RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
MSH5-203ENST00000375750 CASC1Q6TDU7 716 aa18.53■□□□□ 0.56
MSH5-203ENST00000375750 IL17REQ8NFR9 667 aa18.53■□□□□ 0.56
MSH5-203ENST00000375750 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
MSH5-203ENST00000375750 XIRP1Q702N8 1843 aaKnown RBP18.53■□□□□ 0.56
MSH5-203ENST00000375750 PDE1AP54750 535 aa18.53■□□□□ 0.56
MSH5-203ENST00000375750 R3HCC1Q9Y3T6 440 aaKnown RBP18.53■□□□□ 0.56
MSH5-203ENST00000375750 IBTKQ9P2D0 1353 aaPredicted RBP18.53■□□□□ 0.56
MSH5-203ENST00000375750 MPNDQ8N594 471 aa18.53■□□□□ 0.56
MSH5-203ENST00000375750 TMX3Q96JJ7 454 aa18.53■□□□□ 0.56
MSH5-203ENST00000375750 OFD1O75665 1012 aa18.52■□□□□ 0.55
MSH5-203ENST00000375750 GDPD2Q9HCC8 539 aa18.52■□□□□ 0.55
MSH5-203ENST00000375750 SLAIN2Q9P270 581 aa18.52■□□□□ 0.55
MSH5-203ENST00000375750 MED1Q15648 1581 aaPredicted RBP18.52■□□□□ 0.55
MSH5-203ENST00000375750 REC8O95072 547 aa18.51■□□□□ 0.55
MSH5-203ENST00000375750 CWC22Q9HCG8 908 aaKnown RBP18.51■□□□□ 0.55
MSH5-203ENST00000375750 RGPD2P0DJD1 1756 aa18.51■□□□□ 0.55
MSH5-203ENST00000375750 DTNBO60941 627 aa18.51■□□□□ 0.55
MSH5-203ENST00000375750 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
MSH5-203ENST00000375750 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
MSH5-203ENST00000375750 RILPL2Q969X0 211 aa18.5■□□□□ 0.55
MSH5-203ENST00000375750 MAP3K5Q99683 1374 aa18.5■□□□□ 0.55
MSH5-203ENST00000375750 ZMYND15Q9H091 742 aa18.5■□□□□ 0.55
MSH5-203ENST00000375750 UPF3BQ9BZI7 483 aaKnown RBP18.49■□□□□ 0.55
MSH5-203ENST00000375750 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
MSH5-203ENST00000375750 TPM2P07951 284 aa18.49■□□□□ 0.55
MSH5-203ENST00000375750 CHRNA2Q15822 529 aa18.49■□□□□ 0.55
MSH5-203ENST00000375750 PNMA6EA0A0J9YXQ4 647 aa18.48■□□□□ 0.55
MSH5-203ENST00000375750 GLIPR1L2Q4G1C9 344 aa18.48■□□□□ 0.55
MSH5-203ENST00000375750 UNC5CLQ8IV45 518 aa18.48■□□□□ 0.55
MSH5-203ENST00000375750 PHRF1Q9P1Y6 1649 aaKnown RBP18.48■□□□□ 0.55
MSH5-203ENST00000375750 LGR6Q9HBX8 967 aa18.48■□□□□ 0.55
MSH5-203ENST00000375750 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
MSH5-203ENST00000375750 PXDNQ92626 1479 aa18.48■□□□□ 0.55
MSH5-203ENST00000375750 TRIM6-TRIM34B2RNG4 842 aa18.47■□□□□ 0.55
MSH5-203ENST00000375750 ARID3AQ99856 593 aa18.47■□□□□ 0.55
MSH5-203ENST00000375750 IL25Q9H293 177 aa18.47■□□□□ 0.55
MSH5-203ENST00000375750 PDLIM2Q96JY6 352 aa18.47■□□□□ 0.55
MSH5-203ENST00000375750 ANO2Q9NQ90 1003 aa18.47■□□□□ 0.55
MSH5-203ENST00000375750 KIAA0232Q92628 1395 aa18.47■□□□□ 0.55
MSH5-203ENST00000375750 LRSAM1Q6UWE0 723 aa18.47■□□□□ 0.55
MSH5-203ENST00000375750 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
MSH5-203ENST00000375750 ERBB3P21860 1342 aa18.46■□□□□ 0.55
MSH5-203ENST00000375750 MAP4K4O95819 1239 aaPredicted RBP18.46■□□□□ 0.55
MSH5-203ENST00000375750 ESYT1Q9BSJ8 1104 aa18.46■□□□□ 0.55
MSH5-203ENST00000375750 NOL7Q9UMY1 257 aaKnown RBP18.46■□□□□ 0.55
MSH5-203ENST00000375750 PTPRCP08575 1304 aa18.46■□□□□ 0.55
MSH5-203ENST00000375750 GADD45BO75293 160 aaPredicted RBP18.46■□□□□ 0.55
MSH5-203ENST00000375750 TAF7Q15545 349 aaPredicted RBP18.45■□□□□ 0.54
MSH5-203ENST00000375750 ZNF530Q6P9A1 599 aaPredicted RBP18.45■□□□□ 0.54
MSH5-203ENST00000375750 PLEKHO1Q53GL0 409 aaPredicted RBP18.45■□□□□ 0.54
MSH5-203ENST00000375750 HMMRO75330 724 aa18.44■□□□□ 0.54
MSH5-203ENST00000375750 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
MSH5-203ENST00000375750 NLRP2Q9NX02 1062 aa18.44■□□□□ 0.54
MSH5-203ENST00000375750 FAM13BQ9NYF5 915 aa18.44■□□□□ 0.54
MSH5-203ENST00000375750 RGPD5Q99666 1765 aa18.44■□□□□ 0.54
MSH5-203ENST00000375750 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.43■□□□□ 0.54
MSH5-203ENST00000375750 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
MSH5-203ENST00000375750 BRD1O95696 1058 aa18.43■□□□□ 0.54
MSH5-203ENST00000375750 CHMLP26374 656 aa18.42■□□□□ 0.54
MSH5-203ENST00000375750 HAP1P54257 671 aaPredicted RBP18.42■□□□□ 0.54
MSH5-203ENST00000375750 GNAI2P04899 355 aa18.42■□□□□ 0.54
MSH5-203ENST00000375750 MX1P20591 662 aa18.42■□□□□ 0.54
MSH5-203ENST00000375750 OSBPL3Q9H4L5 887 aa18.42■□□□□ 0.54
MSH5-203ENST00000375750 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
MSH5-203ENST00000375750 AMOTQ4VCS5 1084 aa18.42■□□□□ 0.54
MSH5-203ENST00000375750 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
MSH5-203ENST00000375750 FKBP5Q13451 457 aaPredicted RBP18.41■□□□□ 0.54
MSH5-203ENST00000375750 LRRCC1Q9C099 1032 aa18.41■□□□□ 0.54
MSH5-203ENST00000375750 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
MSH5-203ENST00000375750 NUTM1Q86Y26 1132 aa18.41■□□□□ 0.54
MSH5-203ENST00000375750 ZKSCAN5Q9Y2L8 839 aa18.41■□□□□ 0.54
MSH5-203ENST00000375750 SOS2Q07890 1332 aaPredicted RBP18.41■□□□□ 0.54
MSH5-203ENST00000375750 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
MSH5-203ENST00000375750 JARID2Q92833 1246 aaPredicted RBP18.4■□□□□ 0.54
MSH5-203ENST00000375750 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
MSH5-203ENST00000375750 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
MSH5-203ENST00000375750 PKNOX2Q96KN3 472 aa18.4■□□□□ 0.54
MSH5-203ENST00000375750 ZNF830Q96NB3 372 aaPredicted RBP18.4■□□□□ 0.54
MSH5-203ENST00000375750 NCAPD2Q15021 1401 aa18.4■□□□□ 0.54
MSH5-203ENST00000375750 LRRC37A3O60309 1634 aa18.39■□□□□ 0.53
MSH5-203ENST00000375750 ZNF500O60304 480 aaPredicted RBP18.39■□□□□ 0.53
MSH5-203ENST00000375750 CCT4P50991 539 aaKnown RBP18.39■□□□□ 0.53
MSH5-203ENST00000375750 UQCRHLA0A096LP55 91 aa18.39■□□□□ 0.53
MSH5-203ENST00000375750 UQCRHP07919 91 aa18.39■□□□□ 0.53
MSH5-203ENST00000375750 KCNQ3O43525 872 aa18.38■□□□□ 0.53
MSH5-203ENST00000375750 CUL4AQ13619 759 aa18.38■□□□□ 0.53
MSH5-203ENST00000375750 FLIIQ13045 1269 aa18.38■□□□□ 0.53
MSH5-203ENST00000375750 USP48Q86UV5 1035 aa18.38■□□□□ 0.53
MSH5-203ENST00000375750 PDCL3Q9H2J4 239 aa18.38■□□□□ 0.53
MSH5-203ENST00000375750 HS1BP3Q53T59 392 aa18.37■□□□□ 0.53
MSH5-203ENST00000375750 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
MSH5-203ENST00000375750 TEFQ10587 303 aa18.37■□□□□ 0.53
MSH5-203ENST00000375750 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
MSH5-203ENST00000375750 TSPY26PQ9H489 355 aa18.36■□□□□ 0.53
MSH5-203ENST00000375750 PTMAP06454 111 aaKnown RBP18.36■□□□□ 0.53
MSH5-203ENST00000375750 BABAM1Q9NWV8 329 aa18.36■□□□□ 0.53
MSH5-203ENST00000375750 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
MSH5-203ENST00000375750 CPA1P15085 419 aa18.36■□□□□ 0.53
MSH5-203ENST00000375750 ATP8B2P98198 1209 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms