RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 SPTY2D1Q68D10 685 aaPredicted RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 IFT74Q96LB3 600 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 RMDN2Q96LZ7 410 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 PPP1R12CQ9BZL4 782 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 SMTNL1A8MU46 457 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CTAGE8P0CG41 777 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC14Q49A88 953 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC122Q5T0U0 273 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CTAGE4Q8IX94 777 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 PRPF38AQ8NAV1 312 aaKnown RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 GBP5Q96PP8 586 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 TRIM4Q9C037 500 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CIB2O75838 187 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 SLC4A1P02730 911 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC102BQ68D86 513 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 RALYLQ86SE5 291 aaKnown RBP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 DDX42Q86XP3 938 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCN2A-202ENST00000375427 TSG101Q99816 390 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 UBAC1Q9BSL1 405 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 SPC25Q9HBM1 224 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 TACC3Q9Y6A5 838 aa6.87□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC196A0A1B0GTZ2 297 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 MICALL1Q8N3F8 863 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 OTUD6BQ8N6M0 293 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 SYTL4Q96C24 671 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 CHMP6Q96FZ7 201 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 A0A1W2PRG0 241 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 XBP1P17861 261 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 TRPC3Q13507 836 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 NUDCD3Q8IVD9 361 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 CWC22Q9HCG8 908 aaKnown RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 DACH1Q9UI36 760 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 CD2APQ9Y5K6 639 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 PLEKHG5O94827 1062 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 MAATS1Q7Z4T9 603 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 FNBP4Q8N3X1 1017 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 HELBQ8NG08 1087 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 LRRC45Q96CN5 670 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 KRT5P13647 590 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 POLD1P28340 1107 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 NOP14P78316 857 aaKnown RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 MRPS9P82933 396 aaKnown RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 MYSM1Q5VVJ2 828 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 FOXD4L6Q3SYB3 417 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 FOXD4L3Q6VB84 417 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-202ENST00000375427 APBB1O00213 710 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 HAUS8Q9BT25 410 aa6.86□□□□□ -1.31
SCN2A-202ENST00000375427 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 RLBP1P12271 317 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 ERCC6LQ2NKX8 1250 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 GLE1Q53GS7 698 aaKnown RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 ZNF397Q8NF99 534 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 CTCFLQ8NI51 663 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 CTNNBL1Q8WYA6 563 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 FOSL2P15408 326 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 PSMD7P51665 324 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 FOSBP53539 338 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 LZICQ8WZA0 190 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 EBAG9O00559 213 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 PRKRIP1Q9H875 184 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 ZKSCAN1P17029 563 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 MSR1P21757 451 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 FLCNQ8NFG4 579 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 H0YC42 278 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 CETN3O15182 167 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 KIF18AQ8NI77 898 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 PLCB1Q9NQ66 1216 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 REC8O95072 547 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 MMRN2Q9H8L6 949 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 FRAT2O75474 233 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 IRX4P78413 519 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 CIZ1Q9ULV3 898 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-202ENST00000375427 MRFAP1Q9Y605 127 aa6.85□□□□□ -1.31
SCN2A-202ENST00000375427 BAG1Q99933 345 aaPredicted RBP6.84□□□□□ -1.31
SCN2A-202ENST00000375427 SCINQ9Y6U3 715 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 ERICH2A1L162 156 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 ARHGAP29Q52LW3 1261 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 SLC4A10Q6U841 1118 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 BRPF1P55201 1214 aaPredicted RBP6.84□□□□□ -1.31
SCN2A-202ENST00000375427 NEUROD2Q15784 382 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 RGS22Q8NE09 1264 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 PNISRQ8TF01 805 aaKnown RBP6.84□□□□□ -1.31
SCN2A-202ENST00000375427 CFDP1Q9UEE9 299 aaPredicted RBP6.84□□□□□ -1.31
SCN2A-202ENST00000375427 SERPINC1P01008 464 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 CCDC155Q8N6L0 562 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 KIAA1524Q8TCG1 905 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 JAKMIP2Q96AA8 810 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 NOP56O00567 594 aaKnown RBP6.84□□□□□ -1.31
SCN2A-202ENST00000375427 NDC80O14777 642 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 TAOK1Q7L7X3 1001 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 ARHGAP24Q8N264 748 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 SPAG5Q96R06 1193 aa6.84□□□□□ -1.31
SCN2A-202ENST00000375427 MRPS26Q9BYN8 205 aaKnown RBP6.84□□□□□ -1.31
SCN2A-202ENST00000375427 EIF2S2P20042 333 aaKnown RBP6.84□□□□□ -1.31
SCN2A-202ENST00000375427 NBPF8Q3BBV2 869 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms