RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 GNAI3P08754 354 aa14□□□□□ -0.17
PDPN-202ENST00000376057 LRP10Q7Z4F1 713 aa14□□□□□ -0.17
PDPN-202ENST00000376057 ANKRD44Q8N8A2 993 aa13.99□□□□□ -0.17
PDPN-202ENST00000376057 DDX54Q8TDD1 881 aaKnown RBP13.99□□□□□ -0.17
PDPN-202ENST00000376057 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
PDPN-202ENST00000376057 ADCY9O60503 1353 aa13.99□□□□□ -0.17
PDPN-202ENST00000376057 DOT1LQ8TEK3 1739 aa13.99□□□□□ -0.17
PDPN-202ENST00000376057 EIF2S2P20042 333 aaKnown RBP13.99□□□□□ -0.17
PDPN-202ENST00000376057 SLC39A6Q13433 755 aa13.99□□□□□ -0.17
PDPN-202ENST00000376057 KSR2Q6VAB6 950 aa13.99□□□□□ -0.17
PDPN-202ENST00000376057 PHAXQ9H814 394 aaKnown RBP13.99□□□□□ -0.17
PDPN-202ENST00000376057 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
PDPN-202ENST00000376057 TMOD3Q9NYL9 352 aa13.98□□□□□ -0.17
PDPN-202ENST00000376057 DDX58O95786 925 aaKnown RBP13.98□□□□□ -0.17
PDPN-202ENST00000376057 DNAAF4Q8WXU2 420 aa13.98□□□□□ -0.17
PDPN-202ENST00000376057 NUTM2BA6NNL0 878 aaPredicted RBP13.97□□□□□ -0.17
PDPN-202ENST00000376057 NUTM2EB1AL46 878 aaPredicted RBP13.97□□□□□ -0.17
PDPN-202ENST00000376057 BEND3Q5T5X7 828 aa13.97□□□□□ -0.17
PDPN-202ENST00000376057 NUTM2AQ8IVF1 878 aaPredicted RBP13.97□□□□□ -0.17
PDPN-202ENST00000376057 SIRT2Q8IXJ6 389 aa13.97□□□□□ -0.17
PDPN-202ENST00000376057 DDB1Q16531 1140 aa13.96□□□□□ -0.17
PDPN-202ENST00000376057 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
PDPN-202ENST00000376057 UTYO14607 1347 aa13.96□□□□□ -0.17
PDPN-202ENST00000376057 NUP188Q5SRE5 1749 aa13.96□□□□□ -0.17
PDPN-202ENST00000376057 F6X3S4 739 aa13.96□□□□□ -0.17
PDPN-202ENST00000376057 NUCB1Q02818 461 aa13.96□□□□□ -0.17
PDPN-202ENST00000376057 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.17
PDPN-202ENST00000376057 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.18
PDPN-202ENST00000376057 CEP85Q6P2H3 762 aa13.96□□□□□ -0.18
PDPN-202ENST00000376057 PIGBQ92521 554 aa13.96□□□□□ -0.18
PDPN-202ENST00000376057 USP35Q9P2H5 1018 aa13.96□□□□□ -0.18
PDPN-202ENST00000376057 RREB1Q92766 1687 aa13.95□□□□□ -0.18
PDPN-202ENST00000376057 GNAI2P04899 355 aa13.95□□□□□ -0.18
PDPN-202ENST00000376057 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
PDPN-202ENST00000376057 DCTPP1Q9H773 170 aa13.95□□□□□ -0.18
PDPN-202ENST00000376057 ARFGEF2Q9Y6D5 1785 aa13.95□□□□□ -0.18
PDPN-202ENST00000376057 MEIS3Q99687 375 aa13.95□□□□□ -0.18
PDPN-202ENST00000376057 PDZRN3Q9UPQ7 1066 aa13.95□□□□□ -0.18
PDPN-202ENST00000376057 COL15A1P39059 1388 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 PI4KAP2A4QPH2 592 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 PROSER3Q2NL68 480 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 PI4KAP1Q8N8J0 262 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 NGLY1Q96IV0 654 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 USP16Q9Y5T5 823 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 TJP1Q07157 1748 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 ATRNO75882 1429 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
PDPN-202ENST00000376057 HMMRO75330 724 aa13.93□□□□□ -0.18
PDPN-202ENST00000376057 HSPA1LP34931 641 aa13.93□□□□□ -0.18
PDPN-202ENST00000376057 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
PDPN-202ENST00000376057 LINS1Q8NG48 757 aa13.93□□□□□ -0.18
PDPN-202ENST00000376057 ONECUT3O60422 494 aaPredicted RBP13.93□□□□□ -0.18
PDPN-202ENST00000376057 ATP8B2P98198 1209 aa13.92□□□□□ -0.18
PDPN-202ENST00000376057 MARCH10Q8NA82 808 aaPredicted RBP13.92□□□□□ -0.18
PDPN-202ENST00000376057 MAP3K2Q9Y2U5 619 aa13.92□□□□□ -0.18
PDPN-202ENST00000376057 C8orf37Q96NL8 207 aa13.91□□□□□ -0.18
PDPN-202ENST00000376057 MTX1Q13505 466 aa13.91□□□□□ -0.18
PDPN-202ENST00000376057 PLBD2Q8NHP8 589 aa13.91□□□□□ -0.18
PDPN-202ENST00000376057 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
PDPN-202ENST00000376057 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
PDPN-202ENST00000376057 USP21Q9UK80 565 aa13.91□□□□□ -0.18
PDPN-202ENST00000376057 NHSQ6T4R5 1651 aa13.9□□□□□ -0.18
PDPN-202ENST00000376057 CHD1LQ86WJ1 897 aa13.9□□□□□ -0.18
PDPN-202ENST00000376057 UBTFL1P0CB47 393 aaPredicted RBP13.9□□□□□ -0.18
PDPN-202ENST00000376057 ANKRD13DQ6ZTN6 518 aa13.9□□□□□ -0.18
PDPN-202ENST00000376057 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
PDPN-202ENST00000376057 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 XAGE3Q8WTP9 111 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 PDE4AP27815 886 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 POLA2Q14181 598 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 FAM161AQ3B820 660 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 ASAP1Q9ULH1 1129 aa13.89□□□□□ -0.19
PDPN-202ENST00000376057 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
PDPN-202ENST00000376057 STARD3NLO95772 234 aa13.88□□□□□ -0.19
PDPN-202ENST00000376057 SSH3Q8TE77 659 aa13.88□□□□□ -0.19
PDPN-202ENST00000376057 ANXA1P04083 346 aa13.88□□□□□ -0.19
PDPN-202ENST00000376057 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
PDPN-202ENST00000376057 SMARCC1Q92922 1105 aaPredicted RBP13.88□□□□□ -0.19
PDPN-202ENST00000376057 AFDNP55196 1824 aaKnown RBP13.88□□□□□ -0.19
PDPN-202ENST00000376057 COL5A3P25940 1745 aaPredicted RBP13.87□□□□□ -0.19
PDPN-202ENST00000376057 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
PDPN-202ENST00000376057 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
PDPN-202ENST00000376057 GJD4Q96KN9 370 aaPredicted RBP13.86□□□□□ -0.19
PDPN-202ENST00000376057 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
PDPN-202ENST00000376057 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
PDPN-202ENST00000376057 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
PDPN-202ENST00000376057 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
PDPN-202ENST00000376057 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
PDPN-202ENST00000376057 GRM8O00222 908 aa13.86□□□□□ -0.19
PDPN-202ENST00000376057 MYL6BP14649 208 aa13.86□□□□□ -0.19
PDPN-202ENST00000376057 LRRFIP2Q9Y608 721 aaKnown RBP13.86□□□□□ -0.19
PDPN-202ENST00000376057 TRIM28Q13263 835 aaKnown RBP13.85□□□□□ -0.19
PDPN-202ENST00000376057 C8orf34Q49A92 452 aa13.85□□□□□ -0.19
PDPN-202ENST00000376057 AFF2P51816 1311 aa13.85□□□□□ -0.19
PDPN-202ENST00000376057 PTCD1O75127 700 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms