 PDE6BP35913 854 aa17.71■□□□□ 0.43
CLCN6-205ENST00000376492 ZNF790Q6PG37 636 aa17.71■□□□□ 0.43
CLCN6-205ENST00000376492 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
CLCN6-205ENST00000376492 TAOK3Q9H2K8 898 aa17.7■□□□□ 0.42
CLCN6-205ENST00000376492 CCDC88AQ3V6T2 1871 aa17.69■□□□□ 0.42
CLCN6-205ENST00000376492 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
CLCN6-205ENST00000376492 CAMTA2O94983 1202 aa17.69■□□□□ 0.42
CLCN6-205ENST00000376492 A1BGP04217 495 aa17.69■□□□□ 0.42
CLCN6-205ENST00000376492 TEFQ10587 303 aa17.69■□□□□ 0.42
CLCN6-205ENST00000376492 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
CLCN6-205ENST00000376492 PER1O15534 1290 aaPredicted RBP17.68■□□□□ 0.42
CLCN6-205ENST00000376492 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
CLCN6-205ENST00000376492 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
CLCN6-205ENST00000376492 MKRN1Q9UHC7 482 aaKnown RBP17.68■□□□□ 0.42
CLCN6-205ENST00000376492 PDZRN3Q9UPQ7 1066 aa17.68■□□□□ 0.42
CLCN6-205ENST00000376492 LTBP3Q9NS15 1303 aa17.68■□□□□ 0.42
CLCN6-205ENST00000376492 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
CLCN6-205ENST00000376492 GNAT3A8MTJ3 354 aa17.67■□□□□ 0.42
CLCN6-205ENST00000376492 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
CLCN6-205ENST00000376492 NPHP1O15259 732 aa17.67■□□□□ 0.42
CLCN6-205ENST00000376492 KCNQ3O43525 872 aa17.67■□□□□ 0.42
CLCN6-205ENST00000376492 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
CLCN6-205ENST00000376492 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
CLCN6-205ENST00000376492 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
CLCN6-205ENST00000376492 SETDB2Q96T68 719 aa17.67■□□□□ 0.42
CLCN6-205ENST00000376492 SRGNP10124 158 aa17.66■□□□□ 0.42
CLCN6-205ENST00000376492 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
CLCN6-205ENST00000376492 FMNL2Q96PY5 1086 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms