RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CHRNA5P30532 468 aa20.2■□□□□ 0.82
CLCN6-204ENST00000376491 PIM2Q9P1W9 311 aa20.2■□□□□ 0.82
CLCN6-204ENST00000376491 HSPA6P17066 643 aa20.19■□□□□ 0.82
CLCN6-204ENST00000376491 NARFQ9UHQ1 456 aa20.19■□□□□ 0.82
CLCN6-204ENST00000376491 COL15A1P39059 1388 aa20.19■□□□□ 0.82
CLCN6-204ENST00000376491 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
CLCN6-204ENST00000376491 BCL2L12Q9HB09 334 aa20.18■□□□□ 0.82
CLCN6-204ENST00000376491 NRXN2Q9P2S2 1712 aa20.17■□□□□ 0.82
CLCN6-204ENST00000376491 U2SURPO15042 1029 aaKnown RBP20.17■□□□□ 0.82
CLCN6-204ENST00000376491 NFIXQ14938 502 aa20.17■□□□□ 0.82
CLCN6-204ENST00000376491 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
CLCN6-204ENST00000376491 SIPA1L3O60292 1781 aaPredicted RBP20.16■□□□□ 0.82
CLCN6-204ENST00000376491 SBF1O95248 1867 aa20.16■□□□□ 0.82
CLCN6-204ENST00000376491 DALRD3Q5D0E6 543 aaKnown RBP20.16■□□□□ 0.82
CLCN6-204ENST00000376491 C9orf131Q5VYM1 1079 aa20.15■□□□□ 0.82
CLCN6-204ENST00000376491 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
CLCN6-204ENST00000376491 NMRK2Q9NPI5 230 aa20.14■□□□□ 0.81
CLCN6-204ENST00000376491 GNAT3A8MTJ3 354 aa20.13■□□□□ 0.81
CLCN6-204ENST00000376491 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
CLCN6-204ENST00000376491 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
CLCN6-204ENST00000376491 SERPINB2P05120 415 aa20.12■□□□□ 0.81
CLCN6-204ENST00000376491 EIF5P55010 431 aaKnown RBP20.12■□□□□ 0.81
CLCN6-204ENST00000376491 ZNF790Q6PG37 636 aa20.12■□□□□ 0.81
CLCN6-204ENST00000376491 TTC5Q8N0Z6 440 aa20.12■□□□□ 0.81
CLCN6-204ENST00000376491 DLEC1Q9Y238 1755 aa20.11■□□□□ 0.81
CLCN6-204ENST00000376491 HEG1Q9ULI3 1381 aa20.11■□□□□ 0.81
CLCN6-204ENST00000376491 TOMM70O94826 608 aa20.11■□□□□ 0.81
CLCN6-204ENST00000376491 TEFQ10587 303 aa20.11■□□□□ 0.81
CLCN6-204ENST00000376491 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
CLCN6-204ENST00000376491 STARD3NLO95772 234 aa20.1■□□□□ 0.81
CLCN6-204ENST00000376491 CARMIL3Q8ND23 1372 aa20.09■□□□□ 0.81
CLCN6-204ENST00000376491 CEMIPQ8WUJ3 1361 aa20.09■□□□□ 0.81
CLCN6-204ENST00000376491 RSPH6AQ9H0K4 717 aa20.09■□□□□ 0.81
CLCN6-204ENST00000376491 RNF181Q9P0P0 153 aa20.09■□□□□ 0.81
CLCN6-204ENST00000376491 KCNQ3O43525 872 aa20.08■□□□□ 0.81
CLCN6-204ENST00000376491 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
CLCN6-204ENST00000376491 BICDL1Q6ZP65 573 aa20.08■□□□□ 0.81
CLCN6-204ENST00000376491 ANKRD31Q8N7Z5 1873 aa20.07■□□□□ 0.8
CLCN6-204ENST00000376491 CCDC88AQ3V6T2 1871 aa20.07■□□□□ 0.8
CLCN6-204ENST00000376491 SCN7AQ01118 1682 aa20.07■□□□□ 0.8
CLCN6-204ENST00000376491 A0A087WZG4 1122 aa20.06■□□□□ 0.8
CLCN6-204ENST00000376491 RASSF7Q02833 373 aa20.06■□□□□ 0.8
CLCN6-204ENST00000376491 TBC1D9BQ66K14 1250 aa20.06■□□□□ 0.8
CLCN6-204ENST00000376491 TEX13AQ9BXU3 409 aaPredicted RBP20.06■□□□□ 0.8
CLCN6-204ENST00000376491 TBC1D2BQ9UPU7 963 aa20.06■□□□□ 0.8
CLCN6-204ENST00000376491 A1BGP04217 495 aa20.05■□□□□ 0.8
CLCN6-204ENST00000376491 PRELPP51888 382 aa20.05■□□□□ 0.8
CLCN6-204ENST00000376491 C2CD5Q86YS7 1000 aa20.05■□□□□ 0.8
CLCN6-204ENST00000376491 CFAP53Q96M91 514 aa20.05■□□□□ 0.8
CLCN6-204ENST00000376491 FMNL2Q96PY5 1086 aa20.05■□□□□ 0.8
CLCN6-204ENST00000376491 IL6STP40189 918 aaPredicted RBP20.04■□□□□ 0.8
CLCN6-204ENST00000376491 APLP1P51693 650 aa20.04■□□□□ 0.8
CLCN6-204ENST00000376491 TTLL6Q8N841 843 aa20.04■□□□□ 0.8
CLCN6-204ENST00000376491 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
CLCN6-204ENST00000376491 BTBD11A6QL63 1104 aa20.03■□□□□ 0.8
CLCN6-204ENST00000376491 PPP2R1AP30153 589 aa20.03■□□□□ 0.8
CLCN6-204ENST00000376491 RBM46Q8TBY0 533 aaKnown RBP20.03■□□□□ 0.8
CLCN6-204ENST00000376491 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
CLCN6-204ENST00000376491 RRAGCQ9HB90 399 aa20.02■□□□□ 0.8
CLCN6-204ENST00000376491 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.79
CLCN6-204ENST00000376491 TNRC6CQ9HCJ0 1690 aaKnown RBP20.01■□□□□ 0.79
CLCN6-204ENST00000376491 H0YIN7 160 aa20.01■□□□□ 0.79
CLCN6-204ENST00000376491 CAMTA2O94983 1202 aa20.01■□□□□ 0.79
CLCN6-204ENST00000376491 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
CLCN6-204ENST00000376491 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLCN6-204ENST00000376491 DNAJC5GQ8N7S2 189 aa20.01■□□□□ 0.79
CLCN6-204ENST00000376491 NUDCQ9Y266 331 aa20.01■□□□□ 0.79
CLCN6-204ENST00000376491 USP16Q9Y5T5 823 aa20.01■□□□□ 0.79
CLCN6-204ENST00000376491 COL11A2P13942 1736 aaPredicted RBP20.01■□□□□ 0.79
CLCN6-204ENST00000376491 BCORQ6W2J9 1755 aa20■□□□□ 0.79
CLCN6-204ENST00000376491 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
CLCN6-204ENST00000376491 PRR5LQ6MZQ0 368 aa20■□□□□ 0.79
CLCN6-204ENST00000376491 NFKBIEO00221 500 aa19.99■□□□□ 0.79
CLCN6-204ENST00000376491 LMNB1P20700 586 aa19.99■□□□□ 0.79
CLCN6-204ENST00000376491 PIP4K2AP48426 406 aaPredicted RBP19.99■□□□□ 0.79
CLCN6-204ENST00000376491 MCM10Q7L590 875 aa19.99■□□□□ 0.79
CLCN6-204ENST00000376491 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
CLCN6-204ENST00000376491 WDR90Q96KV7 1748 aa19.99■□□□□ 0.79
CLCN6-204ENST00000376491 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
CLCN6-204ENST00000376491 IFFO2Q5TF58 517 aa19.98■□□□□ 0.79
CLCN6-204ENST00000376491 BRIP1Q9BX63 1249 aa19.98■□□□□ 0.79
CLCN6-204ENST00000376491 ZC3H4Q9UPT8 1303 aaKnown RBP19.98■□□□□ 0.79
CLCN6-204ENST00000376491 TIAM2Q8IVF5 1701 aa19.97■□□□□ 0.79
CLCN6-204ENST00000376491 ZNF622Q969S3 477 aaKnown RBP eCLIP19.97■□□□□ 0.79
CLCN6-204ENST00000376491 FER1L6Q2WGJ9 1857 aa19.96■□□□□ 0.79
CLCN6-204ENST00000376491 PDE6BP35913 854 aa19.96■□□□□ 0.79
CLCN6-204ENST00000376491 FSTL1Q12841 308 aa19.96■□□□□ 0.79
CLCN6-204ENST00000376491 DZIP3Q86Y13 1208 aaKnown RBP19.96■□□□□ 0.79
CLCN6-204ENST00000376491 SETDB2Q96T68 719 aa19.96■□□□□ 0.79
CLCN6-204ENST00000376491 CACNA1SQ13698 1873 aa19.96■□□□□ 0.79
CLCN6-204ENST00000376491 GLTPD2A6NH11 291 aa19.95■□□□□ 0.78
CLCN6-204ENST00000376491 HTRA3P83110 453 aa19.95■□□□□ 0.78
CLCN6-204ENST00000376491 NPM2Q86SE8 214 aaKnown RBP19.95■□□□□ 0.78
CLCN6-204ENST00000376491 RTF1Q92541 710 aaKnown RBP19.95■□□□□ 0.78
CLCN6-204ENST00000376491 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
CLCN6-204ENST00000376491 DICER1Q9UPY3 1922 aaKnown RBP19.95■□□□□ 0.78
CLCN6-204ENST00000376491 SLX4Q8IY92 1834 aa19.95■□□□□ 0.78
CLCN6-204ENST00000376491 C21orf2O43822 256 aa19.94■□□□□ 0.78
CLCN6-204ENST00000376491 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
CLCN6-204ENST00000376491 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms