RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 KDM3BQ7LBC6 1761 aa30.03■■■□□ 2.4
COL9A2-201ENST00000372736 UTRNP46939 3433 aa30.02■■■□□ 2.4
COL9A2-201ENST00000372736 STARD3NLO95772 234 aa30.01■■■□□ 2.39
COL9A2-201ENST00000372736 GOLGB1Q14789 3259 aaKnown RBP30.01■■■□□ 2.39
COL9A2-201ENST00000372736 TEX13AQ9BXU3 409 aaPredicted RBP30■■■□□ 2.39
COL9A2-201ENST00000372736 ZNF316A6NFI3 1004 aaPredicted RBP29.98■■■□□ 2.39
COL9A2-201ENST00000372736 KIAA1551Q9HCM1 1747 aa29.98■■■□□ 2.39
COL9A2-201ENST00000372736 C10orf71Q711Q0 1435 aa29.97■■■□□ 2.39
COL9A2-201ENST00000372736 FKBP8Q14318 412 aa29.97■■■□□ 2.39
COL9A2-201ENST00000372736 TAF7Q15545 349 aaPredicted RBP29.97■■■□□ 2.39
COL9A2-201ENST00000372736 THUMPD2Q9BTF0 503 aaKnown RBP29.97■■■□□ 2.39
COL9A2-201ENST00000372736 CANXP27824 592 aaKnown RBP29.96■■■□□ 2.39
COL9A2-201ENST00000372736 SCN7AQ01118 1682 aa29.95■■■□□ 2.39
COL9A2-201ENST00000372736 EIF5P55010 431 aaKnown RBP29.95■■■□□ 2.39
COL9A2-201ENST00000372736 WDR43Q15061 677 aaKnown RBP eCLIP29.95■■■□□ 2.39
COL9A2-201ENST00000372736 GPR162Q16538 588 aa29.95■■■□□ 2.39
COL9A2-201ENST00000372736 LAMB4A4D0S4 1761 aa29.95■■■□□ 2.38
COL9A2-201ENST00000372736 ZPR1O75312 459 aa29.94■■■□□ 2.38
COL9A2-201ENST00000372736 USPL1Q5W0Q7 1092 aa29.94■■■□□ 2.38
COL9A2-201ENST00000372736 NARFQ9UHQ1 456 aa29.94■■■□□ 2.38
COL9A2-201ENST00000372736 CHD4Q14839 1912 aa29.94■■■□□ 2.38
COL9A2-201ENST00000372736 PRAMEF22A3QJZ6 481 aa29.93■■■□□ 2.38
COL9A2-201ENST00000372736 CCDC146Q8IYE0 955 aa29.93■■■□□ 2.38
COL9A2-201ENST00000372736 MIS18AQ9NYP9 233 aa29.93■■■□□ 2.38
COL9A2-201ENST00000372736 TMPOP42166 694 aaKnown RBP29.92■■■□□ 2.38
COL9A2-201ENST00000372736 DDR1Q08345 913 aa29.92■■■□□ 2.38
COL9A2-201ENST00000372736 PELP1Q8IZL8 1130 aaKnown RBP29.92■■■□□ 2.38
COL9A2-201ENST00000372736 SNRPA1P09661 255 aaKnown RBP29.91■■■□□ 2.38
COL9A2-201ENST00000372736 YBX3P16989 372 aaKnown RBP eCLIP29.91■■■□□ 2.38
COL9A2-201ENST00000372736 RIPK4P57078 832 aa29.91■■■□□ 2.38
COL9A2-201ENST00000372736 ADAMTS8Q9UP79 889 aa29.91■■■□□ 2.38
COL9A2-201ENST00000372736 PARP3Q9Y6F1 533 aa29.91■■■□□ 2.38
COL9A2-201ENST00000372736 PXDNLA1KZ92 1463 aa29.91■■■□□ 2.38
COL9A2-201ENST00000372736 A1BGP04217 495 aa29.9■■■□□ 2.38
COL9A2-201ENST00000372736 YY1P25490 414 aa29.9■■■□□ 2.38
COL9A2-201ENST00000372736 PNISRQ8TF01 805 aaKnown RBP29.9■■■□□ 2.38
COL9A2-201ENST00000372736 BCL2L12Q9HB09 334 aa29.9■■■□□ 2.38
COL9A2-201ENST00000372736 USP16Q9Y5T5 823 aa29.9■■■□□ 2.38
COL9A2-201ENST00000372736 N4BP2Q86UW6 1770 aaPredicted RBP29.9■■■□□ 2.38
COL9A2-201ENST00000372736 IL6STP40189 918 aaPredicted RBP29.89■■■□□ 2.38
COL9A2-201ENST00000372736 RUNDC1Q96C34 613 aa29.89■■■□□ 2.38
COL9A2-201ENST00000372736 BCORQ6W2J9 1755 aa29.88■■■□□ 2.37
COL9A2-201ENST00000372736 TM4SF1P30408 202 aa29.88■■■□□ 2.37
COL9A2-201ENST00000372736 AFDNP55196 1824 aaKnown RBP29.87■■■□□ 2.37
COL9A2-201ENST00000372736 A0A087WZG4 1122 aa29.87■■■□□ 2.37
COL9A2-201ENST00000372736 RRP7AQ9Y3A4 280 aaKnown RBP29.87■■■□□ 2.37
COL9A2-201ENST00000372736 NRXN2Q9P2S2 1712 aa29.87■■■□□ 2.37
COL9A2-201ENST00000372736 POLRMTO00411 1230 aaKnown RBP29.86■■■□□ 2.37
COL9A2-201ENST00000372736 LMOD3Q0VAK6 560 aa29.86■■■□□ 2.37
COL9A2-201ENST00000372736 ZNF330Q9Y3S2 320 aaPredicted RBP29.85■■■□□ 2.37
COL9A2-201ENST00000372736 PIP4K2AP48426 406 aaPredicted RBP29.84■■■□□ 2.37
COL9A2-201ENST00000372736 NFIXQ14938 502 aa29.84■■■□□ 2.37
COL9A2-201ENST00000372736 BRCA1P38398 1863 aaKnown RBP29.84■■■□□ 2.37
COL9A2-201ENST00000372736 EIF4A1P60842 406 aaKnown RBP29.83■■■□□ 2.37
COL9A2-201ENST00000372736 TBC1D2BQ9UPU7 963 aa29.82■■■□□ 2.36
COL9A2-201ENST00000372736 GIGYF1O75420 1035 aaPredicted RBP29.81■■■□□ 2.36
COL9A2-201ENST00000372736 TGFB2P61812 414 aa29.81■■■□□ 2.36
COL9A2-201ENST00000372736 NEUROD2Q15784 382 aa29.81■■■□□ 2.36
COL9A2-201ENST00000372736 NBPF26B4DH59 902 aa29.8■■■□□ 2.36
COL9A2-201ENST00000372736 GRIN3BO60391 1043 aa29.8■■■□□ 2.36
COL9A2-201ENST00000372736 CCDC184Q52MB2 194 aa29.8■■■□□ 2.36
COL9A2-201ENST00000372736 NBPF10Q6P3W6 841 aaKnown RBP29.8■■■□□ 2.36
COL9A2-201ENST00000372736 NBPF15Q8N660 670 aa29.8■■■□□ 2.36
COL9A2-201ENST00000372736 WWC3Q9ULE0 1092 aa29.8■■■□□ 2.36
COL9A2-201ENST00000372736 TRIM35Q9UPQ4 493 aa29.8■■■□□ 2.36
COL9A2-201ENST00000372736 TSPYL4Q9UJ04 414 aa29.79■■■□□ 2.36
COL9A2-201ENST00000372736 CAMTA2O94983 1202 aa29.78■■■□□ 2.36
COL9A2-201ENST00000372736 A0A0G2JLW4 131 aa29.77■■■□□ 2.36
COL9A2-201ENST00000372736 NPM2Q86SE8 214 aaKnown RBP29.77■■■□□ 2.36
COL9A2-201ENST00000372736 BABAM1Q9NWV8 329 aa29.77■■■□□ 2.36
COL9A2-201ENST00000372736 DPEP1P16444 411 aa29.76■■■□□ 2.35
COL9A2-201ENST00000372736 TBC1D9BQ66K14 1250 aa29.76■■■□□ 2.35
COL9A2-201ENST00000372736 DZIP3Q86Y13 1208 aaKnown RBP29.76■■■□□ 2.35
COL9A2-201ENST00000372736 BICDL1Q6ZP65 573 aa29.74■■■□□ 2.35
COL9A2-201ENST00000372736 SERPINB2P05120 415 aa29.73■■■□□ 2.35
COL9A2-201ENST00000372736 KCNA3P22001 575 aa29.73■■■□□ 2.35
COL9A2-201ENST00000372736 ANP32CO43423 234 aa29.72■■■□□ 2.35
COL9A2-201ENST00000372736 CARMIL3Q8ND23 1372 aa29.72■■■□□ 2.35
COL9A2-201ENST00000372736 DLEC1Q9Y238 1755 aa29.72■■■□□ 2.35
COL9A2-201ENST00000372736 ANKRD31Q8N7Z5 1873 aa29.71■■■□□ 2.35
COL9A2-201ENST00000372736 ARFGEF1Q9Y6D6 1849 aa29.71■■■□□ 2.35
COL9A2-201ENST00000372736 APAF1O14727 1248 aa29.7■■■□□ 2.35
COL9A2-201ENST00000372736 CHL1O00533 1208 aa29.69■■■□□ 2.34
COL9A2-201ENST00000372736 CHRNA5P30532 468 aa29.68■■■□□ 2.34
COL9A2-201ENST00000372736 BCS1LQ9Y276 419 aa29.67■■■□□ 2.34
COL9A2-201ENST00000372736 RGL2O15211 777 aa29.66■■■□□ 2.34
COL9A2-201ENST00000372736 CLEC4GQ6UXB4 293 aa29.66■■■□□ 2.34
COL9A2-201ENST00000372736 ZNF784Q8NCA9 323 aaPredicted RBP29.66■■■□□ 2.34
COL9A2-201ENST00000372736 ERBB4Q15303 1308 aa29.66■■■□□ 2.34
COL9A2-201ENST00000372736 SETDB2Q96T68 719 aa29.65■■■□□ 2.34
COL9A2-201ENST00000372736 MRS2Q9HD23 443 aa29.65■■■□□ 2.34
COL9A2-201ENST00000372736 ZNF652Q9Y2D9 606 aa29.65■■■□□ 2.34
COL9A2-201ENST00000372736 PRR5LQ6MZQ0 368 aa29.64■■■□□ 2.34
COL9A2-201ENST00000372736 LAS1LQ9Y4W2 734 aaKnown RBP29.64■■■□□ 2.34
COL9A2-201ENST00000372736 COL11A2P13942 1736 aaPredicted RBP29.64■■■□□ 2.34
COL9A2-201ENST00000372736 PIM2Q9P1W9 311 aa29.63■■■□□ 2.33
COL9A2-201ENST00000372736 NUP98P52948 1817 aa29.63■■■□□ 2.33
COL9A2-201ENST00000372736 KRT24Q2M2I5 525 aa29.62■■■□□ 2.33
COL9A2-201ENST00000372736 CFAP44Q96MT7 982 aa29.62■■■□□ 2.33
COL9A2-201ENST00000372736 MYL6BP14649 208 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms