RNA–Protein interactions for RNA: ENST00000369957.5

MECP2-202, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-202ENST00000369957 IL13P35225 146 aa12.51□□□□□ -0.41
MECP2-202ENST00000369957 FSTL1Q12841 308 aa12.51□□□□□ -0.41
MECP2-202ENST00000369957 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
MECP2-202ENST00000369957 AFDNP55196 1824 aaKnown RBP12.51□□□□□ -0.41
MECP2-202ENST00000369957 CYP19A1P11511 503 aaPredicted RBP12.5□□□□□ -0.41
MECP2-202ENST00000369957 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
MECP2-202ENST00000369957 NFIXQ14938 502 aa12.5□□□□□ -0.41
MECP2-202ENST00000369957 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
MECP2-202ENST00000369957 SOS1Q07889 1333 aaPredicted RBP12.5□□□□□ -0.41
MECP2-202ENST00000369957 KDM2BQ8NHM5 1336 aa12.5□□□□□ -0.41
MECP2-202ENST00000369957 NRXN2Q9P2S2 1712 aa12.49□□□□□ -0.41
MECP2-202ENST00000369957 TNRC6CQ9HCJ0 1690 aaKnown RBP12.49□□□□□ -0.41
MECP2-202ENST00000369957 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
MECP2-202ENST00000369957 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
MECP2-202ENST00000369957 PER1O15534 1290 aaPredicted RBP12.48□□□□□ -0.41
MECP2-202ENST00000369957 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
MECP2-202ENST00000369957 ZBTB1Q9Y2K1 713 aa12.48□□□□□ -0.41
MECP2-202ENST00000369957 MRC1P22897 1456 aa12.47□□□□□ -0.41
MECP2-202ENST00000369957 CARMIL3Q8ND23 1372 aa12.47□□□□□ -0.41
MECP2-202ENST00000369957 ZPR1O75312 459 aa12.47□□□□□ -0.41
MECP2-202ENST00000369957 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
MECP2-202ENST00000369957 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
MECP2-202ENST00000369957 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
MECP2-202ENST00000369957 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
MECP2-202ENST00000369957 NARFQ9UHQ1 456 aa12.47□□□□□ -0.41
MECP2-202ENST00000369957 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
MECP2-202ENST00000369957 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.41
MECP2-202ENST00000369957 COL15A1P39059 1388 aa12.46□□□□□ -0.41
MECP2-202ENST00000369957 POTECB2RU33 542 aa12.46□□□□□ -0.41
MECP2-202ENST00000369957 NFKBIEO00221 500 aa12.46□□□□□ -0.41
MECP2-202ENST00000369957 RNMTO43148 476 aaKnown RBP12.46□□□□□ -0.41
MECP2-202ENST00000369957 SERPINB2P05120 415 aa12.46□□□□□ -0.41
MECP2-202ENST00000369957 SMC1BQ8NDV3 1235 aa12.46□□□□□ -0.41
MECP2-202ENST00000369957 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
MECP2-202ENST00000369957 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
MECP2-202ENST00000369957 GLTPD2A6NH11 291 aa12.45□□□□□ -0.42
MECP2-202ENST00000369957 CAPN15O75808 1086 aa12.45□□□□□ -0.42
MECP2-202ENST00000369957 HMOX1P09601 288 aa12.45□□□□□ -0.42
MECP2-202ENST00000369957 LMNB1P20700 586 aa12.44□□□□□ -0.42
MECP2-202ENST00000369957 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
MECP2-202ENST00000369957 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
MECP2-202ENST00000369957 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
MECP2-202ENST00000369957 ANKRD31Q8N7Z5 1873 aa12.44□□□□□ -0.42
MECP2-202ENST00000369957 PCNTO95613 3336 aa12.44□□□□□ -0.42
MECP2-202ENST00000369957 VEGFAP15692 232 aaPredicted RBP12.43□□□□□ -0.42
MECP2-202ENST00000369957 CANXP27824 592 aaKnown RBP12.43□□□□□ -0.42
MECP2-202ENST00000369957 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
MECP2-202ENST00000369957 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
MECP2-202ENST00000369957 TTLL6Q8N841 843 aa12.43□□□□□ -0.42
MECP2-202ENST00000369957 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
MECP2-202ENST00000369957 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
MECP2-202ENST00000369957 HSPA1AP0DMV8 641 aaKnown RBP12.41□□□□□ -0.42
MECP2-202ENST00000369957 HSPA1BP0DMV9 641 aaKnown RBP12.41□□□□□ -0.42
MECP2-202ENST00000369957 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
MECP2-202ENST00000369957 TBC1D9BQ66K14 1250 aa12.41□□□□□ -0.42
MECP2-202ENST00000369957 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
MECP2-202ENST00000369957 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
MECP2-202ENST00000369957 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.42
MECP2-202ENST00000369957 H0YIN7 160 aa12.4□□□□□ -0.42
MECP2-202ENST00000369957 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
MECP2-202ENST00000369957 C21orf2O43822 256 aa12.39□□□□□ -0.43
MECP2-202ENST00000369957 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
MECP2-202ENST00000369957 POTEJP0CG39 1038 aa12.39□□□□□ -0.43
MECP2-202ENST00000369957 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
MECP2-202ENST00000369957 FER1L6Q2WGJ9 1857 aa12.39□□□□□ -0.43
MECP2-202ENST00000369957 PRR5LQ6MZQ0 368 aa12.38□□□□□ -0.43
MECP2-202ENST00000369957 IL17REQ8NFR9 667 aa12.38□□□□□ -0.43
MECP2-202ENST00000369957 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.436e-14■□□□□ 8.7
MECP2-202ENST00000369957 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
MECP2-202ENST00000369957 DICER1Q9UPY3 1922 aaKnown RBP12.37□□□□□ -0.43
MECP2-202ENST00000369957 RALBP1Q15311 655 aa12.37□□□□□ -0.43
MECP2-202ENST00000369957 BRIP1Q9BX63 1249 aa12.37□□□□□ -0.43
MECP2-202ENST00000369957 SCN7AQ01118 1682 aa12.37□□□□□ -0.43
MECP2-202ENST00000369957 SLX4Q8IY92 1834 aa12.37□□□□□ -0.43
MECP2-202ENST00000369957 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
MECP2-202ENST00000369957 HEG1Q9ULI3 1381 aa12.36□□□□□ -0.43
MECP2-202ENST00000369957 KCNQ3O43525 872 aa12.36□□□□□ -0.43
MECP2-202ENST00000369957 DDNO94850 711 aaPredicted RBP12.36□□□□□ -0.43
MECP2-202ENST00000369957 A1BGP04217 495 aa12.36□□□□□ -0.43
MECP2-202ENST00000369957 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
MECP2-202ENST00000369957 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
MECP2-202ENST00000369957 COL3A1P02461 1466 aaPredicted RBP12.35□□□□□ -0.43
MECP2-202ENST00000369957 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
MECP2-202ENST00000369957 CAMTA2O94983 1202 aa12.35□□□□□ -0.43
MECP2-202ENST00000369957 STARD3NLO95772 234 aa12.35□□□□□ -0.43
MECP2-202ENST00000369957 ZNF790Q6PG37 636 aa12.35□□□□□ -0.43
MECP2-202ENST00000369957 ZNF330Q9Y3S2 320 aaPredicted RBP12.35□□□□□ -0.43
MECP2-202ENST00000369957 CACNA1SQ13698 1873 aa12.34□□□□□ -0.43
MECP2-202ENST00000369957 A0A087WZG4 1122 aa12.34□□□□□ -0.43
MECP2-202ENST00000369957 PPP2R1AP30153 589 aa12.34□□□□□ -0.43
MECP2-202ENST00000369957 PDE6BP35913 854 aa12.34□□□□□ -0.43
MECP2-202ENST00000369957 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
MECP2-202ENST00000369957 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
MECP2-202ENST00000369957 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
MECP2-202ENST00000369957 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
MECP2-202ENST00000369957 LTBP3Q9NS15 1303 aa12.34□□□□□ -0.43
MECP2-202ENST00000369957 ANP32CO43423 234 aa12.33□□□□□ -0.44
MECP2-202ENST00000369957 SRGNP10124 158 aa12.33□□□□□ -0.44
MECP2-202ENST00000369957 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
MECP2-202ENST00000369957 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms