RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 INTS5Q6P9B9 1019 aaKnown RBP19.86■□□□□ 0.77
LMO4-201ENST00000370542 C16orf71Q8IYS4 520 aaPredicted RBP19.86■□□□□ 0.77
LMO4-201ENST00000370542 C10orf71Q711Q0 1435 aa19.85■□□□□ 0.77
LMO4-201ENST00000370542 RFC4P35249 363 aa19.85■□□□□ 0.77
LMO4-201ENST00000370542 TGFB2P61812 414 aa19.85■□□□□ 0.77
LMO4-201ENST00000370542 BCL11AQ9H165 835 aa19.85■□□□□ 0.77
LMO4-201ENST00000370542 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
LMO4-201ENST00000370542 PXDNLA1KZ92 1463 aa19.84■□□□□ 0.77
LMO4-201ENST00000370542 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
LMO4-201ENST00000370542 USP42Q9H9J4 1324 aaKnown RBP19.82■□□□□ 0.76
LMO4-201ENST00000370542 CYP19A1P11511 503 aaPredicted RBP19.81■□□□□ 0.76
LMO4-201ENST00000370542 DNAJC10Q8IXB1 793 aa19.81■□□□□ 0.76
LMO4-201ENST00000370542 UBR2Q8IWV8 1755 aa19.8■□□□□ 0.76
LMO4-201ENST00000370542 SOS1Q07889 1333 aaPredicted RBP19.8■□□□□ 0.76
LMO4-201ENST00000370542 SLC39A6Q13433 755 aa19.8■□□□□ 0.76
LMO4-201ENST00000370542 CCDC87Q9NVE4 849 aa19.8■□□□□ 0.76
LMO4-201ENST00000370542 TM4SF1P30408 202 aa19.79■□□□□ 0.76
LMO4-201ENST00000370542 FKBP8Q14318 412 aa19.79■□□□□ 0.76
LMO4-201ENST00000370542 IL17REQ8NFR9 667 aa19.79■□□□□ 0.76
LMO4-201ENST00000370542 PARP3Q9Y6F1 533 aa19.79■□□□□ 0.76
LMO4-201ENST00000370542 ARHGAP27Q6ZUM4 889 aa19.78■□□□□ 0.76
LMO4-201ENST00000370542 GAS2L2Q8NHY3 880 aa19.78■□□□□ 0.76
LMO4-201ENST00000370542 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
LMO4-201ENST00000370542 BRCA1P38398 1863 aaKnown RBP19.77■□□□□ 0.76
LMO4-201ENST00000370542 KCNA3P22001 575 aa19.77■□□□□ 0.76
LMO4-201ENST00000370542 ERICH6BQ5W0A0 696 aa19.77■□□□□ 0.76
LMO4-201ENST00000370542 SMC1BQ8NDV3 1235 aa19.77■□□□□ 0.76
LMO4-201ENST00000370542 BCS1LQ9Y276 419 aa19.77■□□□□ 0.76
LMO4-201ENST00000370542 CEMIPQ8WUJ3 1361 aa19.77■□□□□ 0.76
LMO4-201ENST00000370542 N4BP2Q86UW6 1770 aaPredicted RBP19.77■□□□□ 0.76
LMO4-201ENST00000370542 SIPA1L3O60292 1781 aaPredicted RBP19.76■□□□□ 0.75
LMO4-201ENST00000370542 GNAT3A8MTJ3 354 aa19.76■□□□□ 0.75
LMO4-201ENST00000370542 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
LMO4-201ENST00000370542 DDR1Q08345 913 aa19.76■□□□□ 0.75
LMO4-201ENST00000370542 RSPH6AQ9H0K4 717 aa19.76■□□□□ 0.75
LMO4-201ENST00000370542 A0A0G2JLW4 131 aa19.75■□□□□ 0.75
LMO4-201ENST00000370542 DPEP1P16444 411 aa19.75■□□□□ 0.75
LMO4-201ENST00000370542 C9orf131Q5VYM1 1079 aa19.75■□□□□ 0.75
LMO4-201ENST00000370542 NARFQ9UHQ1 456 aa19.75■□□□□ 0.75
LMO4-201ENST00000370542 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
LMO4-201ENST00000370542 POLRMTO00411 1230 aaKnown RBP19.74■□□□□ 0.75
LMO4-201ENST00000370542 PPP2R1AP30153 589 aa19.74■□□□□ 0.75
LMO4-201ENST00000370542 PHACTR3Q96KR7 559 aa19.74■□□□□ 0.75
LMO4-201ENST00000370542 RRAGCQ9HB90 399 aa19.74■□□□□ 0.75
LMO4-201ENST00000370542 ZBTB1Q9Y2K1 713 aa19.74■□□□□ 0.75
LMO4-201ENST00000370542 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
LMO4-201ENST00000370542 CFAP53Q96M91 514 aa19.73■□□□□ 0.75
LMO4-201ENST00000370542 COL15A1P39059 1388 aa19.72■□□□□ 0.75
LMO4-201ENST00000370542 ZPR1O75312 459 aa19.72■□□□□ 0.75
LMO4-201ENST00000370542 EIF5P55010 431 aaKnown RBP19.72■□□□□ 0.75
LMO4-201ENST00000370542 USPL1Q5W0Q7 1092 aa19.72■□□□□ 0.75
LMO4-201ENST00000370542 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
LMO4-201ENST00000370542 RBM19Q9Y4C8 960 aaKnown RBP19.72■□□□□ 0.75
LMO4-201ENST00000370542 HEG1Q9ULI3 1381 aa19.71■□□□□ 0.75
LMO4-201ENST00000370542 NRXN2Q9P2S2 1712 aa19.71■□□□□ 0.75
LMO4-201ENST00000370542 ANP32CO43423 234 aa19.71■□□□□ 0.75
LMO4-201ENST00000370542 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
LMO4-201ENST00000370542 FANCIQ9NVI1 1328 aa19.71■□□□□ 0.75
LMO4-201ENST00000370542 ARFGEF1Q9Y6D6 1849 aa19.7■□□□□ 0.74
LMO4-201ENST00000370542 FCHSD2O94868 740 aa19.7■□□□□ 0.74
LMO4-201ENST00000370542 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
LMO4-201ENST00000370542 TEFQ10587 303 aa19.7■□□□□ 0.74
LMO4-201ENST00000370542 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
LMO4-201ENST00000370542 TTC5Q8N0Z6 440 aa19.7■□□□□ 0.74
LMO4-201ENST00000370542 TEX13AQ9BXU3 409 aaPredicted RBP19.7■□□□□ 0.74
LMO4-201ENST00000370542 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
LMO4-201ENST00000370542 STARD3NLO95772 234 aa19.69■□□□□ 0.74
LMO4-201ENST00000370542 NFIXQ14938 502 aa19.69■□□□□ 0.74
LMO4-201ENST00000370542 PIM2Q9P1W9 311 aa19.68■□□□□ 0.74
LMO4-201ENST00000370542 AFDNP55196 1824 aaKnown RBP19.67■□□□□ 0.74
LMO4-201ENST00000370542 FAM161AQ3B820 660 aa19.66■□□□□ 0.74
LMO4-201ENST00000370542 FMNL2Q96PY5 1086 aa19.66■□□□□ 0.74
LMO4-201ENST00000370542 PRDM10Q9NQV6 1147 aa19.66■□□□□ 0.74
LMO4-201ENST00000370542 A0A087WZG4 1122 aa19.65■□□□□ 0.74
LMO4-201ENST00000370542 HTATSF1O43719 755 aaKnown RBP19.65■□□□□ 0.74
LMO4-201ENST00000370542 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
LMO4-201ENST00000370542 IL6STP40189 918 aaPredicted RBP19.65■□□□□ 0.74
LMO4-201ENST00000370542 U2AF1L5P0DN76 240 aaPredicted RBP19.64■□□□□ 0.73
LMO4-201ENST00000370542 U2AF1Q01081 240 aaKnown RBP eCLIP19.64■□□□□ 0.73
LMO4-201ENST00000370542 DALRD3Q5D0E6 543 aaKnown RBP19.64■□□□□ 0.73
LMO4-201ENST00000370542 TNRC6CQ9HCJ0 1690 aaKnown RBP19.63■□□□□ 0.73
LMO4-201ENST00000370542 BTBD11A6QL63 1104 aa19.63■□□□□ 0.73
LMO4-201ENST00000370542 KCNQ3O43525 872 aa19.63■□□□□ 0.73
LMO4-201ENST00000370542 SERPINB2P05120 415 aa19.63■□□□□ 0.73
LMO4-201ENST00000370542 RNF181Q9P0P0 153 aa19.63■□□□□ 0.73
LMO4-201ENST00000370542 FOXN1O15353 648 aa19.62■□□□□ 0.73
LMO4-201ENST00000370542 CHRNA5P30532 468 aa19.62■□□□□ 0.73
LMO4-201ENST00000370542 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
LMO4-201ENST00000370542 SCN7AQ01118 1682 aa19.6■□□□□ 0.73
LMO4-201ENST00000370542 A1BGP04217 495 aa19.6■□□□□ 0.73
LMO4-201ENST00000370542 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
LMO4-201ENST00000370542 USP16Q9Y5T5 823 aa19.59■□□□□ 0.73
LMO4-201ENST00000370542 CAMTA2O94983 1202 aa19.58■□□□□ 0.72
LMO4-201ENST00000370542 VEGFAP15692 232 aaPredicted RBP19.58■□□□□ 0.72
LMO4-201ENST00000370542 TBC1D9BQ66K14 1250 aa19.58■□□□□ 0.72
LMO4-201ENST00000370542 MCM10Q7L590 875 aa19.58■□□□□ 0.72
LMO4-201ENST00000370542 RTF1Q92541 710 aaKnown RBP19.58■□□□□ 0.72
LMO4-201ENST00000370542 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.72
LMO4-201ENST00000370542 SBF1O95248 1867 aa19.58■□□□□ 0.72
LMO4-201ENST00000370542 ZC3H4Q9UPT8 1303 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms