RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 CANXP27824 592 aaKnown RBP22.78■■□□□ 1.24
LRRC42-202ENST00000371368 TM4SF1P30408 202 aa22.78■■□□□ 1.24
LRRC42-202ENST00000371368 C10orf71Q711Q0 1435 aa22.78■■□□□ 1.24
LRRC42-202ENST00000371368 NARFQ9UHQ1 456 aa22.78■■□□□ 1.24
LRRC42-202ENST00000371368 DDR1Q08345 913 aa22.77■■□□□ 1.24
LRRC42-202ENST00000371368 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
LRRC42-202ENST00000371368 PXDNLA1KZ92 1463 aa22.77■■□□□ 1.24
LRRC42-202ENST00000371368 COL15A1P39059 1388 aa22.76■■□□□ 1.23
LRRC42-202ENST00000371368 KCNQ3O43525 872 aa22.76■■□□□ 1.23
LRRC42-202ENST00000371368 MCM10Q7L590 875 aa22.76■■□□□ 1.23
LRRC42-202ENST00000371368 HTATSF1O43719 755 aaKnown RBP22.75■■□□□ 1.23
LRRC42-202ENST00000371368 DPEP1P16444 411 aa22.75■■□□□ 1.23
LRRC42-202ENST00000371368 GOLGB1Q14789 3259 aaKnown RBP22.74■■□□□ 1.23
LRRC42-202ENST00000371368 KIAA1551Q9HCM1 1747 aa22.74■■□□□ 1.23
LRRC42-202ENST00000371368 N4BP2Q86UW6 1770 aaPredicted RBP22.74■■□□□ 1.23
LRRC42-202ENST00000371368 DCTN1Q14203 1278 aa22.74■■□□□ 1.23
LRRC42-202ENST00000371368 A0A087WZG4 1122 aa22.73■■□□□ 1.23
LRRC42-202ENST00000371368 POLRMTO00411 1230 aaKnown RBP22.73■■□□□ 1.23
LRRC42-202ENST00000371368 EIF5P55010 431 aaKnown RBP22.73■■□□□ 1.23
LRRC42-202ENST00000371368 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
LRRC42-202ENST00000371368 BCL2L12Q9HB09 334 aa22.73■■□□□ 1.23
LRRC42-202ENST00000371368 NEFMP07197 916 aa22.72■■□□□ 1.23
LRRC42-202ENST00000371368 BCS1LQ9Y276 419 aa22.72■■□□□ 1.23
LRRC42-202ENST00000371368 KCNA3P22001 575 aa22.71■■□□□ 1.23
LRRC42-202ENST00000371368 NFIXQ14938 502 aa22.71■■□□□ 1.23
LRRC42-202ENST00000371368 RALBP1Q15311 655 aa22.71■■□□□ 1.23
LRRC42-202ENST00000371368 A1BGP04217 495 aa22.7■■□□□ 1.22
LRRC42-202ENST00000371368 PLEKHF1Q96S99 279 aa22.7■■□□□ 1.22
LRRC42-202ENST00000371368 IL6STP40189 918 aaPredicted RBP22.69■■□□□ 1.22
LRRC42-202ENST00000371368 TAF7Q15545 349 aaPredicted RBP22.69■■□□□ 1.22
LRRC42-202ENST00000371368 PNNQ9H307 717 aaKnown RBP22.68■■□□□ 1.22
LRRC42-202ENST00000371368 PIM2Q9P1W9 311 aa22.68■■□□□ 1.22
LRRC42-202ENST00000371368 ZNF330Q9Y3S2 320 aaPredicted RBP22.68■■□□□ 1.22
LRRC42-202ENST00000371368 USP16Q9Y5T5 823 aa22.68■■□□□ 1.22
LRRC42-202ENST00000371368 SERPINB2P05120 415 aa22.67■■□□□ 1.22
LRRC42-202ENST00000371368 TBC1D2BQ9UPU7 963 aa22.67■■□□□ 1.22
LRRC42-202ENST00000371368 SNRPA1P09661 255 aaKnown RBP22.66■■□□□ 1.22
LRRC42-202ENST00000371368 NFE2L2Q16236 605 aa22.66■■□□□ 1.22
LRRC42-202ENST00000371368 ATP10DQ9P241 1426 aa22.65■■□□□ 1.22
LRRC42-202ENST00000371368 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
LRRC42-202ENST00000371368 CHRNA5P30532 468 aa22.65■■□□□ 1.22
LRRC42-202ENST00000371368 ARHGAP27Q6ZUM4 889 aa22.65■■□□□ 1.22
LRRC42-202ENST00000371368 NPM2Q86SE8 214 aaKnown RBP22.65■■□□□ 1.22
LRRC42-202ENST00000371368 MIS18AQ9NYP9 233 aa22.65■■□□□ 1.22
LRRC42-202ENST00000371368 GIGYF1O75420 1035 aaPredicted RBP22.64■■□□□ 1.21
LRRC42-202ENST00000371368 BICDL1Q6ZP65 573 aa22.64■■□□□ 1.21
LRRC42-202ENST00000371368 ADCY9O60503 1353 aa22.63■■□□□ 1.21
LRRC42-202ENST00000371368 C1QTNF8P60827 252 aa22.63■■□□□ 1.21
LRRC42-202ENST00000371368 DALRD3Q5D0E6 543 aaKnown RBP22.63■■□□□ 1.21
LRRC42-202ENST00000371368 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
LRRC42-202ENST00000371368 BRCA1P38398 1863 aaKnown RBP22.62■■□□□ 1.21
LRRC42-202ENST00000371368 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
LRRC42-202ENST00000371368 TBC1D9BQ66K14 1250 aa22.62■■□□□ 1.21
LRRC42-202ENST00000371368 DLG5Q8TDM6 1919 aa22.62■■□□□ 1.21
LRRC42-202ENST00000371368 NRXN2Q9P2S2 1712 aa22.62■■□□□ 1.21
LRRC42-202ENST00000371368 PIP4K2AP48426 406 aaPredicted RBP22.61■■□□□ 1.21
LRRC42-202ENST00000371368 MYBBP1AQ9BQG0 1328 aaKnown RBP22.6■■□□□ 1.21
LRRC42-202ENST00000371368 CAMTA2O94983 1202 aa22.6■■□□□ 1.21
LRRC42-202ENST00000371368 PNISRQ8TF01 805 aaKnown RBP22.6■■□□□ 1.21
LRRC42-202ENST00000371368 DZIP3Q86Y13 1208 aaKnown RBP22.59■■□□□ 1.21
LRRC42-202ENST00000371368 THUMPD2Q9BTF0 503 aaKnown RBP22.59■■□□□ 1.21
LRRC42-202ENST00000371368 GPBP1L1Q9HC44 474 aaPredicted RBP22.59■■□□□ 1.21
LRRC42-202ENST00000371368 ZNF526Q8TF50 670 aaPredicted RBP22.58■■□□□ 1.21
LRRC42-202ENST00000371368 ARFGEF1Q9Y6D6 1849 aa22.57■■□□□ 1.2
LRRC42-202ENST00000371368 NBPF26B4DH59 902 aa22.57■■□□□ 1.2
LRRC42-202ENST00000371368 NBPF10Q6P3W6 841 aaKnown RBP22.57■■□□□ 1.2
LRRC42-202ENST00000371368 NBPF15Q8N660 670 aa22.57■■□□□ 1.2
LRRC42-202ENST00000371368 SCN7AQ01118 1682 aa22.57■■□□□ 1.2
LRRC42-202ENST00000371368 C2CD5Q86YS7 1000 aa22.56■■□□□ 1.2
LRRC42-202ENST00000371368 SETDB2Q96T68 719 aa22.56■■□□□ 1.2
LRRC42-202ENST00000371368 CARMIL3Q8ND23 1372 aa22.55■■□□□ 1.2
LRRC42-202ENST00000371368 H0YIN7 160 aa22.55■■□□□ 1.2
LRRC42-202ENST00000371368 RIPK4P57078 832 aa22.55■■□□□ 1.2
LRRC42-202ENST00000371368 EIF4A1P60842 406 aaKnown RBP22.54■■□□□ 1.2
LRRC42-202ENST00000371368 PRR5LQ6MZQ0 368 aa22.54■■□□□ 1.2
LRRC42-202ENST00000371368 KDM3BQ7LBC6 1761 aa22.53■■□□□ 1.2
LRRC42-202ENST00000371368 CLEC4GQ6UXB4 293 aa22.53■■□□□ 1.2
LRRC42-202ENST00000371368 CCDC24Q8N4L8 307 aa22.53■■□□□ 1.2
LRRC42-202ENST00000371368 BRIP1Q9BX63 1249 aa22.53■■□□□ 1.2
LRRC42-202ENST00000371368 PDE6BP35913 854 aa22.52■■□□□ 1.2
LRRC42-202ENST00000371368 TMPOP42166 694 aaKnown RBP22.52■■□□□ 1.2
LRRC42-202ENST00000371368 C9orf131Q5VYM1 1079 aa22.52■■□□□ 1.2
LRRC42-202ENST00000371368 TTLL6Q8N841 843 aa22.52■■□□□ 1.2
LRRC42-202ENST00000371368 BCORQ6W2J9 1755 aa22.51■■□□□ 1.19
LRRC42-202ENST00000371368 PDZRN3Q9UPQ7 1066 aa22.51■■□□□ 1.19
LRRC42-202ENST00000371368 ZNF652Q9Y2D9 606 aa22.51■■□□□ 1.19
LRRC42-202ENST00000371368 CNBD1Q8NA66 436 aa22.5■■□□□ 1.19
LRRC42-202ENST00000371368 PRKRIP1Q9H875 184 aaPredicted RBP22.5■■□□□ 1.19
LRRC42-202ENST00000371368 DLEC1Q9Y238 1755 aa22.49■■□□□ 1.19
LRRC42-202ENST00000371368 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
LRRC42-202ENST00000371368 NPHP1O15259 732 aa22.49■■□□□ 1.19
LRRC42-202ENST00000371368 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
LRRC42-202ENST00000371368 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
LRRC42-202ENST00000371368 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
LRRC42-202ENST00000371368 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
LRRC42-202ENST00000371368 LAMB4A4D0S4 1761 aa22.48■■□□□ 1.19
LRRC42-202ENST00000371368 ANKRD31Q8N7Z5 1873 aa22.48■■□□□ 1.19
LRRC42-202ENST00000371368 RGL2O15211 777 aa22.48■■□□□ 1.19
LRRC42-202ENST00000371368 ST5P78524 1137 aa22.48■■□□□ 1.19
LRRC42-202ENST00000371368 ZNF622Q969S3 477 aaKnown RBP eCLIP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms