RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.75
VARS-215ENST00000375663 ANO10Q9NW15 660 aa19.77■□□□□ 0.75
VARS-215ENST00000375663 NECAB1Q8N987 351 aa19.76■□□□□ 0.75
VARS-215ENST00000375663 ACBD3Q9H3P7 528 aa19.76■□□□□ 0.75
VARS-215ENST00000375663 MAST1Q9Y2H9 1570 aa19.76■□□□□ 0.75
VARS-215ENST00000375663 XBP1P17861 261 aa19.76■□□□□ 0.75
VARS-215ENST00000375663 SYTL4Q96C24 671 aaPredicted RBP19.76■□□□□ 0.75
VARS-215ENST00000375663 PIK3R4Q99570 1358 aa19.76■□□□□ 0.75
VARS-215ENST00000375663 ANXA1P04083 346 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 SFPQP23246 707 aaKnown RBP eCLIP19.75■□□□□ 0.75
VARS-215ENST00000375663 LARP1Q6PKG0 1096 aaKnown RBP19.75■□□□□ 0.75
VARS-215ENST00000375663 INTS4Q96HW7 963 aaKnown RBP19.75■□□□□ 0.75
VARS-215ENST00000375663 CEP126Q9P2H0 1117 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 ZMYM3Q14202 1370 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 RRP12Q5JTH9 1297 aaKnown RBP19.75■□□□□ 0.75
VARS-215ENST00000375663 VPS37DQ86XT2 251 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 CTNNA3Q9UI47 895 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 MBD5Q9P267 1494 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 MPRIPQ6WCQ1 1025 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 KIF18AQ8NI77 898 aa19.75■□□□□ 0.75
VARS-215ENST00000375663 BRPF1P55201 1214 aaPredicted RBP19.74■□□□□ 0.75
VARS-215ENST00000375663 GUCY1B3Q02153 619 aa19.74■□□□□ 0.75
VARS-215ENST00000375663 PPP4R3BQ5MIZ7 849 aa19.74■□□□□ 0.75
VARS-215ENST00000375663 FILIP1LQ4L180 1135 aa19.74■□□□□ 0.75
VARS-215ENST00000375663 DENND4BO75064 1496 aaPredicted RBP19.74■□□□□ 0.75
VARS-215ENST00000375663 ABCC10Q5T3U5 1492 aa19.74■□□□□ 0.75
VARS-215ENST00000375663 KIF2AO00139 706 aaPredicted RBP19.73■□□□□ 0.75
VARS-215ENST00000375663 CHMLP26374 656 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 ZNF445P59923 1031 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 STK11IPQ8N1F8 1099 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 UBXN4Q92575 508 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 TCEANC2Q96MN5 208 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
VARS-215ENST00000375663 CLSTN1O94985 981 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 DNM1Q05193 864 aaKnown RBP19.73■□□□□ 0.75
VARS-215ENST00000375663 ANTXR1Q9H6X2 564 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 NOL7Q9UMY1 257 aaKnown RBP19.73■□□□□ 0.75
VARS-215ENST00000375663 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
VARS-215ENST00000375663 CBFA2T2O43439 604 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 F13A1P00488 732 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 TRMT1Q9NXH9 659 aaKnown RBP19.72■□□□□ 0.75
VARS-215ENST00000375663 SMTNL1A8MU46 457 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 CABP4P57796 275 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.72■□□□□ 0.756e-7■■■□□ 17.5
VARS-215ENST00000375663 BRMS1Q9HCU9 246 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 PBRM1Q86U86 1689 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 ATF3P18847 181 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 CFAP100Q494V2 611 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 CTAGE5O15320 804 aa19.72■□□□□ 0.75
VARS-215ENST00000375663 CCDC57Q2TAC2 916 aa19.71■□□□□ 0.75
VARS-215ENST00000375663 PPIP5K1Q6PFW1 1433 aa19.71■□□□□ 0.75
VARS-215ENST00000375663 FAM200AQ8TCP9 573 aa19.71■□□□□ 0.75
VARS-215ENST00000375663 ABCC2Q92887 1545 aa19.71■□□□□ 0.75
VARS-215ENST00000375663 MAP3K2Q9Y2U5 619 aa19.7■□□□□ 0.74
VARS-215ENST00000375663 WDR7Q9Y4E6 1490 aa19.7■□□□□ 0.74
VARS-215ENST00000375663 TRIM22Q8IYM9 498 aa19.7■□□□□ 0.74
VARS-215ENST00000375663 CNNM1Q9NRU3 951 aa19.7■□□□□ 0.74
VARS-215ENST00000375663 AMOTL2Q9Y2J4 779 aa19.7■□□□□ 0.74
VARS-215ENST00000375663 MYD88Q99836 296 aa19.7■□□□□ 0.74
VARS-215ENST00000375663 LMBRD1Q9NUN5 540 aa19.7■□□□□ 0.74
VARS-215ENST00000375663 SPDYE4A6NLX3 237 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 AK2P54819 239 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 FSIP1Q8NA03 581 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 KCNH5Q8NCM2 988 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 MTHFSDQ2M296 383 aaKnown RBP19.69■□□□□ 0.74
VARS-215ENST00000375663 CCDC186Q7Z3E2 898 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 SMARCE1Q969G3 411 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 CWC15Q9P013 229 aaKnown RBP19.69■□□□□ 0.74
VARS-215ENST00000375663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.69■□□□□ 0.742e-13■■■□□ 16.4
VARS-215ENST00000375663 FOXO3O43524 673 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 CCT2P78371 535 aaKnown RBP19.69■□□□□ 0.74
VARS-215ENST00000375663 PPFIBP1Q86W92 1011 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 GAS2L3Q86XJ1 694 aa19.69■□□□□ 0.74
VARS-215ENST00000375663 ZHX1Q9UKY1 873 aaPredicted RBP19.69■□□□□ 0.74
VARS-215ENST00000375663 RBM8AQ9Y5S9 174 aaKnown RBP19.69■□□□□ 0.74
VARS-215ENST00000375663 EIF4G3O43432 1585 aaKnown RBP19.69■□□□□ 0.74
VARS-215ENST00000375663 BCORL1Q5H9F3 1711 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 MSH6P52701 1360 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 NEMFO60524 1076 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 HMGB1P09429 215 aaKnown RBP19.68■□□□□ 0.74
VARS-215ENST00000375663 IMMTQ16891 758 aaKnown RBP19.68■□□□□ 0.74
VARS-215ENST00000375663 DACT1Q9NYF0 836 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 FSD2A1L4K1 749 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 CDKL5O76039 1030 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 AMOTQ4VCS5 1084 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 HYPKQ9NX55 129 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 ZNF518AQ6AHZ1 1483 aa19.68■□□□□ 0.74
VARS-215ENST00000375663 C8orf76Q96K31 380 aa19.67■□□□□ 0.74
VARS-215ENST00000375663 DACH1Q9UI36 760 aa19.67■□□□□ 0.74
VARS-215ENST00000375663 CAVIN2O95810 425 aa19.67■□□□□ 0.74
VARS-215ENST00000375663 G2E3Q7L622 706 aa19.67■□□□□ 0.74
VARS-215ENST00000375663 ZC3H6P61129 1189 aaKnown RBP19.67■□□□□ 0.74
VARS-215ENST00000375663 NEK1Q96PY6 1258 aa19.67■□□□□ 0.74
VARS-215ENST00000375663 CGNQ9P2M7 1197 aaKnown RBP19.67■□□□□ 0.74
VARS-215ENST00000375663 NPATQ14207 1427 aa19.66■□□□□ 0.74
VARS-215ENST00000375663 ERICH4A6NGS2 130 aa19.66■□□□□ 0.74
VARS-215ENST00000375663 SYT1P21579 422 aa19.66■□□□□ 0.74
VARS-215ENST00000375663 IL13P35225 146 aa19.66■□□□□ 0.74
VARS-215ENST00000375663 ANO6Q4KMQ2 910 aa19.66■□□□□ 0.74
VARS-215ENST00000375663 AMOTL1Q8IY63 956 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms