RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
COL5A2-201ENST00000374866 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
COL5A2-201ENST00000374866 WDR33Q9C0J8 1336 aaKnown RBP13.05□□□□□ -0.32
COL5A2-201ENST00000374866 PLS1Q14651 629 aa13.05□□□□□ -0.32
COL5A2-201ENST00000374866 IFT140Q96RY7 1462 aa13.05□□□□□ -0.32
COL5A2-201ENST00000374866 TMEM110-MUSTN1A8MSY1 372 aa13.05□□□□□ -0.32
COL5A2-201ENST00000374866 NAPBQ9H115 298 aa13.05□□□□□ -0.32
COL5A2-201ENST00000374866 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 IQCEQ6IPM2 695 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 STARD3NLO95772 234 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 CKAP2LQ8IYA6 745 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 FAM107BQ9H098 131 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
COL5A2-201ENST00000374866 HOOK3Q86VS8 718 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 GRPEL1Q9HAV7 217 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 HAND2P61296 217 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 FKBP15Q5T1M5 1219 aa13.04□□□□□ -0.32
COL5A2-201ENST00000374866 PABPN1LA6NDY0 278 aaKnown RBP13.04□□□□□ -0.32
COL5A2-201ENST00000374866 NOP2P46087 812 aaKnown RBP13.04□□□□□ -0.32
COL5A2-201ENST00000374866 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
COL5A2-201ENST00000374866 URI1O94763 535 aaPredicted RBP13.03□□□□□ -0.32
COL5A2-201ENST00000374866 TXLNBQ8N3L3 684 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 WDHD1O75717 1129 aaPredicted RBP13.03□□□□□ -0.32
COL5A2-201ENST00000374866 HLTFQ14527 1009 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL5A2-201ENST00000374866 ZSWIM4Q9H7M6 989 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
COL5A2-201ENST00000374866 CRACR2AQ9BSW2 395 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 F6X3S4 739 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 RAPGEF3O95398 923 aa13.03□□□□□ -0.32
COL5A2-201ENST00000374866 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
COL5A2-201ENST00000374866 MYO1BO43795 1136 aa13.02□□□□□ -0.32
COL5A2-201ENST00000374866 CETN2P41208 172 aa13.02□□□□□ -0.32
COL5A2-201ENST00000374866 TMCO4Q5TGY1 634 aa13.02□□□□□ -0.32
COL5A2-201ENST00000374866 GPATCH11Q8N954 259 aa13.02□□□□□ -0.32
COL5A2-201ENST00000374866 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
COL5A2-201ENST00000374866 RNF216Q9NWF9 866 aaPredicted RBP13.02□□□□□ -0.33
COL5A2-201ENST00000374866 KIF4BQ2VIQ3 1234 aa13.02□□□□□ -0.33
COL5A2-201ENST00000374866 TSHZ3Q63HK5 1081 aa13.02□□□□□ -0.33
COL5A2-201ENST00000374866 ACSBG1Q96GR2 724 aa13.02□□□□□ -0.33
COL5A2-201ENST00000374866 SLC12A7Q9Y666 1083 aa13.02□□□□□ -0.33
COL5A2-201ENST00000374866 SMTNL1A8MU46 457 aa13.02□□□□□ -0.33
COL5A2-201ENST00000374866 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
COL5A2-201ENST00000374866 IPO4Q8TEX9 1081 aaKnown RBP13.01□□□□□ -0.33
COL5A2-201ENST00000374866 MCM2P49736 904 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
COL5A2-201ENST00000374866 ZBTB3Q9H5J0 574 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 SYNCQ9H7C4 482 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 FAM170AA1A519 330 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 PICALMQ13492 652 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 CCDC7Q96M83 1385 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
COL5A2-201ENST00000374866 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 MTIF2P46199 727 aaKnown RBP13□□□□□ -0.33
COL5A2-201ENST00000374866 WASF1Q92558 559 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 DNAI2Q9GZS0 605 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 KAT6BQ8WYB5 2073 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
COL5A2-201ENST00000374866 IDEP14735 1019 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 SPECC1Q5M775 1068 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
COL5A2-201ENST00000374866 ATP5J2-PTCD1G3V325 749 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 MAATS1Q7Z4T9 603 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 SSX2IPQ9Y2D8 614 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 CCDC40Q4G0X9 1142 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 SP4Q02446 784 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 KIF5CO60282 957 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 PPP1R14CQ8TAE6 165 aa12.99□□□□□ -0.33
COL5A2-201ENST00000374866 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 ZNF213O14771 459 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 TOP1P11387 765 aaKnown RBP12.98□□□□□ -0.33
COL5A2-201ENST00000374866 CNNM3Q8NE01 707 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 UBXN4Q92575 508 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 TFIP11Q9UBB9 837 aaKnown RBP12.98□□□□□ -0.33
COL5A2-201ENST00000374866 TMEM266Q2M3C6 531 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 PPARDQ03181 441 aa12.98□□□□□ -0.33
COL5A2-201ENST00000374866 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
COL5A2-201ENST00000374866 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
COL5A2-201ENST00000374866 SLC5A1P13866 664 aa12.97□□□□□ -0.33
COL5A2-201ENST00000374866 FERP16591 822 aa12.97□□□□□ -0.33
COL5A2-201ENST00000374866 DUSP27Q5VZP5 1158 aa12.97□□□□□ -0.33
COL5A2-201ENST00000374866 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms