RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 PDIA6Q15084 440 aa22.48■■□□□ 1.19
C9orf43-202ENST00000374165 NOB1Q9ULX3 412 aaKnown RBP22.48■■□□□ 1.19
C9orf43-202ENST00000374165 CACNA1FO60840 1977 aa22.48■■□□□ 1.19
C9orf43-202ENST00000374165 C20orf194Q5TEA3 1177 aa22.48■■□□□ 1.19
C9orf43-202ENST00000374165 VSIG10Q8N0Z9 540 aa22.48■■□□□ 1.19
C9orf43-202ENST00000374165 LAMB4A4D0S4 1761 aa22.47■■□□□ 1.19
C9orf43-202ENST00000374165 TJP1Q07157 1748 aa22.47■■□□□ 1.19
C9orf43-202ENST00000374165 BRPF1P55201 1214 aaPredicted RBP22.47■■□□□ 1.19
C9orf43-202ENST00000374165 ITPK1Q13572 414 aa22.47■■□□□ 1.19
C9orf43-202ENST00000374165 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
C9orf43-202ENST00000374165 A1BGP04217 495 aa22.46■■□□□ 1.19
C9orf43-202ENST00000374165 ATP6V1AP38606 617 aa22.46■■□□□ 1.19
C9orf43-202ENST00000374165 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
C9orf43-202ENST00000374165 PHAXQ9H814 394 aaKnown RBP22.46■■□□□ 1.19
C9orf43-202ENST00000374165 NBPF26B4DH59 902 aa22.45■■□□□ 1.18
C9orf43-202ENST00000374165 NBPF14Q5TI25 921 aa22.45■■□□□ 1.18
C9orf43-202ENST00000374165 NBPF10Q6P3W6 841 aaKnown RBP22.45■■□□□ 1.18
C9orf43-202ENST00000374165 NBPF15Q8N660 670 aa22.45■■□□□ 1.18
C9orf43-202ENST00000374165 DBF4Q9UBU7 674 aaPredicted RBP22.45■■□□□ 1.18
C9orf43-202ENST00000374165 LY75O60449 1722 aa22.45■■□□□ 1.18
C9orf43-202ENST00000374165 CYP19A1P11511 503 aaPredicted RBP22.43■■□□□ 1.18
C9orf43-202ENST00000374165 MYL6BP14649 208 aa22.43■■□□□ 1.18
C9orf43-202ENST00000374165 CLUAP1Q96AJ1 413 aa22.43■■□□□ 1.18
C9orf43-202ENST00000374165 MYH14Q7Z406 1995 aaKnown RBP22.43■■□□□ 1.18
C9orf43-202ENST00000374165 TRIM27P14373 513 aa22.43■■□□□ 1.18
C9orf43-202ENST00000374165 LRP10Q7Z4F1 713 aa22.43■■□□□ 1.18
C9orf43-202ENST00000374165 DDX21Q9NR30 783 aaKnown RBP eCLIP22.42■■□□□ 1.18
C9orf43-202ENST00000374165 PPP4R2Q9NY27 417 aa22.42■■□□□ 1.18
C9orf43-202ENST00000374165 RLBP1P12271 317 aa22.41■■□□□ 1.18
C9orf43-202ENST00000374165 KIF16BQ96L93 1317 aa22.41■■□□□ 1.18
C9orf43-202ENST00000374165 CANXP27824 592 aaKnown RBP22.41■■□□□ 1.18
C9orf43-202ENST00000374165 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
C9orf43-202ENST00000374165 FLIIQ13045 1269 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 ZKSCAN2Q63HK3 967 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 ATF7IPQ6VMQ6 1270 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 LRRC4BQ9NT99 713 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 TNS1Q9HBL0 1735 aaKnown RBP22.4■■□□□ 1.18
C9orf43-202ENST00000374165 STARD3NLO95772 234 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 APBA3O96018 575 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 PROM2Q8N271 834 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 PANK1Q8TE04 598 aa22.4■■□□□ 1.18
C9orf43-202ENST00000374165 ZNF831Q5JPB2 1677 aa22.39■■□□□ 1.18
C9orf43-202ENST00000374165 LINC00116Q8NCU8 138 aa22.39■■□□□ 1.17
C9orf43-202ENST00000374165 CCNL1Q9UK58 526 aaPredicted RBP22.39■■□□□ 1.17
C9orf43-202ENST00000374165 COL5A3P25940 1745 aaPredicted RBP22.39■■□□□ 1.17
C9orf43-202ENST00000374165 CICQ96RK0 1608 aaPredicted RBP22.38■■□□□ 1.17
C9orf43-202ENST00000374165 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.38■■□□□ 1.17
C9orf43-202ENST00000374165 ZBTB1Q9Y2K1 713 aa22.38■■□□□ 1.17
C9orf43-202ENST00000374165 INTS5Q6P9B9 1019 aaKnown RBP22.38■■□□□ 1.17
C9orf43-202ENST00000374165 CHMP4AQ9BY43 222 aa22.38■■□□□ 1.17
C9orf43-202ENST00000374165 TAF1LQ8IZX4 1826 aa22.38■■□□□ 1.17
C9orf43-202ENST00000374165 F6X3S4 739 aa22.37■■□□□ 1.17
C9orf43-202ENST00000374165 CRKLP46109 303 aaKnown RBP22.37■■□□□ 1.17
C9orf43-202ENST00000374165 AIMP1Q12904 312 aaKnown RBP22.37■■□□□ 1.17
C9orf43-202ENST00000374165 HYPKQ9NX55 129 aa22.37■■□□□ 1.17
C9orf43-202ENST00000374165 FKBP5Q13451 457 aaPredicted RBP22.36■■□□□ 1.17
C9orf43-202ENST00000374165 ARHGAP45Q92619 1136 aa22.36■■□□□ 1.17
C9orf43-202ENST00000374165 IPO8O15397 1037 aaKnown RBP22.36■■□□□ 1.17
C9orf43-202ENST00000374165 COPS6Q7L5N1 327 aa22.36■■□□□ 1.17
C9orf43-202ENST00000374165 XAGE3Q8WTP9 111 aa22.35■■□□□ 1.17
C9orf43-202ENST00000374165 PTPRCP08575 1304 aa22.34■■□□□ 1.17
C9orf43-202ENST00000374165 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
C9orf43-202ENST00000374165 PLSCR1O15162 318 aa22.34■■□□□ 1.17
C9orf43-202ENST00000374165 SMIM5Q71RC9 77 aa22.34■■□□□ 1.17
C9orf43-202ENST00000374165 DZIP1LQ8IYY4 767 aaKnown RBP22.34■■□□□ 1.17
C9orf43-202ENST00000374165 ZNF330Q9Y3S2 320 aaPredicted RBP22.34■■□□□ 1.17
C9orf43-202ENST00000374165 PDE3AQ14432 1141 aa22.33■■□□□ 1.17
C9orf43-202ENST00000374165 TXNRD1Q16881 649 aa22.33■■□□□ 1.17
C9orf43-202ENST00000374165 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.17
C9orf43-202ENST00000374165 PI4KAP2A4QPH2 592 aa22.33■■□□□ 1.16
C9orf43-202ENST00000374165 PI4KAP1Q8N8J0 262 aa22.33■■□□□ 1.16
C9orf43-202ENST00000374165 CCDC87Q9NVE4 849 aa22.33■■□□□ 1.16
C9orf43-202ENST00000374165 COG6Q9Y2V7 657 aa22.33■■□□□ 1.16
C9orf43-202ENST00000374165 B4GALNT3Q6L9W6 998 aa22.32■■□□□ 1.16
C9orf43-202ENST00000374165 TTLL7Q6ZT98 887 aa22.32■■□□□ 1.16
C9orf43-202ENST00000374165 CRBNQ96SW2 442 aa22.32■■□□□ 1.16
C9orf43-202ENST00000374165 ADCY9O60503 1353 aa22.32■■□□□ 1.16
C9orf43-202ENST00000374165 AMIGO3Q86WK7 504 aa22.31■■□□□ 1.16
C9orf43-202ENST00000374165 FTSJ3Q8IY81 847 aaKnown RBP22.31■■□□□ 1.16
C9orf43-202ENST00000374165 TMEM57Q8N5G2 664 aa22.31■■□□□ 1.16
C9orf43-202ENST00000374165 RREB1Q92766 1687 aa22.31■■□□□ 1.16
C9orf43-202ENST00000374165 ABCC4O15439 1325 aa22.31■■□□□ 1.16
C9orf43-202ENST00000374165 API5Q9BZZ5 524 aaKnown RBP22.31■■□□□ 1.16
C9orf43-202ENST00000374165 EXOC6Q8TAG9 804 aa22.3■■□□□ 1.16
C9orf43-202ENST00000374165 SLC4A10Q6U841 1118 aa22.3■■□□□ 1.16
C9orf43-202ENST00000374165 EIF5P55010 431 aaKnown RBP22.29■■□□□ 1.16
C9orf43-202ENST00000374165 EN1Q05925 392 aaPredicted RBP22.29■■□□□ 1.16
C9orf43-202ENST00000374165 SLC27A3Q5K4L6 730 aa22.29■■□□□ 1.16
C9orf43-202ENST00000374165 C4BP0C0L5 1744 aa22.29■■□□□ 1.16
C9orf43-202ENST00000374165 IL6STP40189 918 aaPredicted RBP22.28■■□□□ 1.16
C9orf43-202ENST00000374165 ANKRD13DQ6ZTN6 518 aa22.28■■□□□ 1.16
C9orf43-202ENST00000374165 MAP3K2Q9Y2U5 619 aa22.28■■□□□ 1.16
C9orf43-202ENST00000374165 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
C9orf43-202ENST00000374165 KSR2Q6VAB6 950 aa22.28■■□□□ 1.16
C9orf43-202ENST00000374165 DEFB132Q7Z7B7 95 aa22.28■■□□□ 1.16
C9orf43-202ENST00000374165 EZH2Q15910 746 aaKnown RBP22.26■■□□□ 1.15
C9orf43-202ENST00000374165 ARXQ96QS3 562 aa22.26■■□□□ 1.15
C9orf43-202ENST00000374165 CAMKK2Q96RR4 588 aa22.26■■□□□ 1.15
C9orf43-202ENST00000374165 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
C9orf43-202ENST00000374165 DNAAF4Q8WXU2 420 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms