RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 NLRP6P59044 892 aa19.25■□□□□ 0.67
SYNCRIP-202ENST00000369622 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
SYNCRIP-202ENST00000369622 PLCB2Q00722 1185 aa19.25■□□□□ 0.67
SYNCRIP-202ENST00000369622 LARP6Q9BRS8 491 aaKnown RBP19.25■□□□□ 0.67
SYNCRIP-202ENST00000369622 ESYT1Q9BSJ8 1104 aa19.25■□□□□ 0.67
SYNCRIP-202ENST00000369622 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
SYNCRIP-202ENST00000369622 UNC5CLQ8IV45 518 aa19.24■□□□□ 0.67
SYNCRIP-202ENST00000369622 TMEM63CQ9P1W3 806 aa19.24■□□□□ 0.67
SYNCRIP-202ENST00000369622 NOLC1Q14978 699 aaKnown RBP eCLIP19.23■□□□□ 0.67
SYNCRIP-202ENST00000369622 CCDC30Q5VVM6 783 aa19.23■□□□□ 0.67
SYNCRIP-202ENST00000369622 USHBP1Q8N6Y0 703 aa19.23■□□□□ 0.67
SYNCRIP-202ENST00000369622 DTNBO60941 627 aa19.23■□□□□ 0.67
SYNCRIP-202ENST00000369622 GNAI3P08754 354 aa19.23■□□□□ 0.67
SYNCRIP-202ENST00000369622 LTKP29376 864 aa19.23■□□□□ 0.67
SYNCRIP-202ENST00000369622 KLHL34Q8N239 644 aa19.22■□□□□ 0.67
SYNCRIP-202ENST00000369622 MCM5P33992 734 aa19.22■□□□□ 0.67
SYNCRIP-202ENST00000369622 CRB1P82279 1406 aa19.21■□□□□ 0.67
SYNCRIP-202ENST00000369622 SURF6O75683 361 aaKnown RBP19.21■□□□□ 0.67
SYNCRIP-202ENST00000369622 UBTFL1P0CB47 393 aaPredicted RBP19.21■□□□□ 0.67
SYNCRIP-202ENST00000369622 CHMLP26374 656 aa19.21■□□□□ 0.67
SYNCRIP-202ENST00000369622 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
SYNCRIP-202ENST00000369622 AMOTL2Q9Y2J4 779 aa19.2■□□□□ 0.66
SYNCRIP-202ENST00000369622 PLEKHG3A1L390 1219 aa19.19■□□□□ 0.66
SYNCRIP-202ENST00000369622 GNAT3A8MTJ3 354 aa19.19■□□□□ 0.66
SYNCRIP-202ENST00000369622 ATP8B2P98198 1209 aa19.19■□□□□ 0.66
SYNCRIP-202ENST00000369622 TRIM34Q9BYJ4 488 aa19.19■□□□□ 0.66
SYNCRIP-202ENST00000369622 OSBPL3Q9H4L5 887 aa19.19■□□□□ 0.66
SYNCRIP-202ENST00000369622 SECISBP2LQ93073 1101 aaKnown RBP19.19■□□□□ 0.66
SYNCRIP-202ENST00000369622 RIOK3O14730 519 aaKnown RBP19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 HMGN5P82970 282 aaKnown RBP19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 TAF3Q5VWG9 929 aa19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 PRIMPOLQ96LW4 560 aa19.18■□□□□ 0.66
SYNCRIP-202ENST00000369622 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 IL25Q9H293 177 aa19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 USP6P35125 1406 aa19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 IRX3P78415 501 aaPredicted RBP19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 LRSAM1Q6UWE0 723 aa19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 USP25Q9UHP3 1055 aa19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 TNRQ92752 1358 aa19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 ANXA1P04083 346 aa19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 NAA30Q147X3 362 aaPredicted RBP19.17■□□□□ 0.66
SYNCRIP-202ENST00000369622 OS9Q13438 667 aaPredicted RBP19.16■□□□□ 0.66
SYNCRIP-202ENST00000369622 IL17REQ8NFR9 667 aa19.16■□□□□ 0.66
SYNCRIP-202ENST00000369622 USP44Q9H0E7 712 aa19.16■□□□□ 0.66
SYNCRIP-202ENST00000369622 IBTKQ9P2D0 1353 aaPredicted RBP19.16■□□□□ 0.66
SYNCRIP-202ENST00000369622 TMEM2Q9UHN6 1383 aa19.15■□□□□ 0.66
SYNCRIP-202ENST00000369622 PPP1R42Q7Z4L9 355 aa19.15■□□□□ 0.66
SYNCRIP-202ENST00000369622 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
SYNCRIP-202ENST00000369622 MCM2P49736 904 aa19.15■□□□□ 0.66
SYNCRIP-202ENST00000369622 ABTB2Q8N961 1025 aa19.15■□□□□ 0.66
SYNCRIP-202ENST00000369622 EID1Q9Y6B2 187 aa19.15■□□□□ 0.66
SYNCRIP-202ENST00000369622 FLT4P35916 1363 aa19.15■□□□□ 0.66
SYNCRIP-202ENST00000369622 OVOS2A0A0J9YW53 1432 aa19.14■□□□□ 0.65
SYNCRIP-202ENST00000369622 OVOS2Q6IE36 1432 aa19.14■□□□□ 0.65
SYNCRIP-202ENST00000369622 GADD45BO75293 160 aaPredicted RBP19.14■□□□□ 0.65
SYNCRIP-202ENST00000369622 REREQ9P2R6 1566 aa19.14■□□□□ 0.65
SYNCRIP-202ENST00000369622 BRD1O95696 1058 aa19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 TAF7Q15545 349 aaPredicted RBP19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 CWC27Q6UX04 472 aaKnown RBP19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 SPATA31D1Q6ZQQ2 1576 aa19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 PIBF1Q8WXW3 757 aa19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 DDX54Q8TDD1 881 aaKnown RBP19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 RBM33Q96EV2 1170 aaKnown RBP19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 SPG7Q9UQ90 795 aa19.13■□□□□ 0.65
SYNCRIP-202ENST00000369622 MBD3O95983 291 aa19.12■□□□□ 0.65
SYNCRIP-202ENST00000369622 CPA1P15085 419 aa19.12■□□□□ 0.65
SYNCRIP-202ENST00000369622 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
SYNCRIP-202ENST00000369622 CAPN2P17655 700 aa19.11■□□□□ 0.65
SYNCRIP-202ENST00000369622 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
SYNCRIP-202ENST00000369622 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
SYNCRIP-202ENST00000369622 SRCIN1Q9C0H9 1055 aa19.11■□□□□ 0.65
SYNCRIP-202ENST00000369622 SBNO1A3KN83 1393 aa19.11■□□□□ 0.65
SYNCRIP-202ENST00000369622 SALL3Q9BXA9 1300 aa19.1■□□□□ 0.65
SYNCRIP-202ENST00000369622 USP48Q86UV5 1035 aa19.1■□□□□ 0.65
SYNCRIP-202ENST00000369622 IGSF1Q8N6C5 1336 aa19.1■□□□□ 0.65
SYNCRIP-202ENST00000369622 SLFN14P0C7P3 912 aa19.1■□□□□ 0.65
SYNCRIP-202ENST00000369622 GTF2F1P35269 517 aaKnown RBP eCLIP19.1■□□□□ 0.651e-7■■■■■ 43.2
SYNCRIP-202ENST00000369622 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
SYNCRIP-202ENST00000369622 C3P01024 1663 aa19.1■□□□□ 0.65
SYNCRIP-202ENST00000369622 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
SYNCRIP-202ENST00000369622 SETD1AO15047 1707 aaKnown RBP19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 HOXC9P31274 260 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 DHX37Q8IY37 1157 aaKnown RBP19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 TSPY26PQ9H489 355 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 CUL4AQ13619 759 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 TIGD1Q96MW7 591 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 ITSN1Q15811 1721 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 MON2Q7Z3U7 1717 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 PI4KAP2A4QPH2 592 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 PI4KAP1Q8N8J0 262 aa19.09■□□□□ 0.65
SYNCRIP-202ENST00000369622 SOS1Q07889 1333 aaPredicted RBP19.08■□□□□ 0.65
SYNCRIP-202ENST00000369622 TTC21AQ8NDW8 1320 aa19.08■□□□□ 0.65
SYNCRIP-202ENST00000369622 ANAPC15P60006 121 aa19.08■□□□□ 0.65
SYNCRIP-202ENST00000369622 SYAP1Q96A49 352 aaPredicted RBP19.08■□□□□ 0.65
SYNCRIP-202ENST00000369622 TMX1Q9H3N1 280 aa19.08■□□□□ 0.65
SYNCRIP-202ENST00000369622 TECPR2O15040 1411 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms