RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 SBF2Q86WG5 1849 aa21.98■■□□□ 1.11
UBE3D-203ENST00000369747 EIF2S2P20042 333 aaKnown RBP21.96■■□□□ 1.11
UBE3D-203ENST00000369747 ATF7IPQ6VMQ6 1270 aa21.96■■□□□ 1.11
UBE3D-203ENST00000369747 FTSJ3Q8IY81 847 aaKnown RBP21.96■■□□□ 1.11
UBE3D-203ENST00000369747 ZNF428Q96B54 188 aa21.96■■□□□ 1.11
UBE3D-203ENST00000369747 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
UBE3D-203ENST00000369747 C5P01031 1676 aa21.95■■□□□ 1.1
UBE3D-203ENST00000369747 NHSQ6T4R5 1651 aa21.95■■□□□ 1.1
UBE3D-203ENST00000369747 FAM196AQ6ZSG2 479 aa21.95■■□□□ 1.1
UBE3D-203ENST00000369747 KIF16BQ96L93 1317 aa21.94■■□□□ 1.1
UBE3D-203ENST00000369747 PCDHB15Q9Y5E8 787 aa21.94■■□□□ 1.1
UBE3D-203ENST00000369747 HOXB7P09629 217 aa21.94■■□□□ 1.1
UBE3D-203ENST00000369747 SNRPA1P09661 255 aaKnown RBP21.94■■□□□ 1.1
UBE3D-203ENST00000369747 BRPF1P55201 1214 aaPredicted RBP21.94■■□□□ 1.1
UBE3D-203ENST00000369747 HDGFL1Q5TGJ6 251 aa21.94■■□□□ 1.1
UBE3D-203ENST00000369747 RBM42Q9BTD8 480 aaKnown RBP21.93■■□□□ 1.1
UBE3D-203ENST00000369747 USP16Q9Y5T5 823 aa21.93■■□□□ 1.1
UBE3D-203ENST00000369747 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
UBE3D-203ENST00000369747 BTAF1O14981 1849 aa21.92■■□□□ 1.1
UBE3D-203ENST00000369747 SLC4A9Q96Q91 983 aa21.92■■□□□ 1.1
UBE3D-203ENST00000369747 MRPL50Q8N5N7 158 aaKnown RBP21.91■■□□□ 1.1
UBE3D-203ENST00000369747 TRIM37O94972 964 aa21.9■■□□□ 1.1
UBE3D-203ENST00000369747 CCDC30Q5VVM6 783 aa21.9■■□□□ 1.1
UBE3D-203ENST00000369747 PALLDQ8WX93 1383 aa21.9■■□□□ 1.1
UBE3D-203ENST00000369747 IPO8O15397 1037 aaKnown RBP21.9■■□□□ 1.1
UBE3D-203ENST00000369747 SLC4A2P04920 1241 aa21.9■■□□□ 1.1
UBE3D-203ENST00000369747 BCL11BQ9C0K0 894 aaPredicted RBP21.9■■□□□ 1.1
UBE3D-203ENST00000369747 CHPF2Q9P2E5 772 aa21.89■■□□□ 1.09
UBE3D-203ENST00000369747 ANXA1P04083 346 aa21.88■■□□□ 1.09
UBE3D-203ENST00000369747 RGS3P49796 1198 aa21.88■■□□□ 1.09
UBE3D-203ENST00000369747 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
UBE3D-203ENST00000369747 DDX19BQ9UMR2 479 aa21.88■■□□□ 1.09
UBE3D-203ENST00000369747 DNAJC10Q8IXB1 793 aa21.87■■□□□ 1.09
UBE3D-203ENST00000369747 VSIG10Q8N0Z9 540 aa21.87■■□□□ 1.09
UBE3D-203ENST00000369747 TMEM57Q8N5G2 664 aa21.87■■□□□ 1.09
UBE3D-203ENST00000369747 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
UBE3D-203ENST00000369747 ANP32AP39687 249 aaKnown RBP21.86■■□□□ 1.09
UBE3D-203ENST00000369747 PIP4K2AP48426 406 aaPredicted RBP21.86■■□□□ 1.09
UBE3D-203ENST00000369747 SIK1P57059 783 aa21.86■■□□□ 1.09
UBE3D-203ENST00000369747 PROSER3Q2NL68 480 aa21.86■■□□□ 1.09
UBE3D-203ENST00000369747 G2E3Q7L622 706 aa21.86■■□□□ 1.09
UBE3D-203ENST00000369747 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
UBE3D-203ENST00000369747 SMARCC1Q92922 1105 aaPredicted RBP21.86■■□□□ 1.09
UBE3D-203ENST00000369747 LAMB4A4D0S4 1761 aa21.86■■□□□ 1.09
UBE3D-203ENST00000369747 KCNQ4P56696 695 aa21.84■■□□□ 1.09
UBE3D-203ENST00000369747 PDIA6Q15084 440 aa21.84■■□□□ 1.09
UBE3D-203ENST00000369747 ATP6V1AP38606 617 aa21.84■■□□□ 1.09
UBE3D-203ENST00000369747 RWDD1Q9H446 243 aaPredicted RBP21.84■■□□□ 1.09
UBE3D-203ENST00000369747 PHAXQ9H814 394 aaKnown RBP21.84■■□□□ 1.09
UBE3D-203ENST00000369747 DBF4Q9UBU7 674 aaPredicted RBP21.84■■□□□ 1.09
UBE3D-203ENST00000369747 TJP1Q07157 1748 aa21.83■■□□□ 1.09
UBE3D-203ENST00000369747 A1BGP04217 495 aa21.83■■□□□ 1.09
UBE3D-203ENST00000369747 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.09
UBE3D-203ENST00000369747 ITPK1Q13572 414 aa21.82■■□□□ 1.08
UBE3D-203ENST00000369747 C8orf34Q49A92 452 aa21.82■■□□□ 1.08
UBE3D-203ENST00000369747 CHMP4AQ9BY43 222 aa21.82■■□□□ 1.08
UBE3D-203ENST00000369747 MYL6BP14649 208 aa21.82■■□□□ 1.08
UBE3D-203ENST00000369747 FAM161AQ3B820 660 aa21.82■■□□□ 1.08
UBE3D-203ENST00000369747 DDX21Q9NR30 783 aaKnown RBP eCLIP21.82■■□□□ 1.08
UBE3D-203ENST00000369747 CACNA1FO60840 1977 aa21.82■■□□□ 1.08
UBE3D-203ENST00000369747 NBPF26B4DH59 902 aa21.81■■□□□ 1.08
UBE3D-203ENST00000369747 NBPF14Q5TI25 921 aa21.81■■□□□ 1.08
UBE3D-203ENST00000369747 NBPF10Q6P3W6 841 aaKnown RBP21.81■■□□□ 1.08
UBE3D-203ENST00000369747 NBPF15Q8N660 670 aa21.81■■□□□ 1.08
UBE3D-203ENST00000369747 ANP32EQ9BTT0 268 aa21.81■■□□□ 1.08
UBE3D-203ENST00000369747 TEX13AQ9BXU3 409 aaPredicted RBP21.81■■□□□ 1.08
UBE3D-203ENST00000369747 ZBTB40Q9NUA8 1239 aa21.81■■□□□ 1.08
UBE3D-203ENST00000369747 CYP19A1P11511 503 aaPredicted RBP21.8■■□□□ 1.08
UBE3D-203ENST00000369747 FLIIQ13045 1269 aa21.8■■□□□ 1.08
UBE3D-203ENST00000369747 IPO9Q96P70 1041 aaKnown RBP21.8■■□□□ 1.08
UBE3D-203ENST00000369747 STARD3NLO95772 234 aa21.8■■□□□ 1.08
UBE3D-203ENST00000369747 LRP10Q7Z4F1 713 aa21.79■■□□□ 1.08
UBE3D-203ENST00000369747 LY75O60449 1722 aa21.79■■□□□ 1.08
UBE3D-203ENST00000369747 NPM2Q86SE8 214 aaKnown RBP21.78■■□□□ 1.08
UBE3D-203ENST00000369747 HDAC1Q13547 482 aaPredicted RBP21.78■■□□□ 1.08
UBE3D-203ENST00000369747 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
UBE3D-203ENST00000369747 PDZRN3Q9UPQ7 1066 aa21.78■■□□□ 1.08
UBE3D-203ENST00000369747 ABCC4O15439 1325 aa21.77■■□□□ 1.08
UBE3D-203ENST00000369747 FKBP5Q13451 457 aaPredicted RBP21.77■■□□□ 1.08
UBE3D-203ENST00000369747 CCNL1Q9UK58 526 aaPredicted RBP21.77■■□□□ 1.08
UBE3D-203ENST00000369747 PTPRCP08575 1304 aa21.77■■□□□ 1.07
UBE3D-203ENST00000369747 ZNF831Q5JPB2 1677 aa21.76■■□□□ 1.07
UBE3D-203ENST00000369747 CICQ96RK0 1608 aaPredicted RBP21.76■■□□□ 1.07
UBE3D-203ENST00000369747 F6X3S4 739 aa21.76■■□□□ 1.07
UBE3D-203ENST00000369747 AIMP1Q12904 312 aaKnown RBP21.76■■□□□ 1.07
UBE3D-203ENST00000369747 LINC00116Q8NCU8 138 aa21.76■■□□□ 1.07
UBE3D-203ENST00000369747 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
UBE3D-203ENST00000369747 APBA3O96018 575 aa21.75■■□□□ 1.07
UBE3D-203ENST00000369747 LRRC4BQ9NT99 713 aa21.75■■□□□ 1.07
UBE3D-203ENST00000369747 ZBTB1Q9Y2K1 713 aa21.75■■□□□ 1.07
UBE3D-203ENST00000369747 MYH14Q7Z406 1995 aaKnown RBP21.75■■□□□ 1.07
UBE3D-203ENST00000369747 COL5A3P25940 1745 aaPredicted RBP21.75■■□□□ 1.07
UBE3D-203ENST00000369747 CRKLP46109 303 aaKnown RBP21.74■■□□□ 1.07
UBE3D-203ENST00000369747 TNS1Q9HBL0 1735 aaKnown RBP21.74■■□□□ 1.07
UBE3D-203ENST00000369747 INTS5Q6P9B9 1019 aaKnown RBP21.74■■□□□ 1.07
UBE3D-203ENST00000369747 COPS6Q7L5N1 327 aa21.74■■□□□ 1.07
UBE3D-203ENST00000369747 XAGE3Q8WTP9 111 aa21.74■■□□□ 1.07
UBE3D-203ENST00000369747 API5Q9BZZ5 524 aaKnown RBP21.74■■□□□ 1.07
UBE3D-203ENST00000369747 NOP58Q9Y2X3 529 aaKnown RBP21.74■■□□□ 1.07
UBE3D-203ENST00000369747 ZBTB7BO15156 539 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms