RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 HYPKQ9NX55 129 aa21.11■□□□□ 0.97
PTPN20-203ENST00000374342 ITGB4P16144 1822 aa21.11■□□□□ 0.97
PTPN20-203ENST00000374342 NKX1-1Q15270 411 aaPredicted RBP21.1■□□□□ 0.97
PTPN20-203ENST00000374342 DDX21Q9NR30 783 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTPN20-203ENST00000374342 HMMRO75330 724 aa21.1■□□□□ 0.97
PTPN20-203ENST00000374342 KCPQ6ZWJ8 1503 aa21.09■□□□□ 0.97
PTPN20-203ENST00000374342 ERVV-2B6SEH9 535 aa21.09■□□□□ 0.97
PTPN20-203ENST00000374342 MSH5O43196 834 aa21.09■□□□□ 0.97
PTPN20-203ENST00000374342 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
PTPN20-203ENST00000374342 SNRPA1P09661 255 aaKnown RBP21.09■□□□□ 0.97
PTPN20-203ENST00000374342 UBTFL1P0CB47 393 aaPredicted RBP21.08■□□□□ 0.97
PTPN20-203ENST00000374342 MAP3K2Q9Y2U5 619 aa21.08■□□□□ 0.97
PTPN20-203ENST00000374342 LRRFIP2Q9Y608 721 aaKnown RBP21.08■□□□□ 0.97
PTPN20-203ENST00000374342 NWD2Q9ULI1 1742 aa21.08■□□□□ 0.97
PTPN20-203ENST00000374342 PDIA6Q15084 440 aa21.08■□□□□ 0.96
PTPN20-203ENST00000374342 BEND3Q5T5X7 828 aa21.08■□□□□ 0.96
PTPN20-203ENST00000374342 USP44Q9H0E7 712 aa21.08■□□□□ 0.96
PTPN20-203ENST00000374342 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
PTPN20-203ENST00000374342 AFDNP55196 1824 aaKnown RBP21.06■□□□□ 0.96
PTPN20-203ENST00000374342 MYL6BP14649 208 aa21.06■□□□□ 0.96
PTPN20-203ENST00000374342 AIMP1Q12904 312 aaKnown RBP21.06■□□□□ 0.96
PTPN20-203ENST00000374342 KSR2Q6VAB6 950 aa21.06■□□□□ 0.96
PTPN20-203ENST00000374342 ZBTB47Q9UFB7 747 aaPredicted RBP21.06■□□□□ 0.96
PTPN20-203ENST00000374342 NUTM2BA6NNL0 878 aaPredicted RBP21.05■□□□□ 0.96
PTPN20-203ENST00000374342 NUTM2EB1AL46 878 aaPredicted RBP21.05■□□□□ 0.96
PTPN20-203ENST00000374342 DDX58O95786 925 aaKnown RBP21.05■□□□□ 0.96
PTPN20-203ENST00000374342 NUTM2AQ8IVF1 878 aaPredicted RBP21.05■□□□□ 0.96
PTPN20-203ENST00000374342 IPO9Q96P70 1041 aaKnown RBP21.05■□□□□ 0.96
PTPN20-203ENST00000374342 TNS2Q63HR2 1409 aa21.04■□□□□ 0.96
PTPN20-203ENST00000374342 UBAP1LF5GYI3 381 aa21.04■□□□□ 0.96
PTPN20-203ENST00000374342 APBB1O00213 710 aa21.04■□□□□ 0.96
PTPN20-203ENST00000374342 BCL11AQ9H165 835 aa21.04■□□□□ 0.96
PTPN20-203ENST00000374342 USP16Q9Y5T5 823 aa21.04■□□□□ 0.96
PTPN20-203ENST00000374342 LRP6O75581 1613 aa21.04■□□□□ 0.96
PTPN20-203ENST00000374342 DOT1LQ8TEK3 1739 aa21.04■□□□□ 0.96
PTPN20-203ENST00000374342 PNMA6EA0A0J9YXQ4 647 aa21.02■□□□□ 0.96
PTPN20-203ENST00000374342 SEC24BO95487 1268 aa21.02■□□□□ 0.96
PTPN20-203ENST00000374342 PIP4K2AP48426 406 aaPredicted RBP21.02■□□□□ 0.96
PTPN20-203ENST00000374342 XAGE3Q8WTP9 111 aa21.02■□□□□ 0.96
PTPN20-203ENST00000374342 TMOD3Q9NYL9 352 aa21.02■□□□□ 0.95
PTPN20-203ENST00000374342 ALDH1L1O75891 902 aa21.01■□□□□ 0.95
PTPN20-203ENST00000374342 NBPF7P0C2Y1 421 aaPredicted RBP21.01■□□□□ 0.95
PTPN20-203ENST00000374342 ATP8B2P98198 1209 aa21.01■□□□□ 0.95
PTPN20-203ENST00000374342 NUP188Q5SRE5 1749 aa21.01■□□□□ 0.95
PTPN20-203ENST00000374342 SMARCA5O60264 1052 aaPredicted RBP21■□□□□ 0.95
PTPN20-203ENST00000374342 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
PTPN20-203ENST00000374342 CWF19L2Q2TBE0 894 aaKnown RBP21■□□□□ 0.95
PTPN20-203ENST00000374342 EXOC6BQ9Y2D4 811 aa21■□□□□ 0.95
PTPN20-203ENST00000374342 PTCD1O75127 700 aaKnown RBP20.99■□□□□ 0.95
PTPN20-203ENST00000374342 COPS6Q7L5N1 327 aa20.99■□□□□ 0.95
PTPN20-203ENST00000374342 KAT6BQ8WYB5 2073 aa20.98■□□□□ 0.95
PTPN20-203ENST00000374342 BMP2KLQ5H9B9 411 aa20.98■□□□□ 0.95
PTPN20-203ENST00000374342 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.98■□□□□ 0.95
PTPN20-203ENST00000374342 LRP10Q7Z4F1 713 aa20.98■□□□□ 0.95
PTPN20-203ENST00000374342 LINS1Q8NG48 757 aa20.98■□□□□ 0.95
PTPN20-203ENST00000374342 C9orf78Q9NZ63 289 aaPredicted RBP20.98■□□□□ 0.95
PTPN20-203ENST00000374342 SPATA31A1Q5TZJ5 1347 aa20.98■□□□□ 0.95
PTPN20-203ENST00000374342 SLIT2O94813 1529 aa20.97■□□□□ 0.95
PTPN20-203ENST00000374342 PLEKHM2Q8IWE5 1019 aa20.97■□□□□ 0.95
PTPN20-203ENST00000374342 ERICH6Q7L0X2 663 aa20.96■□□□□ 0.95
PTPN20-203ENST00000374342 C16orf71Q8IYS4 520 aaPredicted RBP20.96■□□□□ 0.95
PTPN20-203ENST00000374342 OTUD7AQ8TE49 926 aaPredicted RBP20.96■□□□□ 0.95
PTPN20-203ENST00000374342 NOP58Q9Y2X3 529 aaKnown RBP20.96■□□□□ 0.95
PTPN20-203ENST00000374342 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
PTPN20-203ENST00000374342 EXOC5O00471 708 aa20.96■□□□□ 0.95
PTPN20-203ENST00000374342 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
PTPN20-203ENST00000374342 PPP1R42Q7Z4L9 355 aa20.96■□□□□ 0.95
PTPN20-203ENST00000374342 UPF2Q9HAU5 1272 aaKnown RBP20.96■□□□□ 0.95
PTPN20-203ENST00000374342 IBTKQ9P2D0 1353 aaPredicted RBP20.96■□□□□ 0.95
PTPN20-203ENST00000374342 SSH3Q8TE77 659 aa20.95■□□□□ 0.94
PTPN20-203ENST00000374342 DDRGK1Q96HY6 314 aa20.95■□□□□ 0.94
PTPN20-203ENST00000374342 MYD88Q99836 296 aa20.94■□□□□ 0.94
PTPN20-203ENST00000374342 TUBGCP6Q96RT7 1819 aa20.94■□□□□ 0.94
PTPN20-203ENST00000374342 ANKRD13DQ6ZTN6 518 aa20.94■□□□□ 0.94
PTPN20-203ENST00000374342 PIGBQ92521 554 aa20.94■□□□□ 0.94
PTPN20-203ENST00000374342 BCL9O00512 1426 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 NBPF26B4DH59 902 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 GRM8O00222 908 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 SRGAP3O43295 1099 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 IGKV5-2P06315 115 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 POLA2Q14181 598 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 NBPF14Q5TI25 921 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 NBPF10Q6P3W6 841 aaKnown RBP20.93■□□□□ 0.94
PTPN20-203ENST00000374342 NBPF15Q8N660 670 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
PTPN20-203ENST00000374342 CDCA7Q9BWT1 371 aaPredicted RBP20.93■□□□□ 0.94
PTPN20-203ENST00000374342 LRRCC1Q9C099 1032 aa20.93■□□□□ 0.94
PTPN20-203ENST00000374342 GSPT1P15170 499 aaKnown RBP20.92■□□□□ 0.94
PTPN20-203ENST00000374342 TTC22Q5TAA0 569 aa20.92■□□□□ 0.94
PTPN20-203ENST00000374342 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
PTPN20-203ENST00000374342 THRAP3Q9Y2W1 955 aaKnown RBP20.92■□□□□ 0.94
PTPN20-203ENST00000374342 CCDC9Q9Y3X0 531 aaKnown RBP20.92■□□□□ 0.94
PTPN20-203ENST00000374342 JCADQ9P266 1359 aa20.92■□□□□ 0.94
PTPN20-203ENST00000374342 SPATA31A5Q5VU36 1347 aa20.92■□□□□ 0.94
PTPN20-203ENST00000374342 SPATA31A7Q8IWB4 1347 aa20.92■□□□□ 0.94
PTPN20-203ENST00000374342 NEURL1BA8MQ27 555 aa20.92■□□□□ 0.94
PTPN20-203ENST00000374342 MFAP1P55081 439 aaKnown RBP20.92■□□□□ 0.94
PTPN20-203ENST00000374342 TJP1Q07157 1748 aa20.91■□□□□ 0.94
PTPN20-203ENST00000374342 UTYO14607 1347 aa20.9■□□□□ 0.94
PTPN20-203ENST00000374342 A1BGP04217 495 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms