RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 NLGN1Q8N2Q7 840 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 F8W031 263 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 HDGFL1Q5TGJ6 251 aa7.45□□□□□ -1.22
PTPN3-202ENST00000374541 DZIP1Q86YF9 867 aaKnown RBP7.45□□□□□ -1.22
PTPN3-202ENST00000374541 GOLGA6L10A6NI86 522 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 PDCP20941 246 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 HSP90AB2PQ58FF8 381 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 SLC12A5Q9H2X9 1139 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 SKIV2LQ15477 1246 aaKnown RBP7.44□□□□□ -1.22
PTPN3-202ENST00000374541 TTC39AQ5SRH9 613 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 LRRFIP2Q9Y608 721 aaKnown RBP7.44□□□□□ -1.22
PTPN3-202ENST00000374541 NINLQ9Y2I6 1382 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 GNAT3A8MTJ3 354 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 IQCEQ6IPM2 695 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 PDCL2Q8N4E4 241 aa7.44□□□□□ -1.22
PTPN3-202ENST00000374541 PCDH11XQ9BZA7 1347 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 PCDH11YQ9BZA8 1340 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 CDC45O75419 566 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 EPS15P42566 896 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 DEFB132Q7Z7B7 95 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 PPIP5K2O43314 1243 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 RAPGEF6Q8TEU7 1601 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 VPS37CA5D8V6 355 aaPredicted RBP7.43□□□□□ -1.22
PTPN3-202ENST00000374541 EZRP15311 586 aaKnown RBP7.43□□□□□ -1.22
PTPN3-202ENST00000374541 NME9Q86XW9 330 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
PTPN3-202ENST00000374541 ALDH1B1P30837 517 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 ABCF2Q9UG63 623 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 NSFL1CQ9UNZ2 370 aaKnown RBP7.43□□□□□ -1.22
PTPN3-202ENST00000374541 PDIA4P13667 645 aaKnown RBP7.43□□□□□ -1.22
PTPN3-202ENST00000374541 ERFEQ4G0M1 354 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 CCDC158Q5M9N0 1113 aa7.43□□□□□ -1.22
PTPN3-202ENST00000374541 CABP5Q9NP86 173 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 DACH1Q9UI36 760 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 NOD1Q9Y239 953 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 ZBTB3Q9H5J0 574 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 SPINK5Q9NQ38 1064 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-202ENST00000374541 ABCA8O94911 1581 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 CAMSAP2Q08AD1 1489 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 RALYLQ86SE5 291 aaKnown RBP7.42□□□□□ -1.22
PTPN3-202ENST00000374541 C2orf69Q8N8R5 385 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 TSPY26PQ9H489 355 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 PIM2Q9P1W9 311 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 CT47B1P0C2W7 299 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-202ENST00000374541 USP5P45974 858 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 GNAI1P63096 354 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 DAPK1P53355 1430 aa7.42□□□□□ -1.22
PTPN3-202ENST00000374541 HIP1O00291 1037 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 DZIP3Q86Y13 1208 aaKnown RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 CNKSR1Q969H4 720 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 HOOK2Q96ED9 719 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 PKNOX2Q96KN3 472 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 C22orf23Q9BZE7 217 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 PICK1Q9NRD5 415 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 NUP153P49790 1475 aaKnown RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 POLR3DP05423 398 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 AXDND1Q5T1B0 1012 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 JMYQ8N9B5 988 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 ZNF396Q96N95 335 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 NOS1P29475 1434 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 IQCA1LA6NCM1 817 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 KINO60870 393 aaKnown RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 IFIT1P09914 478 aaKnown RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 DPP8Q6V1X1 898 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 SMCR8Q8TEV9 937 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 ZNHIT6Q9NWK9 470 aaKnown RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 UGGT1Q9NYU2 1555 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 PRKAR2BP31323 418 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 PLS1Q14651 629 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 SDF4Q9BRK5 362 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 CSADQ9Y600 493 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 TXLNAP40222 546 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 EXOC6Q8TAG9 804 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 MAGEC2Q9UBF1 373 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-202ENST00000374541 PTPRMP28827 1452 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 LTKP29376 864 aa7.41□□□□□ -1.22
PTPN3-202ENST00000374541 TRIM5Q9C035 493 aa7.4□□□□□ -1.22
PTPN3-202ENST00000374541 CBFA2T2O43439 604 aa7.4□□□□□ -1.22
PTPN3-202ENST00000374541 LPXNO60711 386 aa7.4□□□□□ -1.22
PTPN3-202ENST00000374541 SART3Q15020 963 aaKnown RBP7.4□□□□□ -1.22
PTPN3-202ENST00000374541 METTL24Q5JXM2 366 aa7.4□□□□□ -1.22
PTPN3-202ENST00000374541 TTC21AQ8NDW8 1320 aa7.4□□□□□ -1.22
PTPN3-202ENST00000374541 TMEM2Q9UHN6 1383 aa7.4□□□□□ -1.22
PTPN3-202ENST00000374541 KIF2AO00139 706 aaPredicted RBP7.4□□□□□ -1.22
PTPN3-202ENST00000374541 KCNA4P22459 653 aa7.4□□□□□ -1.22
PTPN3-202ENST00000374541 RBM27Q9P2N5 1060 aaKnown RBP7.4□□□□□ -1.22
PTPN3-202ENST00000374541 SUPT6HQ7KZ85 1726 aaKnown RBP7.4□□□□□ -1.22
PTPN3-202ENST00000374541 DEF6Q9H4E7 631 aa7.4□□□□□ -1.23
PTPN3-202ENST00000374541 PRKRIP1Q9H875 184 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-202ENST00000374541 NFKBIBQ15653 356 aa7.4□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC152Q4G0S7 254 aa7.4□□□□□ -1.23
PTPN3-202ENST00000374541 GBP3Q9H0R5 595 aa7.4□□□□□ -1.23
PTPN3-202ENST00000374541 LRRC9Q6ZRR7 1453 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 PDILTQ8N807 584 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 CCDC112Q8NEF3 446 aa7.39□□□□□ -1.23
PTPN3-202ENST00000374541 SCAF11Q99590 1463 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms