RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 ANKRD31Q8N7Z5 1873 aa21.16■□□□□ 0.98
SSR4-204ENST00000370087 UBR2Q8IWV8 1755 aa21.16■□□□□ 0.98
SSR4-204ENST00000370087 CAPN15O75808 1086 aa21.16■□□□□ 0.98
SSR4-204ENST00000370087 PANK3Q9H999 370 aa21.16■□□□□ 0.98
SSR4-204ENST00000370087 CARMIL3Q8ND23 1372 aa21.15■□□□□ 0.98
SSR4-204ENST00000370087 COL11A2P13942 1736 aaPredicted RBP21.15■□□□□ 0.98
SSR4-204ENST00000370087 NFIXQ14938 502 aa21.14■□□□□ 0.97
SSR4-204ENST00000370087 SMC1BQ8NDV3 1235 aa21.14■□□□□ 0.97
SSR4-204ENST00000370087 COL15A1P39059 1388 aa21.13■□□□□ 0.97
SSR4-204ENST00000370087 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
SSR4-204ENST00000370087 LGR6Q9HBX8 967 aa21.13■□□□□ 0.97
SSR4-204ENST00000370087 ZPR1O75312 459 aa21.12■□□□□ 0.97
SSR4-204ENST00000370087 CYP19A1P11511 503 aaPredicted RBP21.12■□□□□ 0.97
SSR4-204ENST00000370087 IL13P35225 146 aa21.12■□□□□ 0.97
SSR4-204ENST00000370087 SLC39A6Q13433 755 aa21.12■□□□□ 0.97
SSR4-204ENST00000370087 ZBTB1Q9Y2K1 713 aa21.12■□□□□ 0.97
SSR4-204ENST00000370087 SLC52A2Q9HAB3 445 aa21.11■□□□□ 0.97
SSR4-204ENST00000370087 SCN7AQ01118 1682 aa21.11■□□□□ 0.97
SSR4-204ENST00000370087 ZC3H4Q9UPT8 1303 aaKnown RBP21.1■□□□□ 0.97
SSR4-204ENST00000370087 DICER1Q9UPY3 1922 aaKnown RBP21.1■□□□□ 0.97
SSR4-204ENST00000370087 MORC1Q86VD1 984 aa21.1■□□□□ 0.97
SSR4-204ENST00000370087 NARFQ9UHQ1 456 aa21.1■□□□□ 0.97
SSR4-204ENST00000370087 CACNA1SQ13698 1873 aa21.09■□□□□ 0.97
SSR4-204ENST00000370087 GLTPD2A6NH11 291 aa21.09■□□□□ 0.97
SSR4-204ENST00000370087 NFKBIEO00221 500 aa21.09■□□□□ 0.97
SSR4-204ENST00000370087 LMNB1P20700 586 aa21.09■□□□□ 0.97
SSR4-204ENST00000370087 AKAP4Q5JQC9 854 aa21.09■□□□□ 0.97
SSR4-204ENST00000370087 TNS4Q8IZW8 715 aa21.09■□□□□ 0.97
SSR4-204ENST00000370087 FER1L6Q2WGJ9 1857 aa21.09■□□□□ 0.97
SSR4-204ENST00000370087 SERPINB2P05120 415 aa21.07■□□□□ 0.96
SSR4-204ENST00000370087 HSPA5P11021 654 aaKnown RBP21.07■□□□□ 0.96
SSR4-204ENST00000370087 POTECB2RU33 542 aa21.06■□□□□ 0.96
SSR4-204ENST00000370087 RNMTO43148 476 aaKnown RBP21.06■□□□□ 0.96
SSR4-204ENST00000370087 HSPA1AP0DMV8 641 aaKnown RBP21.06■□□□□ 0.96
SSR4-204ENST00000370087 HSPA1BP0DMV9 641 aaKnown RBP21.06■□□□□ 0.96
SSR4-204ENST00000370087 VEGFAP15692 232 aaPredicted RBP21.06■□□□□ 0.96
SSR4-204ENST00000370087 C2CD5Q86YS7 1000 aa21.06■□□□□ 0.96
SSR4-204ENST00000370087 TTLL6Q8N841 843 aa21.05■□□□□ 0.96
SSR4-204ENST00000370087 SIPA1L3O60292 1781 aaPredicted RBP21.05■□□□□ 0.96
SSR4-204ENST00000370087 HMOX1P09601 288 aa21.03■□□□□ 0.96
SSR4-204ENST00000370087 TIMELESSQ9UNS1 1208 aa21.03■□□□□ 0.96
SSR4-204ENST00000370087 ARFGEF2Q9Y6D5 1785 aa21.02■□□□□ 0.96
SSR4-204ENST00000370087 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
SSR4-204ENST00000370087 BICDL1Q6ZP65 573 aa21.02■□□□□ 0.96
SSR4-204ENST00000370087 MTHFSDQ2M296 383 aaKnown RBP21.01■□□□□ 0.95
SSR4-204ENST00000370087 CCDC24Q8N4L8 307 aa21.01■□□□□ 0.95
SSR4-204ENST00000370087 SLX4Q8IY92 1834 aa21.01■□□□□ 0.95
SSR4-204ENST00000370087 BCORQ6W2J9 1755 aa21■□□□□ 0.95
SSR4-204ENST00000370087 H0YIN7 160 aa21■□□□□ 0.95
SSR4-204ENST00000370087 EIF4G2P78344 907 aaKnown RBP eCLIP21■□□□□ 0.95
SSR4-204ENST00000370087 ZNF219Q9P2Y4 722 aaPredicted RBP21■□□□□ 0.95
SSR4-204ENST00000370087 TBC1D9BQ66K14 1250 aa20.99■□□□□ 0.95
SSR4-204ENST00000370087 EIF5P55010 431 aaKnown RBP20.98■□□□□ 0.95
SSR4-204ENST00000370087 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
SSR4-204ENST00000370087 AMER1Q5JTC6 1135 aaPredicted RBP20.98■□□□□ 0.95
SSR4-204ENST00000370087 VSIG10Q8N0Z9 540 aa20.98■□□□□ 0.95
SSR4-204ENST00000370087 C21orf2O43822 256 aa20.97■□□□□ 0.95
SSR4-204ENST00000370087 POTEIP0CG38 1075 aa20.97■□□□□ 0.95
SSR4-204ENST00000370087 POTEJP0CG39 1038 aa20.97■□□□□ 0.95
SSR4-204ENST00000370087 ZNF622Q969S3 477 aaKnown RBP eCLIP20.96■□□□□ 0.95
SSR4-204ENST00000370087 KNSTRNQ9Y448 316 aa20.96■□□□□ 0.95
SSR4-204ENST00000370087 PRR5LQ6MZQ0 368 aa20.95■□□□□ 0.94
SSR4-204ENST00000370087 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
SSR4-204ENST00000370087 ERFEQ4G0M1 354 aa20.94■□□□□ 0.94
SSR4-204ENST00000370087 ZNF496Q96IT1 587 aaPredicted RBP20.94■□□□□ 0.94
SSR4-204ENST00000370087 BRIP1Q9BX63 1249 aa20.93■□□□□ 0.94
SSR4-204ENST00000370087 MKRN1Q9UHC7 482 aaKnown RBP20.93■□□□□ 0.94
SSR4-204ENST00000370087 TBC1D2BQ9UPU7 963 aa20.93■□□□□ 0.94
SSR4-204ENST00000370087 HEG1Q9ULI3 1381 aa20.93■□□□□ 0.94
SSR4-204ENST00000370087 DDNO94850 711 aaPredicted RBP20.91■□□□□ 0.94
SSR4-204ENST00000370087 STARD3NLO95772 234 aa20.91■□□□□ 0.94
SSR4-204ENST00000370087 CHADLQ6NUI6 762 aa20.91■□□□□ 0.94
SSR4-204ENST00000370087 DPY19L2Q6NUT2 758 aa20.91■□□□□ 0.94
SSR4-204ENST00000370087 ZNF330Q9Y3S2 320 aaPredicted RBP20.91■□□□□ 0.94
SSR4-204ENST00000370087 LTBP3Q9NS15 1303 aa20.9■□□□□ 0.94
SSR4-204ENST00000370087 A0A087WZG4 1122 aa20.9■□□□□ 0.94
SSR4-204ENST00000370087 PDE6BP35913 854 aa20.9■□□□□ 0.94
SSR4-204ENST00000370087 TTC5Q8N0Z6 440 aa20.9■□□□□ 0.94
SSR4-204ENST00000370087 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
SSR4-204ENST00000370087 SCN4AP35499 1836 aa20.9■□□□□ 0.94
SSR4-204ENST00000370087 CLSPNQ9HAW4 1339 aa20.89■□□□□ 0.93
SSR4-204ENST00000370087 IL17REQ8NFR9 667 aa20.89■□□□□ 0.93
SSR4-204ENST00000370087 TAOK3Q9H2K8 898 aa20.89■□□□□ 0.93
SSR4-204ENST00000370087 ADAMTSL1Q8N6G6 1762 aa20.88■□□□□ 0.93
SSR4-204ENST00000370087 DIAPH1O60610 1272 aaKnown RBP20.88■□□□□ 0.93
SSR4-204ENST00000370087 CAMTA2O94983 1202 aa20.88■□□□□ 0.93
SSR4-204ENST00000370087 A1BGP04217 495 aa20.88■□□□□ 0.93
SSR4-204ENST00000370087 PRPF40BQ6NWY9 871 aaKnown RBP20.88■□□□□ 0.93
SSR4-204ENST00000370087 ZNF790Q6PG37 636 aa20.88■□□□□ 0.93
SSR4-204ENST00000370087 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
SSR4-204ENST00000370087 CNTNAP1P78357 1384 aa20.86■□□□□ 0.93
SSR4-204ENST00000370087 FOXN1O15353 648 aa20.86■□□□□ 0.93
SSR4-204ENST00000370087 KCNQ3O43525 872 aa20.86■□□□□ 0.93
SSR4-204ENST00000370087 IL6STP40189 918 aaPredicted RBP20.86■□□□□ 0.93
SSR4-204ENST00000370087 CNBD1Q8NA66 436 aa20.86■□□□□ 0.93
SSR4-204ENST00000370087 PDZRN3Q9UPQ7 1066 aa20.86■□□□□ 0.93
SSR4-204ENST00000370087 KIF7Q2M1P5 1343 aa20.85■□□□□ 0.93
SSR4-204ENST00000370087 PASKQ96RG2 1323 aa20.85■□□□□ 0.93
SSR4-204ENST00000370087 SRGNP10124 158 aa20.85■□□□□ 0.93
SSR4-204ENST00000370087 PIP4K2AP48426 406 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms