RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 STARD3NLO95772 234 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 FBLN1P23142 703 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 KIF4BQ2VIQ3 1234 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 FSIP1Q8NA03 581 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 AKAP2Q9Y2D5 859 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 ZRSR2Q15696 482 aaKnown RBP27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 LARP1Q6PKG0 1096 aaKnown RBP27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 LIMCH1Q9UPQ0 1083 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 CCDC178Q5BJE1 867 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 ANKLE2Q86XL3 938 aa27.84■■■□□ 2.05
RAPGEF1-203ENST00000372195 NUP88Q99567 741 aaPredicted RBP27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 PODXL2Q9NZ53 605 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 SLC12A7Q9Y666 1083 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 RPGRIP1LQ68CZ1 1315 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 PCF11O94913 1555 aaKnown RBP27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 ZNF213O14771 459 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 CHMP4BP1P59074 171 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 JAKMIP3Q5VZ66 844 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 GOPCQ9HD26 462 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 ADCY5O95622 1261 aa27.83■■■□□ 2.05
RAPGEF1-203ENST00000372195 GBP2P32456 591 aaPredicted RBP27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 LRPPRCP42704 1394 aaKnown RBP27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 HAND2P61296 217 aa27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 TMC6Q7Z403 805 aa27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 KIF5CO60282 957 aa27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 CNNM3Q8NE01 707 aa27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 BCCIPQ9P287 314 aaKnown RBP eCLIP27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 SSRP1Q08945 709 aaKnown RBP27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 TMOD3Q9NYL9 352 aa27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 DNAAF4Q8WXU2 420 aa27.82■■■□□ 2.04
RAPGEF1-203ENST00000372195 CRACR2AQ9BSW2 395 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 MAP3K2Q9Y2U5 619 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 GOLGA6L7A0A1B0GV03 622 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 SCAND2PQ9GZW5 306 aaPredicted RBP27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 CACNA2D4Q7Z3S7 1137 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 GPTP24298 496 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 ANKRD18AQ8IVF6 992 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 KIF18AQ8NI77 898 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 ZNF830Q96NB3 372 aaPredicted RBP27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 ANKIB1Q9P2G1 1089 aa27.81■■■□□ 2.04
RAPGEF1-203ENST00000372195 GOLGA8AA7E2F4 631 aa27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 ZSCAN12O43309 604 aa27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 SH2B1Q9NRF2 756 aaPredicted RBP27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 SNRKQ9NRH2 765 aa27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 PRXQ9BXM0 1461 aa27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 TRMT1LQ7Z2T5 733 aaKnown RBP27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 ADGRF5Q8IZF2 1346 aa27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 GOLIM4O00461 696 aa27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 PTPN23Q9H3S7 1636 aa27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 ZFP91Q96JP5 570 aaPredicted RBP27.8■■■□□ 2.04
RAPGEF1-203ENST00000372195 TOP2BQ02880 1626 aa27.79■■■□□ 2.04
RAPGEF1-203ENST00000372195 CAVIN4Q5BKX8 364 aa27.79■■■□□ 2.04
RAPGEF1-203ENST00000372195 IFIT3O14879 490 aaKnown RBP27.79■■■□□ 2.04
RAPGEF1-203ENST00000372195 FKBP15Q5T1M5 1219 aa27.78■■■□□ 2.04
RAPGEF1-203ENST00000372195 ZHX1Q9UKY1 873 aaPredicted RBP27.78■■■□□ 2.04
RAPGEF1-203ENST00000372195 ATP5J2-PTCD1G3V325 749 aa27.78■■■□□ 2.04
RAPGEF1-203ENST00000372195 IFIT5Q13325 482 aaKnown RBP27.78■■■□□ 2.04
RAPGEF1-203ENST00000372195 ZBTB3Q9H5J0 574 aa27.78■■■□□ 2.04
RAPGEF1-203ENST00000372195 PPP4R3BQ5MIZ7 849 aa27.77■■■□□ 2.04
RAPGEF1-203ENST00000372195 CAMSAP2Q08AD1 1489 aa27.77■■■□□ 2.04
RAPGEF1-203ENST00000372195 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
RAPGEF1-203ENST00000372195 NLRP5P59047 1200 aa27.77■■■□□ 2.04
RAPGEF1-203ENST00000372195 DZIP1Q86YF9 867 aaKnown RBP27.77■■■□□ 2.04
RAPGEF1-203ENST00000372195 NCAPD3P42695 1498 aa27.77■■■□□ 2.04
RAPGEF1-203ENST00000372195 STX6O43752 255 aa27.76■■■□□ 2.04
RAPGEF1-203ENST00000372195 CRACR2BQ8N4Y2 399 aaPredicted RBP27.76■■■□□ 2.04
RAPGEF1-203ENST00000372195 TRMT112Q9UI30 125 aaKnown RBP27.76■■■□□ 2.04
RAPGEF1-203ENST00000372195 BAG4O95429 457 aaKnown RBP27.76■■■□□ 2.03
RAPGEF1-203ENST00000372195 FLIIQ13045 1269 aa27.76■■■□□ 2.03
RAPGEF1-203ENST00000372195 CCDC96Q2M329 555 aa27.76■■■□□ 2.03
RAPGEF1-203ENST00000372195 DYDC1Q8WWB3 177 aa27.76■■■□□ 2.03
RAPGEF1-203ENST00000372195 A0A087WZG4 1122 aa27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 MBIPQ9NS73 344 aa27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 ZNF219Q9P2Y4 722 aaPredicted RBP27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 ANXA1P04083 346 aa27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 TSG101Q99816 390 aa27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 NECAB1Q8N987 351 aa27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 LIG1P18858 919 aa27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 GIMAP6Q6P9H5 292 aa27.75■■■□□ 2.03
RAPGEF1-203ENST00000372195 ZSCAN23Q3MJ62 389 aa27.74■■■□□ 2.03
RAPGEF1-203ENST00000372195 DISP3Q9P2K9 1392 aa27.74■■■□□ 2.03
RAPGEF1-203ENST00000372195 NEBLO76041 1014 aa27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 VAT1LQ9HCJ6 419 aa27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 MAP3K12Q12852 859 aa27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 TDRD12Q587J7 1177 aaKnown RBP27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 KCNH5Q8NCM2 988 aa27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 CTCFLQ8NI51 663 aaPredicted RBP27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 ZSWIM4Q9H7M6 989 aa27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 CGNQ9P2M7 1197 aaKnown RBP27.73■■■□□ 2.03
RAPGEF1-203ENST00000372195 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 CTNNBL1Q8WYA6 563 aaPredicted RBP27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 ZBTB9Q96C00 473 aa27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 PLEKHH1Q9ULM0 1364 aa27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 LRRC2Q9BYS8 371 aa27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 MAP2K1Q02750 393 aaPredicted RBP27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 HSP90AA4PQ58FG1 418 aa27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 ZNF444Q8N0Y2 327 aaPredicted RBP27.72■■■□□ 2.03
RAPGEF1-203ENST00000372195 EVI5LQ96CN4 794 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms