RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ROCK2O75116 1388 aaKnown RBP17.54■□□□□ 0.4
HDAC8-204ENST00000373560 NFKBIEO00221 500 aa17.54■□□□□ 0.4
HDAC8-204ENST00000373560 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
HDAC8-204ENST00000373560 SMG6Q86US8 1419 aaKnown RBP17.54■□□□□ 0.4
HDAC8-204ENST00000373560 PASKQ96RG2 1323 aa17.53■□□□□ 0.4
HDAC8-204ENST00000373560 TMOD3Q9NYL9 352 aa17.53■□□□□ 0.4
HDAC8-204ENST00000373560 THSD7BQ9C0I4 1608 aa17.53■□□□□ 0.4
HDAC8-204ENST00000373560 RFC4P35249 363 aa17.52■□□□□ 0.4
HDAC8-204ENST00000373560 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
HDAC8-204ENST00000373560 COG3Q96JB2 828 aa17.52■□□□□ 0.4
HDAC8-204ENST00000373560 NCAPD2Q15021 1401 aa17.52■□□□□ 0.4
HDAC8-204ENST00000373560 TJP1Q07157 1748 aa17.52■□□□□ 0.39
HDAC8-204ENST00000373560 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.39
HDAC8-204ENST00000373560 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
HDAC8-204ENST00000373560 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
HDAC8-204ENST00000373560 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
HDAC8-204ENST00000373560 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
HDAC8-204ENST00000373560 POLRMTO00411 1230 aaKnown RBP17.49■□□□□ 0.39
HDAC8-204ENST00000373560 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
HDAC8-204ENST00000373560 INSRP06213 1382 aa17.49■□□□□ 0.39
HDAC8-204ENST00000373560 COL11A2P13942 1736 aaPredicted RBP17.49■□□□□ 0.39
HDAC8-204ENST00000373560 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
HDAC8-204ENST00000373560 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
HDAC8-204ENST00000373560 TERF2IPQ9NYB0 399 aa17.48■□□□□ 0.39
HDAC8-204ENST00000373560 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
HDAC8-204ENST00000373560 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
HDAC8-204ENST00000373560 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.39
HDAC8-204ENST00000373560 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
HDAC8-204ENST00000373560 PDE4DIPQ5VU43 2346 aa17.46■□□□□ 0.38
HDAC8-204ENST00000373560 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
HDAC8-204ENST00000373560 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
HDAC8-204ENST00000373560 CACNA1SQ13698 1873 aa17.45■□□□□ 0.38
HDAC8-204ENST00000373560 TMEM88BA6NKF7 163 aa17.44■□□□□ 0.38
HDAC8-204ENST00000373560 FLT4P35916 1363 aa17.43■□□□□ 0.38
HDAC8-204ENST00000373560 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
HDAC8-204ENST00000373560 PHKG2P15735 406 aa17.43■□□□□ 0.38
HDAC8-204ENST00000373560 TM4SF1P30408 202 aa17.43■□□□□ 0.38
HDAC8-204ENST00000373560 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
HDAC8-204ENST00000373560 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
HDAC8-204ENST00000373560 SCN4AP35499 1836 aa17.42■□□□□ 0.38
HDAC8-204ENST00000373560 ANKRD26Q9UPS8 1709 aa17.42■□□□□ 0.38
HDAC8-204ENST00000373560 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
HDAC8-204ENST00000373560 ERFEQ4G0M1 354 aa17.41■□□□□ 0.38
HDAC8-204ENST00000373560 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
HDAC8-204ENST00000373560 CLEC11AQ9Y240 323 aa17.41■□□□□ 0.38
HDAC8-204ENST00000373560 WDR33Q9C0J8 1336 aaKnown RBP17.41■□□□□ 0.38
HDAC8-204ENST00000373560 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
HDAC8-204ENST00000373560 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
HDAC8-204ENST00000373560 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
HDAC8-204ENST00000373560 LDHDQ86WU2 507 aa17.39■□□□□ 0.37
HDAC8-204ENST00000373560 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
HDAC8-204ENST00000373560 MCOLN1Q9GZU1 580 aa17.39■□□□□ 0.37
HDAC8-204ENST00000373560 EMILIN1Q9Y6C2 1016 aa17.39■□□□□ 0.37
HDAC8-204ENST00000373560 CASP8AP2Q9UKL3 1982 aa17.39■□□□□ 0.37
HDAC8-204ENST00000373560 FYB1O15117 783 aa17.38■□□□□ 0.37
HDAC8-204ENST00000373560 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
HDAC8-204ENST00000373560 USPL1Q5W0Q7 1092 aa17.38■□□□□ 0.37
HDAC8-204ENST00000373560 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
HDAC8-204ENST00000373560 C2CD5Q86YS7 1000 aa17.37■□□□□ 0.37
HDAC8-204ENST00000373560 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
HDAC8-204ENST00000373560 PITPNM1O00562 1244 aa17.36■□□□□ 0.37
HDAC8-204ENST00000373560 MAP2K1Q02750 393 aaPredicted RBP17.36■□□□□ 0.37
HDAC8-204ENST00000373560 NFIXQ14938 502 aa17.36■□□□□ 0.37
HDAC8-204ENST00000373560 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
HDAC8-204ENST00000373560 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
HDAC8-204ENST00000373560 C21orf2O43822 256 aa17.35■□□□□ 0.37
HDAC8-204ENST00000373560 FMR1Q06787 632 aaKnown RBP eCLIP17.35■□□□□ 0.37
HDAC8-204ENST00000373560 PTCD1O75127 700 aaKnown RBP17.34■□□□□ 0.37
HDAC8-204ENST00000373560 EAPPQ56P03 285 aaPredicted RBP17.34■□□□□ 0.37
HDAC8-204ENST00000373560 INTS5Q6P9B9 1019 aaKnown RBP17.34■□□□□ 0.37
HDAC8-204ENST00000373560 EYA1Q99502 592 aa17.34■□□□□ 0.37
HDAC8-204ENST00000373560 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.37
HDAC8-204ENST00000373560 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
HDAC8-204ENST00000373560 BCL2L12Q9HB09 334 aa17.33■□□□□ 0.36
HDAC8-204ENST00000373560 KIF24Q5T7B8 1368 aa17.32■□□□□ 0.36
HDAC8-204ENST00000373560 ZNF541Q9H0D2 1346 aa17.32■□□□□ 0.36
HDAC8-204ENST00000373560 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
HDAC8-204ENST00000373560 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
HDAC8-204ENST00000373560 SERPINB2P05120 415 aa17.31■□□□□ 0.36
HDAC8-204ENST00000373560 GRM1Q13255 1194 aa17.31■□□□□ 0.36
HDAC8-204ENST00000373560 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
HDAC8-204ENST00000373560 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
HDAC8-204ENST00000373560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■■□□□ 14.2
HDAC8-204ENST00000373560 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-204ENST00000373560 SOX10P56693 466 aa17.3■□□□□ 0.36
HDAC8-204ENST00000373560 CAPNS2Q96L46 248 aa17.3■□□□□ 0.36
HDAC8-204ENST00000373560 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
HDAC8-204ENST00000373560 AOC2O75106 756 aa17.29■□□□□ 0.36
HDAC8-204ENST00000373560 CCDC24Q8N4L8 307 aa17.29■□□□□ 0.36
HDAC8-204ENST00000373560 TAOK3Q9H2K8 898 aa17.29■□□□□ 0.36
HDAC8-204ENST00000373560 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
HDAC8-204ENST00000373560 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
HDAC8-204ENST00000373560 H0YIN7 160 aa17.28■□□□□ 0.36
HDAC8-204ENST00000373560 CHRDL2Q6WN34 429 aa17.28■□□□□ 0.36
HDAC8-204ENST00000373560 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
HDAC8-204ENST00000373560 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
HDAC8-204ENST00000373560 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
HDAC8-204ENST00000373560 TRPM7Q96QT4 1865 aa17.28■□□□□ 0.36
HDAC8-204ENST00000373560 ZPR1O75312 459 aa17.27■□□□□ 0.36
HDAC8-204ENST00000373560 DGKZQ13574 1117 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms