RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 VSIG10Q8N0Z9 540 aa20.49■□□□□ 0.87
C9orf78-201ENST00000372447 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
C9orf78-201ENST00000372447 SOCS7O14512 581 aa20.48■□□□□ 0.87
C9orf78-201ENST00000372447 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
C9orf78-201ENST00000372447 SNRPA1P09661 255 aaKnown RBP20.46■□□□□ 0.87
C9orf78-201ENST00000372447 DNAJC10Q8IXB1 793 aa20.46■□□□□ 0.87
C9orf78-201ENST00000372447 RGPD3A6NKT7 1758 aaPredicted RBP20.46■□□□□ 0.87
C9orf78-201ENST00000372447 RGPD4Q7Z3J3 1758 aa20.46■□□□□ 0.87
C9orf78-201ENST00000372447 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
C9orf78-201ENST00000372447 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
C9orf78-201ENST00000372447 C8orf58Q8NAV2 365 aa20.45■□□□□ 0.86
C9orf78-201ENST00000372447 USP16Q9Y5T5 823 aa20.45■□□□□ 0.86
C9orf78-201ENST00000372447 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
C9orf78-201ENST00000372447 ELL2O00472 640 aaPredicted RBP20.44■□□□□ 0.86
C9orf78-201ENST00000372447 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
C9orf78-201ENST00000372447 TSPYL6Q8N831 410 aa20.44■□□□□ 0.86
C9orf78-201ENST00000372447 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
C9orf78-201ENST00000372447 CENPQQ7L2Z9 268 aaPredicted RBP20.43■□□□□ 0.86
C9orf78-201ENST00000372447 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
C9orf78-201ENST00000372447 CYP19A1P11511 503 aaPredicted RBP20.42■□□□□ 0.86
C9orf78-201ENST00000372447 PANK1Q8TE04 598 aa20.42■□□□□ 0.86
C9orf78-201ENST00000372447 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
C9orf78-201ENST00000372447 ZNF831Q5JPB2 1677 aa20.42■□□□□ 0.86
C9orf78-201ENST00000372447 TJP1Q07157 1748 aa20.4■□□□□ 0.86
C9orf78-201ENST00000372447 STARD3NLO95772 234 aa20.4■□□□□ 0.86
C9orf78-201ENST00000372447 COG6Q9Y2V7 657 aa20.4■□□□□ 0.86
C9orf78-201ENST00000372447 RREB1Q92766 1687 aa20.39■□□□□ 0.86
C9orf78-201ENST00000372447 EIF2S2P20042 333 aaKnown RBP20.39■□□□□ 0.86
C9orf78-201ENST00000372447 CRKLP46109 303 aaKnown RBP20.39■□□□□ 0.86
C9orf78-201ENST00000372447 HOXB7P09629 217 aa20.39■□□□□ 0.85
C9orf78-201ENST00000372447 TWISTNBQ3B726 338 aaPredicted RBP20.39■□□□□ 0.85
C9orf78-201ENST00000372447 ANO8Q9HCE9 1232 aaPredicted RBP20.39■□□□□ 0.85
C9orf78-201ENST00000372447 CICQ96RK0 1608 aaPredicted RBP20.39■□□□□ 0.85
C9orf78-201ENST00000372447 A1BGP04217 495 aa20.38■□□□□ 0.85
C9orf78-201ENST00000372447 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
C9orf78-201ENST00000372447 INTS5Q6P9B9 1019 aaKnown RBP20.38■□□□□ 0.85
C9orf78-201ENST00000372447 AKT1S1Q96B36 256 aa20.38■□□□□ 0.85
C9orf78-201ENST00000372447 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
C9orf78-201ENST00000372447 C5P01031 1676 aa20.37■□□□□ 0.85
C9orf78-201ENST00000372447 VAMP4O75379 141 aa20.37■□□□□ 0.85
C9orf78-201ENST00000372447 HMGB2P26583 209 aaKnown RBP20.37■□□□□ 0.85
C9orf78-201ENST00000372447 RC3H1Q5TC82 1133 aaKnown RBP20.37■□□□□ 0.85
C9orf78-201ENST00000372447 NECTIN2Q92692 538 aa20.37■□□□□ 0.85
C9orf78-201ENST00000372447 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
C9orf78-201ENST00000372447 CNTNAP4Q9C0A0 1308 aa20.37■□□□□ 0.85
C9orf78-201ENST00000372447 MS4A1P11836 297 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 AAMPQ13685 434 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 ZKSCAN2Q63HK3 967 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 CLUAP1Q96AJ1 413 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 CCDC87Q9NVE4 849 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
C9orf78-201ENST00000372447 NUP188Q5SRE5 1749 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 RLBP1P12271 317 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 PIP4K2AP48426 406 aaPredicted RBP20.36■□□□□ 0.85
C9orf78-201ENST00000372447 SSH1Q8WYL5 1049 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 ZBTB1Q9Y2K1 713 aa20.36■□□□□ 0.85
C9orf78-201ENST00000372447 C4BP0C0L5 1744 aa20.35■□□□□ 0.85
C9orf78-201ENST00000372447 HDGFL1Q5TGJ6 251 aa20.35■□□□□ 0.85
C9orf78-201ENST00000372447 AK7Q96M32 723 aa20.35■□□□□ 0.85
C9orf78-201ENST00000372447 TNNQ9UQP3 1299 aa20.35■□□□□ 0.85
C9orf78-201ENST00000372447 SOS1Q07889 1333 aaPredicted RBP20.35■□□□□ 0.85
C9orf78-201ENST00000372447 MYH14Q7Z406 1995 aaKnown RBP20.34■□□□□ 0.85
C9orf78-201ENST00000372447 SLC15A2Q16348 729 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 AMIGO3Q86WK7 504 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 GNPATO15228 680 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 NBPF14Q5TI25 921 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
C9orf78-201ENST00000372447 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 STK32BQ9NY57 414 aa20.34■□□□□ 0.85
C9orf78-201ENST00000372447 PDIA6Q15084 440 aa20.33■□□□□ 0.84
C9orf78-201ENST00000372447 ALDH1L2Q3SY69 923 aa20.33■□□□□ 0.84
C9orf78-201ENST00000372447 ZNF428Q96B54 188 aa20.33■□□□□ 0.84
C9orf78-201ENST00000372447 TFCP2L1Q9NZI6 479 aa20.33■□□□□ 0.84
C9orf78-201ENST00000372447 RPS6KA4O75676 772 aa20.32■□□□□ 0.84
C9orf78-201ENST00000372447 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
C9orf78-201ENST00000372447 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
C9orf78-201ENST00000372447 RTCBQ9Y3I0 505 aaKnown RBP20.31■□□□□ 0.84
C9orf78-201ENST00000372447 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
C9orf78-201ENST00000372447 ANXA1P04083 346 aa20.31■□□□□ 0.84
C9orf78-201ENST00000372447 PROSER3Q2NL68 480 aa20.31■□□□□ 0.84
C9orf78-201ENST00000372447 CCDC30Q5VVM6 783 aa20.31■□□□□ 0.84
C9orf78-201ENST00000372447 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
C9orf78-201ENST00000372447 MYL6BP14649 208 aa20.3■□□□□ 0.84
C9orf78-201ENST00000372447 MVPQ14764 893 aaKnown RBP20.3■□□□□ 0.84
C9orf78-201ENST00000372447 ERBB4Q15303 1308 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 PHF14O94880 888 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 IL6STP40189 918 aaPredicted RBP20.29■□□□□ 0.84
C9orf78-201ENST00000372447 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
C9orf78-201ENST00000372447 ATF7IPQ6VMQ6 1270 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 SKAP1Q86WV1 359 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 CHMP4AQ9BY43 222 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
C9orf78-201ENST00000372447 DBF4Q9UBU7 674 aaPredicted RBP20.29■□□□□ 0.84
C9orf78-201ENST00000372447 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
C9orf78-201ENST00000372447 ZNF330Q9Y3S2 320 aaPredicted RBP20.29■□□□□ 0.84
C9orf78-201ENST00000372447 KIF16BQ96L93 1317 aa20.29■□□□□ 0.84
C9orf78-201ENST00000372447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.29■□□□□ 0.84
C9orf78-201ENST00000372447 IGHDP01880 384 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms