RNA–Protein interactions for RNA: ENST00000371569.6

UBE2A-203, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 1 (best)

Gene UBE2A, Length 2,643 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-203ENST00000371569 TRIM22Q8IYM9 498 aa2.83□□□□□ -1.96
UBE2A-203ENST00000371569 ITPKCQ96DU7 683 aa2.83□□□□□ -1.96
UBE2A-203ENST00000371569 TRERF1Q96PN7 1200 aa2.83□□□□□ -1.96
UBE2A-203ENST00000371569 HMX1Q9NP08 348 aaPredicted RBP2.83□□□□□ -1.96
UBE2A-203ENST00000371569 CFAP43Q8NDM7 1665 aa2.83□□□□□ -1.96
UBE2A-203ENST00000371569 OIP5O43482 229 aa2.83□□□□□ -1.96
UBE2A-203ENST00000371569 MCCD1P59942 119 aaPredicted RBP2.83□□□□□ -1.96
UBE2A-203ENST00000371569 ZMYM1Q5SVZ6 1142 aa2.83□□□□□ -1.96
UBE2A-203ENST00000371569 ARTNQ5T4W7 220 aa2.83□□□□□ -1.96
UBE2A-203ENST00000371569 KANK4Q5T7N3 995 aaPredicted RBP2.83□□□□□ -1.96
UBE2A-203ENST00000371569 PUS7Q96PZ0 661 aaKnown RBP2.83□□□□□ -1.96
UBE2A-203ENST00000371569 ZC3H4Q9UPT8 1303 aaKnown RBP2.82□□□□□ -1.96
UBE2A-203ENST00000371569 HSP90B1P14625 803 aaKnown RBP2.82□□□□□ -1.96
UBE2A-203ENST00000371569 GRM5P41594 1212 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 NR1H3Q13133 447 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 CCDC116Q8IYX3 515 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 GDF2Q9UK05 429 aaPredicted RBP2.82□□□□□ -1.96
UBE2A-203ENST00000371569 PCDHGC3Q9UN70 934 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 HMGXB3Q12766 1538 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 UNCXA6NJT0 531 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 FAM196BA6NMK8 535 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 VAMP1P23763 118 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 DNAJC14Q6Y2X3 702 aaPredicted RBP2.82□□□□□ -1.96
UBE2A-203ENST00000371569 TBC1D9Q6ZT07 1266 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 CFHR5Q9BXR6 569 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 ZFP64Q9NPA5 681 aa2.82□□□□□ -1.96
UBE2A-203ENST00000371569 IGF1RP08069 1367 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 KRBA1A5PL33 1030 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 CANXP27824 592 aaKnown RBP2.81□□□□□ -1.96
UBE2A-203ENST00000371569 SSFA2P28290 1259 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 LINC01559Q495D7 138 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 NBPF14Q5TI25 921 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 C1orf216Q8TAB5 229 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 LRRN4Q8WUT4 740 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 CLP1Q92989 425 aaKnown RBP2.81□□□□□ -1.96
UBE2A-203ENST00000371569 CDCA7Q9BWT1 371 aaPredicted RBP2.81□□□□□ -1.96
UBE2A-203ENST00000371569 CDK12Q9NYV4 1490 aaPredicted RBP2.81□□□□□ -1.96
UBE2A-203ENST00000371569 STRCQ7RTU9 1775 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 CDC14CA4D256 554 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 CFAP99D6REC4 459 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 LBRQ14739 615 aaKnown RBP2.81□□□□□ -1.96
UBE2A-203ENST00000371569 WDR44Q5JSH3 913 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 C8orf37Q96NL8 207 aa2.81□□□□□ -1.96
UBE2A-203ENST00000371569 NOVA2Q9UNW9 492 aaKnown RBP2.81□□□□□ -1.96
UBE2A-203ENST00000371569 BAZ1BQ9UIG0 1483 aaKnown RBP2.8□□□□□ -1.96
UBE2A-203ENST00000371569 SOWAHDA6NJG2 315 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 FURINP09958 794 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 GPC1P35052 558 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 GAS6Q14393 721 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 TMEM164Q5U3C3 297 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 PHLDB3Q6NSJ2 640 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 SH3RF1Q7Z6J0 888 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 NBPF11Q86T75 865 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 USP35Q9P2H5 1018 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 ZMIZ1Q9ULJ6 1067 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 PHF24Q9UPV7 400 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 PPRC1Q5VV67 1664 aaKnown RBP2.8□□□□□ -1.96
UBE2A-203ENST00000371569 CARNS1A5YM72 827 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 ZBBXA8MT70 800 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 ATP5J2-PTCD1G3V325 749 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 C6orf229H3BNL8 230 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 PAX4O43316 350 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 COL19A1Q14993 1142 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 SWI5Q1ZZU3 235 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 CDCA8Q53HL2 280 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 RNF135Q8IUD6 432 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 GPSM3Q9Y4H4 160 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 KIAA1210Q9ULL0 1709 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 SYNJ1O43426 1573 aa2.8□□□□□ -1.96
UBE2A-203ENST00000371569 YEATS2Q9ULM3 1422 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L3A6NCW0 530 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L4A6NCW7 530 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 GNB5O14775 395 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 NR3C2P08235 984 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 NR6A1Q15406 480 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 ZNF326Q5BKZ1 582 aaKnown RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 LARP1Q6PKG0 1096 aaKnown RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L2Q6R6M4 530 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L1Q7RTZ2 530 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 ACDQ96AP0 544 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 MRRFQ96E11 262 aaKnown RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 BCL11AQ9H165 835 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 EGFL7Q9UHF1 273 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 ZNF16P17020 682 aaPredicted RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 RNF144AP50876 292 aaPredicted RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 ARID5BQ14865 1188 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 VASH1Q7L8A9 365 aaPredicted RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 GOLGA6L1Q8N7Z2 621 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 FAM200AQ8TCP9 573 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 EPS8L1Q8TE68 723 aa2.79□□□□□ -1.96
UBE2A-203ENST00000371569 KIAA1522Q9P206 1035 aaPredicted RBP2.79□□□□□ -1.96
UBE2A-203ENST00000371569 AATKQ6ZMQ8 1374 aa2.78□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L15C9J2P7 530 aa2.78□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L10C9JJH3 530 aa2.78□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L13C9JLJ4 530 aa2.78□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L12C9JPN9 530 aa2.78□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L11C9JVI0 530 aa2.78□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L21D6R901 530 aa2.78□□□□□ -1.96
UBE2A-203ENST00000371569 USP17L18D6R9N7 530 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms