RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 CAMSAP1Q5T5Y3 1602 aa17.15■□□□□ 0.34
PHTF1-204ENST00000369604 CD163L1Q9NR16 1453 aa17.15■□□□□ 0.34
PHTF1-204ENST00000369604 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
PHTF1-204ENST00000369604 PNMA6EA0A0J9YXQ4 647 aa17.15■□□□□ 0.34
PHTF1-204ENST00000369604 NUP62CLQ9H1M0 184 aa17.15■□□□□ 0.34
PHTF1-204ENST00000369604 FERMT3Q86UX7 667 aa17.15■□□□□ 0.34
PHTF1-204ENST00000369604 COG3Q96JB2 828 aa17.15■□□□□ 0.34
PHTF1-204ENST00000369604 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.34
PHTF1-204ENST00000369604 GABPB1Q06547 395 aaPredicted RBP17.14■□□□□ 0.33
PHTF1-204ENST00000369604 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
PHTF1-204ENST00000369604 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
PHTF1-204ENST00000369604 CHL1O00533 1208 aa17.14■□□□□ 0.33
PHTF1-204ENST00000369604 CASTP20810 708 aaKnown RBP17.14■□□□□ 0.33
PHTF1-204ENST00000369604 TYRO3Q06418 890 aa17.14■□□□□ 0.33
PHTF1-204ENST00000369604 RUFY3Q7L099 469 aa17.14■□□□□ 0.33
PHTF1-204ENST00000369604 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.14■□□□□ 0.33
PHTF1-204ENST00000369604 V9GYY5 206 aaPredicted RBP17.14■□□□□ 0.33
PHTF1-204ENST00000369604 KCNJ4P48050 445 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 ABCC3O15438 1527 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 VGLL3A8MV65 326 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
PHTF1-204ENST00000369604 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
PHTF1-204ENST00000369604 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 TNMDQ9H2S6 317 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
PHTF1-204ENST00000369604 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
PHTF1-204ENST00000369604 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
PHTF1-204ENST00000369604 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
PHTF1-204ENST00000369604 DDX41Q9UJV9 622 aaKnown RBP17.12■□□□□ 0.33
PHTF1-204ENST00000369604 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
PHTF1-204ENST00000369604 SSH2Q76I76 1423 aa17.12■□□□□ 0.33
PHTF1-204ENST00000369604 CWC27Q6UX04 472 aaKnown RBP17.12■□□□□ 0.33
PHTF1-204ENST00000369604 PAXBP1Q9Y5B6 917 aa17.12■□□□□ 0.33
PHTF1-204ENST00000369604 TSPYL4Q9UJ04 414 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 MTMR6Q9Y217 621 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 NPHP1O15259 732 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 LARGE1O95461 756 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 GNAI3P08754 354 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 CCDC66A2RUB6 948 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 PDE4CQ08493 712 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
PHTF1-204ENST00000369604 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 TMEM51Q9NW97 253 aa17.11■□□□□ 0.33
PHTF1-204ENST00000369604 LIG1P18858 919 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 KRT85P78386 507 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 CBX8Q9HC52 389 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
PHTF1-204ENST00000369604 MRVI1Q9Y6F6 885 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 SALL3Q9BXA9 1300 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 KRT222Q8N1A0 295 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 CLIP2Q9UDT6 1046 aa17.1■□□□□ 0.33
PHTF1-204ENST00000369604 SOX12O15370 315 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 ATP8B2P98198 1209 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 JAKMIP1Q96N16 626 aaKnown RBP17.09■□□□□ 0.33
PHTF1-204ENST00000369604 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 SLFN14P0C7P3 912 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 LARP1BQ659C4 914 aaKnown RBP17.09■□□□□ 0.33
PHTF1-204ENST00000369604 KIF18AQ8NI77 898 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 PDRG1Q9NUG6 133 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 RAD50Q92878 1312 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
PHTF1-204ENST00000369604 TTC14Q96N46 770 aa17.09■□□□□ 0.33
PHTF1-204ENST00000369604 CPSF1Q10570 1443 aaKnown RBP17.09■□□□□ 0.33
PHTF1-204ENST00000369604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.33
PHTF1-204ENST00000369604 SYCP1Q15431 976 aa17.08■□□□□ 0.33
PHTF1-204ENST00000369604 STAP2Q9UGK3 403 aa17.08■□□□□ 0.33
PHTF1-204ENST00000369604 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.33
PHTF1-204ENST00000369604 ZNF75DP51815 510 aa17.08■□□□□ 0.32
PHTF1-204ENST00000369604 TTC6Q86TZ1 520 aa17.08■□□□□ 0.32
PHTF1-204ENST00000369604 TFIP11Q9UBB9 837 aaKnown RBP17.08■□□□□ 0.32
PHTF1-204ENST00000369604 KIAA0232Q92628 1395 aa17.08■□□□□ 0.32
PHTF1-204ENST00000369604 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
PHTF1-204ENST00000369604 SGSM2O43147 1006 aa17.08■□□□□ 0.32
PHTF1-204ENST00000369604 FBXO31Q5XUX0 539 aaPredicted RBP17.08■□□□□ 0.32
PHTF1-204ENST00000369604 TERF2Q15554 542 aa17.07■□□□□ 0.32
PHTF1-204ENST00000369604 ZNF165P49910 485 aa17.07■□□□□ 0.32
PHTF1-204ENST00000369604 CACTINQ8WUQ7 758 aaKnown RBP17.07■□□□□ 0.32
PHTF1-204ENST00000369604 MORC2Q9Y6X9 1032 aaPredicted RBP17.07■□□□□ 0.32
PHTF1-204ENST00000369604 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
PHTF1-204ENST00000369604 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
PHTF1-204ENST00000369604 ZNF397Q8NF99 534 aaPredicted RBP17.06■□□□□ 0.32
PHTF1-204ENST00000369604 BICD2Q8TD16 824 aa17.06■□□□□ 0.32
PHTF1-204ENST00000369604 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
PHTF1-204ENST00000369604 TRMT1Q9NXH9 659 aaKnown RBP17.06■□□□□ 0.32
PHTF1-204ENST00000369604 GOLGA6L19H0YKK7 550 aa17.06■□□□□ 0.32
PHTF1-204ENST00000369604 PTPN14Q15678 1187 aa17.06■□□□□ 0.32
PHTF1-204ENST00000369604 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
PHTF1-204ENST00000369604 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
PHTF1-204ENST00000369604 CYP46A1Q9Y6A2 500 aa17.06■□□□□ 0.32
PHTF1-204ENST00000369604 ANKRD26Q9UPS8 1709 aa17.05■□□□□ 0.32
PHTF1-204ENST00000369604 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
PHTF1-204ENST00000369604 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
PHTF1-204ENST00000369604 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
PHTF1-204ENST00000369604 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms