RNA–Protein interactions for RNA: ENST00000373647.8

RABGAP1-202, Transcript of RAB GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGAP1, Length 4,997 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-202ENST00000373647 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
RABGAP1-202ENST00000373647 VPS72Q15906 364 aa12.38□□□□□ -0.43
RABGAP1-202ENST00000373647 ZNF646O15015 1829 aaPredicted RBP12.38□□□□□ -0.43
RABGAP1-202ENST00000373647 FLIIQ13045 1269 aa12.37□□□□□ -0.43
RABGAP1-202ENST00000373647 NLRP2Q9NX02 1062 aa12.37□□□□□ -0.43
RABGAP1-202ENST00000373647 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
RABGAP1-202ENST00000373647 ELL2O00472 640 aaPredicted RBP12.37□□□□□ -0.43
RABGAP1-202ENST00000373647 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
RABGAP1-202ENST00000373647 AKAP11Q9UKA4 1901 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 MTX1Q13505 466 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
RABGAP1-202ENST00000373647 LTBP1Q14766 1721 aa12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 RAPGEF4Q8WZA2 1011 aa12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 PIGBQ92521 554 aa12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 DDX21Q9NR30 783 aaKnown RBP eCLIP12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 IGKV5-2P06315 115 aa12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 POLA2Q14181 598 aa12.35□□□□□ -0.43
RABGAP1-202ENST00000373647 MS4A1P11836 297 aa12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 NEFMP07197 916 aa12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 DOCK2Q92608 1830 aa12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 CCDC30Q5VVM6 783 aa12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 CCDC136Q96JN2 1154 aa12.34□□□□□ -0.43
RABGAP1-202ENST00000373647 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.43
RABGAP1-202ENST00000373647 MEIS3Q99687 375 aa12.33□□□□□ -0.43
RABGAP1-202ENST00000373647 HSP90AB1P08238 724 aaKnown RBP12.33□□□□□ -0.44
RABGAP1-202ENST00000373647 NUCB1Q02818 461 aa12.33□□□□□ -0.44
RABGAP1-202ENST00000373647 UNC5CLQ8IV45 518 aa12.33□□□□□ -0.44
RABGAP1-202ENST00000373647 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
RABGAP1-202ENST00000373647 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
RABGAP1-202ENST00000373647 SLC39A6Q13433 755 aa12.33□□□□□ -0.44
RABGAP1-202ENST00000373647 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
RABGAP1-202ENST00000373647 TOM1L2Q6ZVM7 507 aa12.32□□□□□ -0.44
RABGAP1-202ENST00000373647 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
RABGAP1-202ENST00000373647 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 CDCA7Q9BWT1 371 aaPredicted RBP12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 F6X3S4 739 aa12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 HSPA1LP34931 641 aa12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 TAF1P21675 1872 aa12.31□□□□□ -0.44
RABGAP1-202ENST00000373647 TNRC6CQ9HCJ0 1690 aaKnown RBP12.3□□□□□ -0.44
RABGAP1-202ENST00000373647 LRRC37AA6NMS7 1700 aa12.3□□□□□ -0.44
RABGAP1-202ENST00000373647 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
RABGAP1-202ENST00000373647 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
RABGAP1-202ENST00000373647 ANKRD31Q8N7Z5 1873 aa12.3□□□□□ -0.44
RABGAP1-202ENST00000373647 GOLGB1Q14789 3259 aaKnown RBP12.3□□□□□ -0.44
RABGAP1-202ENST00000373647 MYH7P12883 1935 aa12.3□□□□□ -0.44
RABGAP1-202ENST00000373647 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
RABGAP1-202ENST00000373647 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
RABGAP1-202ENST00000373647 ASAP1Q9ULH1 1129 aa12.29□□□□□ -0.44
RABGAP1-202ENST00000373647 CCT4P50991 539 aaKnown RBP12.28□□□□□ -0.44
RABGAP1-202ENST00000373647 TEFQ10587 303 aa12.28□□□□□ -0.44
RABGAP1-202ENST00000373647 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
RABGAP1-202ENST00000373647 SNRPA1P09661 255 aaKnown RBP12.28□□□□□ -0.44
RABGAP1-202ENST00000373647 KSR2Q6VAB6 950 aa12.28□□□□□ -0.44
RABGAP1-202ENST00000373647 PTF1AQ7RTS3 328 aa12.27□□□□□ -0.44
RABGAP1-202ENST00000373647 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
RABGAP1-202ENST00000373647 CYP19A1P11511 503 aaPredicted RBP12.27□□□□□ -0.45
RABGAP1-202ENST00000373647 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
RABGAP1-202ENST00000373647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.45
RABGAP1-202ENST00000373647 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
RABGAP1-202ENST00000373647 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
RABGAP1-202ENST00000373647 HYPKQ9NX55 129 aa12.27□□□□□ -0.45
RABGAP1-202ENST00000373647 INTS5Q6P9B9 1019 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 ANXA1P04083 346 aa12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 TRIM28Q13263 835 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 PI4KAP2A4QPH2 592 aa12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 PI4KAP1Q8N8J0 262 aa12.26□□□□□ -0.45
RABGAP1-202ENST00000373647 STRN4Q9NRL3 753 aa12.25□□□□□ -0.45
RABGAP1-202ENST00000373647 ALDH1L1O75891 902 aa12.25□□□□□ -0.45
RABGAP1-202ENST00000373647 ITPRIPQ8IWB1 547 aa12.25□□□□□ -0.45
RABGAP1-202ENST00000373647 KIF13BQ9NQT8 1826 aa12.24□□□□□ -0.45
RABGAP1-202ENST00000373647 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
RABGAP1-202ENST00000373647 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
RABGAP1-202ENST00000373647 DLEC1Q9Y238 1755 aa12.24□□□□□ -0.45
RABGAP1-202ENST00000373647 NEURL1BA8MQ27 555 aa12.24□□□□□ -0.45
RABGAP1-202ENST00000373647 DNAAF4Q8WXU2 420 aa12.24□□□□□ -0.45
RABGAP1-202ENST00000373647 RBM19Q9Y4C8 960 aaKnown RBP12.24□□□□□ -0.45
RABGAP1-202ENST00000373647 LINS1Q8NG48 757 aa12.23□□□□□ -0.45
RABGAP1-202ENST00000373647 METTL22Q9BUU2 404 aaPredicted RBP12.23□□□□□ -0.45
RABGAP1-202ENST00000373647 GCC1Q96CN9 775 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms