RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 KCNJ4P48050 445 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 IBTKQ9P2D0 1353 aaPredicted RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 MBD3O95983 291 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 HOXC9P31274 260 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 SIL1Q9H173 461 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 FLT4P35916 1363 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
LRIF1-201ENST00000369763 FAM173BQ6P4H8 233 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
LRIF1-201ENST00000369763 TTC12Q9H892 705 aaPredicted RBP13.15□□□□□ -0.3
LRIF1-201ENST00000369763 TNRQ92752 1358 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 GIMAP6Q6P9H5 292 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 ZMYND15Q9H091 742 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
LRIF1-201ENST00000369763 SALL3Q9BXA9 1300 aa13.14□□□□□ -0.31
LRIF1-201ENST00000369763 TMEM2Q9UHN6 1383 aa13.14□□□□□ -0.31
LRIF1-201ENST00000369763 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
LRIF1-201ENST00000369763 ZKSCAN5Q9Y2L8 839 aa13.14□□□□□ -0.31
LRIF1-201ENST00000369763 SNX14Q9Y5W7 946 aa13.14□□□□□ -0.31
LRIF1-201ENST00000369763 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
LRIF1-201ENST00000369763 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
LRIF1-201ENST00000369763 DIAPH3Q9NSV4 1193 aa13.14□□□□□ -0.31
LRIF1-201ENST00000369763 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
LRIF1-201ENST00000369763 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
LRIF1-201ENST00000369763 SMC3Q9UQE7 1217 aa13.14□□□□□ -0.31
LRIF1-201ENST00000369763 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 TPM2P07951 284 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 MCM2P49736 904 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 PTH1RQ03431 593 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 CUL4AQ13619 759 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
LRIF1-201ENST00000369763 SYT1P21579 422 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 PDLIM2Q96JY6 352 aa13.13□□□□□ -0.31
LRIF1-201ENST00000369763 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 KLHDC4Q8TBB5 520 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
LRIF1-201ENST00000369763 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 HSPA4P34932 840 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 DNM1Q05193 864 aaKnown RBP13.12□□□□□ -0.31
LRIF1-201ENST00000369763 TEFQ10587 303 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 PI4K2BQ8TCG2 481 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-201ENST00000369763 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
LRIF1-201ENST00000369763 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-201ENST00000369763 STK3Q13188 491 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 CAMK4Q16566 473 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
LRIF1-201ENST00000369763 SYAP1Q96A49 352 aaPredicted RBP13.12□□□□□ -0.31
LRIF1-201ENST00000369763 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
LRIF1-201ENST00000369763 KCNA6P17658 529 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 SGSM2O43147 1006 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 STX6O43752 255 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 CCDC39Q9UFE4 941 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 KIF1BPQ96EK5 621 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 ARHGEF10O15013 1369 aa13.11□□□□□ -0.31
LRIF1-201ENST00000369763 GJB2P29033 226 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 FOSBP53539 338 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
LRIF1-201ENST00000369763 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 ADCY5O95622 1261 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 IFIT2P09913 472 aaKnown RBP13.1□□□□□ -0.31
LRIF1-201ENST00000369763 AACSQ86V21 672 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 STAP2Q9UGK3 403 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
LRIF1-201ENST00000369763 ANAPC15P60006 121 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 ZSCAN22P10073 491 aaPredicted RBP13.09□□□□□ -0.31
LRIF1-201ENST00000369763 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
LRIF1-201ENST00000369763 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
LRIF1-201ENST00000369763 INTS4Q96HW7 963 aaKnown RBP13.09□□□□□ -0.31
LRIF1-201ENST00000369763 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
LRIF1-201ENST00000369763 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 ADAMTS13Q76LX8 1427 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 CLASRPQ8N2M8 674 aaKnown RBP13.09□□□□□ -0.31
LRIF1-201ENST00000369763 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 LIMCH1Q9UPQ0 1083 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 PTPRUQ92729 1446 aa13.09□□□□□ -0.31
LRIF1-201ENST00000369763 RAD50Q92878 1312 aa13.08□□□□□ -0.31
LRIF1-201ENST00000369763 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.31
LRIF1-201ENST00000369763 NRXN3Q9Y4C0 1643 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms