RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 HTATSF1O43719 755 aaKnown RBP24.01■■□□□ 1.43
TRAPPC3-202ENST00000373162 TM4SF1P30408 202 aa24■■□□□ 1.43
TRAPPC3-202ENST00000373162 RALBP1Q15311 655 aa24■■□□□ 1.43
TRAPPC3-202ENST00000373162 TTC5Q8N0Z6 440 aa24■■□□□ 1.43
TRAPPC3-202ENST00000373162 BCL2L12Q9HB09 334 aa24■■□□□ 1.43
TRAPPC3-202ENST00000373162 KDM3BQ7LBC6 1761 aa24■■□□□ 1.43
TRAPPC3-202ENST00000373162 AFDNP55196 1824 aaKnown RBP23.99■■□□□ 1.43
TRAPPC3-202ENST00000373162 EIF5P55010 431 aaKnown RBP23.99■■□□□ 1.43
TRAPPC3-202ENST00000373162 GRIN3BO60391 1043 aa23.98■■□□□ 1.43
TRAPPC3-202ENST00000373162 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
TRAPPC3-202ENST00000373162 MCM10Q7L590 875 aa23.98■■□□□ 1.43
TRAPPC3-202ENST00000373162 NARFQ9UHQ1 456 aa23.98■■□□□ 1.43
TRAPPC3-202ENST00000373162 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
TRAPPC3-202ENST00000373162 POLRMTO00411 1230 aaKnown RBP23.96■■□□□ 1.43
TRAPPC3-202ENST00000373162 DCTN1Q14203 1278 aa23.96■■□□□ 1.43
TRAPPC3-202ENST00000373162 USPL1Q5W0Q7 1092 aa23.96■■□□□ 1.43
TRAPPC3-202ENST00000373162 FMNL2Q96PY5 1086 aa23.96■■□□□ 1.43
TRAPPC3-202ENST00000373162 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
TRAPPC3-202ENST00000373162 ADCY9O60503 1353 aa23.95■■□□□ 1.42
TRAPPC3-202ENST00000373162 BTBD11A6QL63 1104 aa23.95■■□□□ 1.42
TRAPPC3-202ENST00000373162 TGFB2P61812 414 aa23.95■■□□□ 1.42
TRAPPC3-202ENST00000373162 TEX13AQ9BXU3 409 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC3-202ENST00000373162 LAMB4A4D0S4 1761 aa23.94■■□□□ 1.42
TRAPPC3-202ENST00000373162 STARD3NLO95772 234 aa23.94■■□□□ 1.42
TRAPPC3-202ENST00000373162 KCNA3P22001 575 aa23.94■■□□□ 1.42
TRAPPC3-202ENST00000373162 PARP3Q9Y6F1 533 aa23.94■■□□□ 1.42
TRAPPC3-202ENST00000373162 MYBBP1AQ9BQG0 1328 aaKnown RBP23.92■■□□□ 1.42
TRAPPC3-202ENST00000373162 ARFGEF1Q9Y6D6 1849 aa23.92■■□□□ 1.42
TRAPPC3-202ENST00000373162 RTF1Q92541 710 aaKnown RBP23.92■■□□□ 1.42
TRAPPC3-202ENST00000373162 DLEC1Q9Y238 1755 aa23.91■■□□□ 1.42
TRAPPC3-202ENST00000373162 PRAMEF22A3QJZ6 481 aa23.91■■□□□ 1.42
TRAPPC3-202ENST00000373162 CANXP27824 592 aaKnown RBP23.91■■□□□ 1.42
TRAPPC3-202ENST00000373162 IL6STP40189 918 aaPredicted RBP23.91■■□□□ 1.42
TRAPPC3-202ENST00000373162 NFIXQ14938 502 aa23.91■■□□□ 1.42
TRAPPC3-202ENST00000373162 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
TRAPPC3-202ENST00000373162 ZPR1O75312 459 aa23.9■■□□□ 1.42
TRAPPC3-202ENST00000373162 USP16Q9Y5T5 823 aa23.9■■□□□ 1.42
TRAPPC3-202ENST00000373162 A0A0G2JLW4 131 aa23.89■■□□□ 1.41
TRAPPC3-202ENST00000373162 A1BGP04217 495 aa23.89■■□□□ 1.41
TRAPPC3-202ENST00000373162 DPEP1P16444 411 aa23.89■■□□□ 1.41
TRAPPC3-202ENST00000373162 TAF7Q15545 349 aaPredicted RBP23.88■■□□□ 1.41
TRAPPC3-202ENST00000373162 WWC3Q9ULE0 1092 aa23.87■■□□□ 1.41
TRAPPC3-202ENST00000373162 ANKRD31Q8N7Z5 1873 aa23.87■■□□□ 1.41
TRAPPC3-202ENST00000373162 A0A087WZG4 1122 aa23.86■■□□□ 1.41
TRAPPC3-202ENST00000373162 C1QTNF8P60827 252 aa23.86■■□□□ 1.41
TRAPPC3-202ENST00000373162 CAMTA2O94983 1202 aa23.85■■□□□ 1.41
TRAPPC3-202ENST00000373162 SNRPA1P09661 255 aaKnown RBP23.85■■□□□ 1.41
TRAPPC3-202ENST00000373162 CARMIL3Q8ND23 1372 aa23.85■■□□□ 1.41
TRAPPC3-202ENST00000373162 THUMPD2Q9BTF0 503 aaKnown RBP23.84■■□□□ 1.41
TRAPPC3-202ENST00000373162 PRKRIP1Q9H875 184 aaPredicted RBP23.84■■□□□ 1.41
TRAPPC3-202ENST00000373162 NBPF26B4DH59 902 aa23.83■■□□□ 1.41
TRAPPC3-202ENST00000373162 NBPF10Q6P3W6 841 aaKnown RBP23.83■■□□□ 1.41
TRAPPC3-202ENST00000373162 NBPF15Q8N660 670 aa23.83■■□□□ 1.41
TRAPPC3-202ENST00000373162 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
TRAPPC3-202ENST00000373162 CEP350Q5VT06 3117 aa23.83■■□□□ 1.4
TRAPPC3-202ENST00000373162 ATP10DQ9P241 1426 aa23.83■■□□□ 1.4
TRAPPC3-202ENST00000373162 SERPINB2P05120 415 aa23.82■■□□□ 1.4
TRAPPC3-202ENST00000373162 TBC1D9BQ66K14 1250 aa23.82■■□□□ 1.4
TRAPPC3-202ENST00000373162 MIS18AQ9NYP9 233 aa23.82■■□□□ 1.4
TRAPPC3-202ENST00000373162 PNISRQ8TF01 805 aaKnown RBP23.81■■□□□ 1.4
TRAPPC3-202ENST00000373162 TBC1D2BQ9UPU7 963 aa23.81■■□□□ 1.4
TRAPPC3-202ENST00000373162 COL11A2P13942 1736 aaPredicted RBP23.81■■□□□ 1.4
TRAPPC3-202ENST00000373162 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
TRAPPC3-202ENST00000373162 NEFMP07197 916 aa23.8■■□□□ 1.4
TRAPPC3-202ENST00000373162 CHRNA5P30532 468 aa23.8■■□□□ 1.4
TRAPPC3-202ENST00000373162 PIP4K2AP48426 406 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC3-202ENST00000373162 EIF4A1P60842 406 aaKnown RBP23.8■■□□□ 1.4
TRAPPC3-202ENST00000373162 BCS1LQ9Y276 419 aa23.79■■□□□ 1.4
TRAPPC3-202ENST00000373162 RGL2O15211 777 aa23.78■■□□□ 1.4
TRAPPC3-202ENST00000373162 GIGYF1O75420 1035 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC3-202ENST00000373162 TMPOP42166 694 aaKnown RBP23.78■■□□□ 1.4
TRAPPC3-202ENST00000373162 DZIP3Q86Y13 1208 aaKnown RBP23.77■■□□□ 1.4
TRAPPC3-202ENST00000373162 PIM2Q9P1W9 311 aa23.77■■□□□ 1.4
TRAPPC3-202ENST00000373162 SENP3-EIF4A1A0A087X0R7 540 aa23.75■■□□□ 1.39
TRAPPC3-202ENST00000373162 PRR5LQ6MZQ0 368 aa23.75■■□□□ 1.39
TRAPPC3-202ENST00000373162 RIPK4P57078 832 aa23.74■■□□□ 1.39
TRAPPC3-202ENST00000373162 CLEC4GQ6UXB4 293 aa23.74■■□□□ 1.39
TRAPPC3-202ENST00000373162 ZNF330Q9Y3S2 320 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC3-202ENST00000373162 SBF1O95248 1867 aa23.73■■□□□ 1.39
TRAPPC3-202ENST00000373162 BICDL1Q6ZP65 573 aa23.73■■□□□ 1.39
TRAPPC3-202ENST00000373162 BABAM1Q9NWV8 329 aa23.73■■□□□ 1.39
TRAPPC3-202ENST00000373162 ADAMTS8Q9UP79 889 aa23.73■■□□□ 1.39
TRAPPC3-202ENST00000373162 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC3-202ENST00000373162 DALRD3Q5D0E6 543 aaKnown RBP23.72■■□□□ 1.39
TRAPPC3-202ENST00000373162 TRIM35Q9UPQ4 493 aa23.72■■□□□ 1.39
TRAPPC3-202ENST00000373162 ARFGEF2Q9Y6D5 1785 aa23.71■■□□□ 1.39
TRAPPC3-202ENST00000373162 LRP10Q7Z4F1 713 aa23.71■■□□□ 1.39
TRAPPC3-202ENST00000373162 CCDC146Q8IYE0 955 aa23.71■■□□□ 1.39
TRAPPC3-202ENST00000373162 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
TRAPPC3-202ENST00000373162 BRIP1Q9BX63 1249 aa23.7■■□□□ 1.38
TRAPPC3-202ENST00000373162 NUP98P52948 1817 aa23.7■■□□□ 1.38
TRAPPC3-202ENST00000373162 LMOD3Q0VAK6 560 aa23.69■■□□□ 1.38
TRAPPC3-202ENST00000373162 ERBB4Q15303 1308 aa23.68■■□□□ 1.38
TRAPPC3-202ENST00000373162 ARHGAP27Q6ZUM4 889 aa23.68■■□□□ 1.38
TRAPPC3-202ENST00000373162 RRP7AQ9Y3A4 280 aaKnown RBP23.68■■□□□ 1.38
TRAPPC3-202ENST00000373162 C2CD5Q86YS7 1000 aa23.67■■□□□ 1.38
TRAPPC3-202ENST00000373162 SETDB2Q96T68 719 aa23.67■■□□□ 1.38
TRAPPC3-202ENST00000373162 TSPYL4Q9UJ04 414 aa23.67■■□□□ 1.38
TRAPPC3-202ENST00000373162 CHL1O00533 1208 aa23.66■■□□□ 1.38
TRAPPC3-202ENST00000373162 WDR43Q15061 677 aaKnown RBP eCLIP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms