RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 ZNF526Q8TF50 670 aaPredicted RBP20.75■□□□□ 0.91
SDHB-201ENST00000375499 CCDC87Q9NVE4 849 aa20.75■□□□□ 0.91
SDHB-201ENST00000375499 SOS1Q07889 1333 aaPredicted RBP20.75■□□□□ 0.91
SDHB-201ENST00000375499 KIF3CO14782 793 aa20.74■□□□□ 0.91
SDHB-201ENST00000375499 TGFB2P61812 414 aa20.74■□□□□ 0.91
SDHB-201ENST00000375499 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
SDHB-201ENST00000375499 KIAA1551Q9HCM1 1747 aa20.74■□□□□ 0.91
SDHB-201ENST00000375499 MMP10P09238 476 aa20.73■□□□□ 0.91
SDHB-201ENST00000375499 RFC4P35249 363 aa20.73■□□□□ 0.91
SDHB-201ENST00000375499 VSIG10Q8N0Z9 540 aa20.73■□□□□ 0.91
SDHB-201ENST00000375499 KIF13BQ9NQT8 1826 aa20.73■□□□□ 0.91
SDHB-201ENST00000375499 USP42Q9H9J4 1324 aaKnown RBP20.73■□□□□ 0.91
SDHB-201ENST00000375499 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
SDHB-201ENST00000375499 TOMM70O94826 608 aa20.72■□□□□ 0.91
SDHB-201ENST00000375499 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
SDHB-201ENST00000375499 RTF1Q92541 710 aaKnown RBP20.71■□□□□ 0.91
SDHB-201ENST00000375499 KDM3BQ7LBC6 1761 aa20.71■□□□□ 0.91
SDHB-201ENST00000375499 COL15A1P39059 1388 aa20.71■□□□□ 0.91
SDHB-201ENST00000375499 FKBP8Q14318 412 aa20.7■□□□□ 0.9
SDHB-201ENST00000375499 NLGN1Q8N2Q7 840 aa20.7■□□□□ 0.9
SDHB-201ENST00000375499 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
SDHB-201ENST00000375499 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
SDHB-201ENST00000375499 HTATSF1O43719 755 aaKnown RBP20.69■□□□□ 0.9
SDHB-201ENST00000375499 NFE2L2Q16236 605 aa20.69■□□□□ 0.9
SDHB-201ENST00000375499 C10orf71Q711Q0 1435 aa20.69■□□□□ 0.9
SDHB-201ENST00000375499 N4BP2Q86UW6 1770 aaPredicted RBP20.68■□□□□ 0.9
SDHB-201ENST00000375499 FMNL2Q96PY5 1086 aa20.68■□□□□ 0.9
SDHB-201ENST00000375499 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
SDHB-201ENST00000375499 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
SDHB-201ENST00000375499 DDR1Q08345 913 aa20.67■□□□□ 0.9
SDHB-201ENST00000375499 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
SDHB-201ENST00000375499 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
SDHB-201ENST00000375499 WWC3Q9ULE0 1092 aa20.66■□□□□ 0.9
SDHB-201ENST00000375499 MAPK8IP3Q9UPT6 1336 aa20.66■□□□□ 0.9
SDHB-201ENST00000375499 PXDNLA1KZ92 1463 aa20.66■□□□□ 0.9
SDHB-201ENST00000375499 AFDNP55196 1824 aaKnown RBP20.65■□□□□ 0.9
SDHB-201ENST00000375499 NEFMP07197 916 aa20.65■□□□□ 0.9
SDHB-201ENST00000375499 CCDC146Q8IYE0 955 aa20.65■□□□□ 0.9
SDHB-201ENST00000375499 DNAJC5GQ8N7S2 189 aa20.65■□□□□ 0.9
SDHB-201ENST00000375499 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
SDHB-201ENST00000375499 LAMB4A4D0S4 1761 aa20.64■□□□□ 0.9
SDHB-201ENST00000375499 STARD3NLO95772 234 aa20.64■□□□□ 0.89
SDHB-201ENST00000375499 A1BGP04217 495 aa20.64■□□□□ 0.89
SDHB-201ENST00000375499 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.89
SDHB-201ENST00000375499 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
SDHB-201ENST00000375499 PIP4K2AP48426 406 aaPredicted RBP20.63■□□□□ 0.89
SDHB-201ENST00000375499 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
SDHB-201ENST00000375499 NARFQ9UHQ1 456 aa20.63■□□□□ 0.89
SDHB-201ENST00000375499 BCORQ6W2J9 1755 aa20.63■□□□□ 0.89
SDHB-201ENST00000375499 BRCA1P38398 1863 aaKnown RBP20.62■□□□□ 0.89
SDHB-201ENST00000375499 NRXN2Q9P2S2 1712 aa20.62■□□□□ 0.89
SDHB-201ENST00000375499 BCS1LQ9Y276 419 aa20.62■□□□□ 0.89
SDHB-201ENST00000375499 POLRMTO00411 1230 aaKnown RBP20.61■□□□□ 0.89
SDHB-201ENST00000375499 ZPR1O75312 459 aa20.61■□□□□ 0.89
SDHB-201ENST00000375499 ARHGAP27Q6ZUM4 889 aa20.61■□□□□ 0.89
SDHB-201ENST00000375499 RBM46Q8TBY0 533 aaKnown RBP20.61■□□□□ 0.89
SDHB-201ENST00000375499 TEX13AQ9BXU3 409 aaPredicted RBP20.61■□□□□ 0.89
SDHB-201ENST00000375499 PNNQ9H307 717 aaKnown RBP20.61■□□□□ 0.89
SDHB-201ENST00000375499 RRP7AQ9Y3A4 280 aaKnown RBP20.61■□□□□ 0.89
SDHB-201ENST00000375499 PARP3Q9Y6F1 533 aa20.61■□□□□ 0.89
SDHB-201ENST00000375499 TM4SF1P30408 202 aa20.6■□□□□ 0.89
SDHB-201ENST00000375499 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
SDHB-201ENST00000375499 ADAMTS8Q9UP79 889 aa20.6■□□□□ 0.89
SDHB-201ENST00000375499 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
SDHB-201ENST00000375499 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
SDHB-201ENST00000375499 ZNF316A6NFI3 1004 aaPredicted RBP20.59■□□□□ 0.89
SDHB-201ENST00000375499 RIPK4P57078 832 aa20.59■□□□□ 0.89
SDHB-201ENST00000375499 NFIXQ14938 502 aa20.59■□□□□ 0.89
SDHB-201ENST00000375499 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
SDHB-201ENST00000375499 IL6STP40189 918 aaPredicted RBP20.58■□□□□ 0.89
SDHB-201ENST00000375499 FSTL1Q12841 308 aa20.58■□□□□ 0.89
SDHB-201ENST00000375499 WDR43Q15061 677 aaKnown RBP eCLIP20.58■□□□□ 0.89
SDHB-201ENST00000375499 CCDC184Q52MB2 194 aa20.58■□□□□ 0.89
SDHB-201ENST00000375499 C16orf71Q8IYS4 520 aaPredicted RBP20.57■□□□□ 0.88
SDHB-201ENST00000375499 TBC1D2BQ9UPU7 963 aa20.57■□□□□ 0.88
SDHB-201ENST00000375499 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
SDHB-201ENST00000375499 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
SDHB-201ENST00000375499 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
SDHB-201ENST00000375499 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
SDHB-201ENST00000375499 CAMTA2O94983 1202 aa20.55■□□□□ 0.88
SDHB-201ENST00000375499 DPEP1P16444 411 aa20.55■□□□□ 0.88
SDHB-201ENST00000375499 NEUROD2Q15784 382 aa20.55■□□□□ 0.88
SDHB-201ENST00000375499 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
SDHB-201ENST00000375499 PIM2Q9P1W9 311 aa20.55■□□□□ 0.88
SDHB-201ENST00000375499 CARMIL3Q8ND23 1372 aa20.55■□□□□ 0.88
SDHB-201ENST00000375499 KDM2BQ8NHM5 1336 aa20.54■□□□□ 0.88
SDHB-201ENST00000375499 A0A087WZG4 1122 aa20.54■□□□□ 0.88
SDHB-201ENST00000375499 KCNA3P22001 575 aa20.54■□□□□ 0.88
SDHB-201ENST00000375499 TBC1D9BQ66K14 1250 aa20.54■□□□□ 0.88
SDHB-201ENST00000375499 NMRK2Q9NPI5 230 aa20.54■□□□□ 0.88
SDHB-201ENST00000375499 TRIM35Q9UPQ4 493 aa20.54■□□□□ 0.88
SDHB-201ENST00000375499 ANKRD31Q8N7Z5 1873 aa20.54■□□□□ 0.88
SDHB-201ENST00000375499 BICDL1Q6ZP65 573 aa20.53■□□□□ 0.88
SDHB-201ENST00000375499 JMYQ8N9B5 988 aa20.53■□□□□ 0.88
SDHB-201ENST00000375499 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
SDHB-201ENST00000375499 C9orf131Q5VYM1 1079 aa20.52■□□□□ 0.88
SDHB-201ENST00000375499 KLRG1Q96E93 195 aa20.52■□□□□ 0.88
SDHB-201ENST00000375499 SERPINB2P05120 415 aa20.51■□□□□ 0.87
SDHB-201ENST00000375499 CHRNA5P30532 468 aa20.51■□□□□ 0.87
SDHB-201ENST00000375499 DZIP3Q86Y13 1208 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms