RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 USP6P35125 1406 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 RNF20Q5VTR2 975 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 JAKMIP1Q96N16 626 aaKnown RBP9.37□□□□□ -0.91
HERC4-202ENST00000373700 PPFIA3O75145 1194 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 PHF14O94880 888 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 LARP1Q6PKG0 1096 aaKnown RBP9.37□□□□□ -0.91
HERC4-202ENST00000373700 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 VPS37DQ86XT2 251 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 CEP85Q6P2H3 762 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 AXIN2Q9Y2T1 843 aa9.37□□□□□ -0.91
HERC4-202ENST00000373700 USP19O94966 1318 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 CAMSAP1Q5T5Y3 1602 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 CCDC57Q2TAC2 916 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 PLEKHM2Q8IWE5 1019 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 FAM43AQ8N2R8 423 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 FRMPD1Q5SYB0 1578 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 NBPF7P0C2Y1 421 aaPredicted RBP9.36□□□□□ -0.91
HERC4-202ENST00000373700 PDE1AP54750 535 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 ZNF496Q96IT1 587 aaPredicted RBP9.36□□□□□ -0.91
HERC4-202ENST00000373700 A1BGP04217 495 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 SNRPA1P09661 255 aaKnown RBP9.36□□□□□ -0.91
HERC4-202ENST00000373700 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
HERC4-202ENST00000373700 CHAF1AQ13111 956 aaPredicted RBP9.36□□□□□ -0.91
HERC4-202ENST00000373700 PRPF40BQ6NWY9 871 aaKnown RBP9.36□□□□□ -0.91
HERC4-202ENST00000373700 TBC1D2BQ9UPU7 963 aa9.36□□□□□ -0.91
HERC4-202ENST00000373700 PNMA6EA0A0J9YXQ4 647 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 SYCE3A1L190 88 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 KIF1BPQ96EK5 621 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 HYPKQ9NX55 129 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 TCEANC2Q96MN5 208 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
HERC4-202ENST00000373700 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 PIK3R4Q99570 1358 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 STARD3NLO95772 234 aa9.35□□□□□ -0.91
HERC4-202ENST00000373700 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
HERC4-202ENST00000373700 INSRP06213 1382 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 HTATSF1O43719 755 aaKnown RBP9.34□□□□□ -0.91
HERC4-202ENST00000373700 ZNF790Q6PG37 636 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 CCDC83Q8IWF9 413 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 USP16Q9Y5T5 823 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 CYP46A1Q9Y6A2 500 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 NPHP4O75161 1426 aaPredicted RBP9.34□□□□□ -0.91
HERC4-202ENST00000373700 DIP2BQ9P265 1576 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 NEXMIFQ5QGS0 1516 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 IL2RBP14784 551 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 PROSER3Q2NL68 480 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 CREBRFQ8IUR6 639 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 ZGPATQ8N5A5 531 aaKnown RBP9.34□□□□□ -0.91
HERC4-202ENST00000373700 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.34□□□□□ -0.91
HERC4-202ENST00000373700 QRICH2Q9H0J4 1663 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 G3V3G9 751 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 CPLX1O14810 134 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
HERC4-202ENST00000373700 CWC22Q9HCG8 908 aaKnown RBP9.34□□□□□ -0.91
HERC4-202ENST00000373700 BAG4O95429 457 aaKnown RBP9.33□□□□□ -0.92
HERC4-202ENST00000373700 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 DDX11Q96FC9 970 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 FAM13BQ9NYF5 915 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 PIK3C2BO00750 1634 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 PTPRMP28827 1452 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 MCM2P49736 904 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 LMBR1LQ6UX01 489 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 ARHGEF25Q86VW2 580 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 TRMT112Q9UI30 125 aaKnown RBP9.33□□□□□ -0.92
HERC4-202ENST00000373700 NDUFB9Q9Y6M9 179 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 LMTK2Q8IWU2 1503 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 KIAA0232Q92628 1395 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 FAM135BQ49AJ0 1406 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 XRCC6P12956 609 aaKnown RBP eCLIP9.33□□□□□ -0.92
HERC4-202ENST00000373700 FAM182BQ5T319 152 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 KLHL34Q8N239 644 aa9.33□□□□□ -0.92
HERC4-202ENST00000373700 R3HCC1Q9Y3T6 440 aaKnown RBP9.33□□□□□ -0.92
HERC4-202ENST00000373700 BECN2A8MW95 431 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 LARP1BQ659C4 914 aaKnown RBP9.32□□□□□ -0.92
HERC4-202ENST00000373700 PDRG1Q9NUG6 133 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 LMTK3Q96Q04 1460 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 GRM8O00222 908 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 EIF4A1P60842 406 aaKnown RBP9.32□□□□□ -0.92
HERC4-202ENST00000373700 KSR2Q6VAB6 950 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 MPHOSPH8Q99549 860 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 MROH2AA6NES4 1674 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 GLRX3O76003 335 aaKnown RBP9.32□□□□□ -0.92
HERC4-202ENST00000373700 HSP90AA2PQ14568 343 aaPredicted RBP9.32□□□□□ -0.92
HERC4-202ENST00000373700 ERC1Q8IUD2 1116 aa9.32□□□□□ -0.92
HERC4-202ENST00000373700 ATP7BP35670 1465 aa9.31□□□□□ -0.92
HERC4-202ENST00000373700 GOLGA6L6A8MZA4 724 aa9.31□□□□□ -0.92
HERC4-202ENST00000373700 ESPNB1AK53 854 aa9.31□□□□□ -0.92
HERC4-202ENST00000373700 RRP12Q5JTH9 1297 aaKnown RBP9.31□□□□□ -0.92
HERC4-202ENST00000373700 TTC39AQ5SRH9 613 aa9.31□□□□□ -0.92
HERC4-202ENST00000373700 BLOC1S2Q6QNY1 142 aa9.31□□□□□ -0.92
HERC4-202ENST00000373700 SPC24Q8NBT2 197 aa9.31□□□□□ -0.92
HERC4-202ENST00000373700 GOLGA6L19H0YKK7 550 aa9.31□□□□□ -0.92
HERC4-202ENST00000373700 RAD21O60216 631 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 412.6 ms