RNA–Protein interactions for RNA: ENST00000371217.9

TCTN3-203, Transcript of tectonic family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-203ENST00000371217 ZKSCAN5Q9Y2L8 839 aa11.96□□□□□ -0.49
TCTN3-203ENST00000371217 PTPRUQ92729 1446 aa11.96□□□□□ -0.49
TCTN3-203ENST00000371217 AOX1Q06278 1338 aa11.96□□□□□ -0.5
TCTN3-203ENST00000371217 WDR33Q9C0J8 1336 aaKnown RBP11.96□□□□□ -0.5
TCTN3-203ENST00000371217 RAB11FIP3O75154 756 aa11.96□□□□□ -0.5
TCTN3-203ENST00000371217 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.5
TCTN3-203ENST00000371217 USP48Q86UV5 1035 aa11.96□□□□□ -0.5
TCTN3-203ENST00000371217 CCDC39Q9UFE4 941 aa11.96□□□□□ -0.5
TCTN3-203ENST00000371217 SRGAP3O43295 1099 aa11.95□□□□□ -0.5
TCTN3-203ENST00000371217 RHPN1Q8TCX5 695 aa11.95□□□□□ -0.5
TCTN3-203ENST00000371217 MAP3K5Q99683 1374 aa11.95□□□□□ -0.5
TCTN3-203ENST00000371217 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
TCTN3-203ENST00000371217 USHBP1Q8N6Y0 703 aa11.95□□□□□ -0.5
TCTN3-203ENST00000371217 IL17RAQ96F46 866 aa11.95□□□□□ -0.5
TCTN3-203ENST00000371217 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
TCTN3-203ENST00000371217 NALCNQ8IZF0 1738 aa11.95□□□□□ -0.5
TCTN3-203ENST00000371217 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
TCTN3-203ENST00000371217 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
TCTN3-203ENST00000371217 SGSM2O43147 1006 aa11.94□□□□□ -0.5
TCTN3-203ENST00000371217 PHF14O94880 888 aa11.94□□□□□ -0.5
TCTN3-203ENST00000371217 PI4K2BQ8TCG2 481 aa11.94□□□□□ -0.5
TCTN3-203ENST00000371217 EPB41L2O43491 1005 aaKnown RBP11.93□□□□□ -0.5
TCTN3-203ENST00000371217 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
TCTN3-203ENST00000371217 MCM5P33992 734 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 POLA2Q14181 598 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 CNTROBQ8N137 903 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 ABTB2Q8N961 1025 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 BABAM1Q9NWV8 329 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
TCTN3-203ENST00000371217 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
TCTN3-203ENST00000371217 RAD50Q92878 1312 aa11.92□□□□□ -0.5
TCTN3-203ENST00000371217 TERF1P54274 439 aa11.92□□□□□ -0.5
TCTN3-203ENST00000371217 RBM10P98175 930 aaKnown RBP11.92□□□□□ -0.5
TCTN3-203ENST00000371217 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
TCTN3-203ENST00000371217 SPG7Q9UQ90 795 aa11.92□□□□□ -0.5
TCTN3-203ENST00000371217 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
TCTN3-203ENST00000371217 AK2P54819 239 aa11.92□□□□□ -0.5
TCTN3-203ENST00000371217 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
TCTN3-203ENST00000371217 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
TCTN3-203ENST00000371217 LSG1Q9H089 658 aaKnown RBP11.92□□□□□ -0.5
TCTN3-203ENST00000371217 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 PI4KAP1Q8N8J0 262 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 PDCL3Q9H2J4 239 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 LIMCH1Q9UPQ0 1083 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 CNPY2Q9Y2B0 182 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 ZSCAN22P10073 491 aaPredicted RBP11.91□□□□□ -0.5
TCTN3-203ENST00000371217 DNAAF4Q8WXU2 420 aa11.91□□□□□ -0.5
TCTN3-203ENST00000371217 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
TCTN3-203ENST00000371217 XRN1Q8IZH2 1706 aaKnown RBP11.9□□□□□ -0.5
TCTN3-203ENST00000371217 ANXA1P04083 346 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 CPA1P15085 419 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 TTC14Q96N46 770 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 LGR6Q9HBX8 967 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 RPAP1Q9BWH6 1393 aaPredicted RBP11.9□□□□□ -0.5
TCTN3-203ENST00000371217 STX6O43752 255 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 SYT1P21579 422 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
TCTN3-203ENST00000371217 BEND3Q5T5X7 828 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 MPNDQ8N594 471 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 FAM13BQ9NYF5 915 aa11.9□□□□□ -0.5
TCTN3-203ENST00000371217 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
TCTN3-203ENST00000371217 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 FMN2Q9NZ56 1722 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 UQCRHLA0A096LP55 91 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 KCNQ3O43525 872 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 DTNBO60941 627 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 UQCRHP07919 91 aa11.89□□□□□ -0.51
TCTN3-203ENST00000371217 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
TCTN3-203ENST00000371217 GLRX3O76003 335 aaKnown RBP11.88□□□□□ -0.51
TCTN3-203ENST00000371217 FAM184AQ8NB25 1140 aa11.88□□□□□ -0.51
TCTN3-203ENST00000371217 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
TCTN3-203ENST00000371217 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
TCTN3-203ENST00000371217 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
TCTN3-203ENST00000371217 FIBPO43427 364 aa11.88□□□□□ -0.51
TCTN3-203ENST00000371217 UBE2HP62256 183 aa11.88□□□□□ -0.51
TCTN3-203ENST00000371217 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
TCTN3-203ENST00000371217 USP25Q9UHP3 1055 aa11.88□□□□□ -0.51
TCTN3-203ENST00000371217 KIAA2012Q0VF49 1180 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 UVSSAQ2YD98 709 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 CCDC83Q8IWF9 413 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 TUBGCP6Q96RT7 1819 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
TCTN3-203ENST00000371217 LETM1O95202 739 aaPredicted RBP11.87□□□□□ -0.51
TCTN3-203ENST00000371217 LARGE1O95461 756 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 F13A1P00488 732 aa11.87□□□□□ -0.51
TCTN3-203ENST00000371217 PTH1RQ03431 593 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms