RNA–Protein interactions for RNA: ENST00000372277.7

TMEM254-204, Transcript of transmembrane protein 254, humanhuman

TSL 5 BASIC

Gene TMEM254, Length 366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-204ENST00000372277 COL15A1P39059 1388 aa19.38■□□□□ 0.69
TMEM254-204ENST00000372277 N4BP2Q86UW6 1770 aaPredicted RBP19.38■□□□□ 0.69
TMEM254-204ENST00000372277 ZNF526Q8TF50 670 aaPredicted RBP19.38■□□□□ 0.69
TMEM254-204ENST00000372277 DALRD3Q5D0E6 543 aaKnown RBP19.37■□□□□ 0.69
TMEM254-204ENST00000372277 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
TMEM254-204ENST00000372277 ZBTB1Q9Y2K1 713 aa19.37■□□□□ 0.69
TMEM254-204ENST00000372277 A0A087WZG4 1122 aa19.36■□□□□ 0.69
TMEM254-204ENST00000372277 ZNF790Q6PG37 636 aa19.36■□□□□ 0.69
TMEM254-204ENST00000372277 IL17REQ8NFR9 667 aa19.36■□□□□ 0.69
TMEM254-204ENST00000372277 CEP350Q5VT06 3117 aa19.36■□□□□ 0.69
TMEM254-204ENST00000372277 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
TMEM254-204ENST00000372277 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
TMEM254-204ENST00000372277 CNGB1Q14028 1251 aaPredicted RBP19.34■□□□□ 0.69
TMEM254-204ENST00000372277 NFIXQ14938 502 aa19.34■□□□□ 0.69
TMEM254-204ENST00000372277 CEMIPQ8WUJ3 1361 aa19.33■□□□□ 0.69
TMEM254-204ENST00000372277 HEG1Q9ULI3 1381 aa19.33■□□□□ 0.69
TMEM254-204ENST00000372277 BRCA1P38398 1863 aaKnown RBP19.33■□□□□ 0.69
TMEM254-204ENST00000372277 ZNF496Q96IT1 587 aaPredicted RBP19.33■□□□□ 0.68
TMEM254-204ENST00000372277 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
TMEM254-204ENST00000372277 KIF3CO14782 793 aa19.32■□□□□ 0.68
TMEM254-204ENST00000372277 HSPA6P17066 643 aa19.32■□□□□ 0.68
TMEM254-204ENST00000372277 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
TMEM254-204ENST00000372277 PRKAR2BP31323 418 aa19.32■□□□□ 0.68
TMEM254-204ENST00000372277 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
TMEM254-204ENST00000372277 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
TMEM254-204ENST00000372277 ARFGEF1Q9Y6D6 1849 aa19.32■□□□□ 0.68
TMEM254-204ENST00000372277 CHRNA5P30532 468 aa19.31■□□□□ 0.68
TMEM254-204ENST00000372277 BCL2L12Q9HB09 334 aa19.31■□□□□ 0.68
TMEM254-204ENST00000372277 SERPINB2P05120 415 aa19.3■□□□□ 0.68
TMEM254-204ENST00000372277 PPP2R1AP30153 589 aa19.3■□□□□ 0.68
TMEM254-204ENST00000372277 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
TMEM254-204ENST00000372277 C9orf131Q5VYM1 1079 aa19.3■□□□□ 0.68
TMEM254-204ENST00000372277 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
TMEM254-204ENST00000372277 PHACTR3Q96KR7 559 aa19.3■□□□□ 0.68
TMEM254-204ENST00000372277 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
TMEM254-204ENST00000372277 BTBD11A6QL63 1104 aa19.28■□□□□ 0.68
TMEM254-204ENST00000372277 TOMM70O94826 608 aa19.28■□□□□ 0.68
TMEM254-204ENST00000372277 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
TMEM254-204ENST00000372277 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
TMEM254-204ENST00000372277 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
TMEM254-204ENST00000372277 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
TMEM254-204ENST00000372277 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
TMEM254-204ENST00000372277 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.67
TMEM254-204ENST00000372277 KDM2BQ8NHM5 1336 aa19.26■□□□□ 0.67
TMEM254-204ENST00000372277 ZC3H4Q9UPT8 1303 aaKnown RBP19.26■□□□□ 0.67
TMEM254-204ENST00000372277 RNF181Q9P0P0 153 aa19.26■□□□□ 0.67
TMEM254-204ENST00000372277 H0YIN7 160 aa19.25■□□□□ 0.67
TMEM254-204ENST00000372277 TTLL6Q8N841 843 aa19.25■□□□□ 0.67
TMEM254-204ENST00000372277 CARMIL3Q8ND23 1372 aa19.24■□□□□ 0.67
TMEM254-204ENST00000372277 C2CD5Q86YS7 1000 aa19.24■□□□□ 0.67
TMEM254-204ENST00000372277 PDE6BP35913 854 aa19.23■□□□□ 0.67
TMEM254-204ENST00000372277 BICDL1Q6ZP65 573 aa19.23■□□□□ 0.67
TMEM254-204ENST00000372277 BRIP1Q9BX63 1249 aa19.23■□□□□ 0.67
TMEM254-204ENST00000372277 NMRK2Q9NPI5 230 aa19.23■□□□□ 0.67
TMEM254-204ENST00000372277 TBC1D2BQ9UPU7 963 aa19.23■□□□□ 0.67
TMEM254-204ENST00000372277 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
TMEM254-204ENST00000372277 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
TMEM254-204ENST00000372277 A1BGP04217 495 aa19.22■□□□□ 0.67
TMEM254-204ENST00000372277 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
TMEM254-204ENST00000372277 APLP1P51693 650 aa19.22■□□□□ 0.67
TMEM254-204ENST00000372277 TBC1D9BQ66K14 1250 aa19.22■□□□□ 0.67
TMEM254-204ENST00000372277 RBM46Q8TBY0 533 aaKnown RBP19.22■□□□□ 0.67
TMEM254-204ENST00000372277 RGL2O15211 777 aa19.21■□□□□ 0.67
TMEM254-204ENST00000372277 NEFMP07197 916 aa19.21■□□□□ 0.67
TMEM254-204ENST00000372277 LMNB1P20700 586 aa19.21■□□□□ 0.67
TMEM254-204ENST00000372277 C16orf71Q8IYS4 520 aaPredicted RBP19.21■□□□□ 0.67
TMEM254-204ENST00000372277 SETDB2Q96T68 719 aa19.21■□□□□ 0.67
TMEM254-204ENST00000372277 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
TMEM254-204ENST00000372277 KCNQ3O43525 872 aa19.2■□□□□ 0.66
TMEM254-204ENST00000372277 CLEC4GQ6UXB4 293 aa19.2■□□□□ 0.66
TMEM254-204ENST00000372277 MCM10Q7L590 875 aa19.2■□□□□ 0.66
TMEM254-204ENST00000372277 DZIP3Q86Y13 1208 aaKnown RBP19.2■□□□□ 0.66
TMEM254-204ENST00000372277 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
TMEM254-204ENST00000372277 CAMTA2O94983 1202 aa19.19■□□□□ 0.66
TMEM254-204ENST00000372277 PRR5LQ6MZQ0 368 aa19.19■□□□□ 0.66
TMEM254-204ENST00000372277 USP16Q9Y5T5 823 aa19.19■□□□□ 0.66
TMEM254-204ENST00000372277 FSTL1Q12841 308 aa19.18■□□□□ 0.66
TMEM254-204ENST00000372277 TAF7Q15545 349 aaPredicted RBP19.18■□□□□ 0.66
TMEM254-204ENST00000372277 CNBD1Q8NA66 436 aa19.18■□□□□ 0.66
TMEM254-204ENST00000372277 ZNF652Q9Y2D9 606 aa19.18■□□□□ 0.66
TMEM254-204ENST00000372277 NPHP1O15259 732 aa19.16■□□□□ 0.66
TMEM254-204ENST00000372277 ST5P78524 1137 aa19.16■□□□□ 0.66
TMEM254-204ENST00000372277 RASSF7Q02833 373 aa19.16■□□□□ 0.66
TMEM254-204ENST00000372277 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
TMEM254-204ENST00000372277 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
TMEM254-204ENST00000372277 CNKSR1Q969H4 720 aa19.15■□□□□ 0.66
TMEM254-204ENST00000372277 ZNF622Q969S3 477 aaKnown RBP eCLIP19.15■□□□□ 0.66
TMEM254-204ENST00000372277 SBF1O95248 1867 aa19.15■□□□□ 0.66
TMEM254-204ENST00000372277 DCTN1Q14203 1278 aa19.14■□□□□ 0.65
TMEM254-204ENST00000372277 STYK1Q6J9G0 422 aa19.14■□□□□ 0.65
TMEM254-204ENST00000372277 RRAGCQ9HB90 399 aa19.14■□□□□ 0.65
TMEM254-204ENST00000372277 GLTPD2A6NH11 291 aa19.13■□□□□ 0.65
TMEM254-204ENST00000372277 NFKBIEO00221 500 aa19.13■□□□□ 0.65
TMEM254-204ENST00000372277 SOGA3Q5TF21 947 aa19.13■□□□□ 0.65
TMEM254-204ENST00000372277 TNRC6CQ9HCJ0 1690 aaKnown RBP19.13■□□□□ 0.65
TMEM254-204ENST00000372277 LTBP3Q9NS15 1303 aa19.12■□□□□ 0.65
TMEM254-204ENST00000372277 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
TMEM254-204ENST00000372277 SRGNP10124 158 aa19.12■□□□□ 0.65
TMEM254-204ENST00000372277 NBPF5PQ86XG9 351 aaPredicted RBP19.12■□□□□ 0.65
TMEM254-204ENST00000372277 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms