RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 TCEAL9Q9UHQ7 104 aa10.23□□□□□ -0.77
SHROOM4-202ENST00000376020 MYO5CQ9NQX4 1742 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 IFI16Q16666 785 aaKnown RBP10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 B4GALNT4Q76KP1 1039 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 CASTP20810 708 aaKnown RBP10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 CETN2P41208 172 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 UTP14CQ5TAP6 766 aaKnown RBP10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 IQCDQ96DY2 449 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 ZNF287Q9HBT7 754 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 CLASP1Q7Z460 1538 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 CSB-PGBD3P0DP91 1061 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 C8orf34Q49A92 452 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 RPGRIP1Q96KN7 1286 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 RASSF4Q9H2L5 321 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 IRX3P78415 501 aaPredicted RBP10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 HSP90AB2PQ58FF8 381 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 C16orf45Q96MC5 204 aaPredicted RBP10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 IMPACTQ9P2X3 320 aa10.22□□□□□ -0.77
SHROOM4-202ENST00000376020 YEATS4O95619 227 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 TRIM27P14373 513 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 SYCP1Q15431 976 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 TBC1D9Q6ZT07 1266 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 POTEDQ86YR6 584 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 OPA1O60313 960 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 SSR1P43307 286 aaKnown RBP10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 TMEM57Q8N5G2 664 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 SSH1Q8WYL5 1049 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 TAF4BQ92750 862 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 CROCCP2Q86T23 111 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 PLVAPQ9BX97 442 aa10.21□□□□□ -0.77
SHROOM4-202ENST00000376020 CCDC158Q5M9N0 1113 aa10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 TTC22Q5TAA0 569 aa10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 ERO1AQ96HE7 468 aa10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 TTC14Q96N46 770 aa10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 EBAG9O00559 213 aa10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 XPCQ01831 940 aaPredicted RBP10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 PLEKHO1Q53GL0 409 aaPredicted RBP10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 CDK5RAP3Q96JB5 506 aa10.21□□□□□ -0.78
SHROOM4-202ENST00000376020 PBRM1Q86U86 1689 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 PPM1EQ8WY54 764 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 EVI5LQ96CN4 794 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 WDR62O43379 1518 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 RAD50Q92878 1312 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 A0A1B0GUA9 196 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 CCDC175P0C221 793 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 RBM28Q9NW13 759 aaKnown RBP10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 ELL2O00472 640 aaPredicted RBP10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 HSPA4P34932 840 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 HDGFL1Q5TGJ6 251 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 CCDC43Q96MW1 224 aaKnown RBP10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 FKBP15Q5T1M5 1219 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 SPATA24Q86W54 205 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 SEPT7Q16181 437 aaKnown RBP10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 NSRP1Q9H0G5 558 aaKnown RBP10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 SHROOM2Q13796 1616 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 TTC41PQ6P2S7 1318 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 SLC4A2P04920 1241 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 ANKRD24Q8TF21 1146 aa10.2□□□□□ -0.78
SHROOM4-202ENST00000376020 DESP17661 470 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 PRPHP41219 470 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 CLUL1Q15846 466 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 MINK1Q8N4C8 1332 aaPredicted RBP10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 VPS37DQ86XT2 251 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 LRRC27Q9C0I9 530 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 ARHGEF5Q12774 1597 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 RMND1Q9NWS8 449 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 GOLGA1Q92805 767 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 AKAP2Q9Y2D5 859 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 CCDC172P0C7W6 258 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 HSP90AB3PQ58FF7 597 aa10.19□□□□□ -0.78
SHROOM4-202ENST00000376020 CTAGE9A4FU28 777 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 ARHGAP25P42331 645 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 JAKMIP1Q96N16 626 aaKnown RBP10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 KDM5CP41229 1560 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 MNAT1P51948 309 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 CEP128Q6ZU80 1094 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 ZNF644Q9H582 1327 aaPredicted RBP10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 PPFIA3O75145 1194 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 TACO1Q9BSH4 297 aaKnown RBP10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 GPATCH8Q9UKJ3 1502 aaKnown RBP10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 SRGAP3O43295 1099 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 SBNO2Q9Y2G9 1366 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 A0A0G2JS52 829 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 RIC3Q7Z5B4 369 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 ATP8B1O43520 1251 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 PPP1R2P41236 205 aa10.18□□□□□ -0.78
SHROOM4-202ENST00000376020 HOOK3Q86VS8 718 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 KIF4BQ2VIQ3 1234 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 GTF2A1P52655 376 aaPredicted RBP10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 CBX1P83916 185 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 HDXQ7Z353 690 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 KDM2BQ8NHM5 1336 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms