RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 CGNQ9P2M7 1197 aaKnown RBP14.76□□□□□ -0.05
PHGDH-201ENST00000369407 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-201ENST00000369407 UBE2HP62256 183 aa14.76□□□□□ -0.05
PHGDH-201ENST00000369407 CWC27Q6UX04 472 aaKnown RBP14.76□□□□□ -0.05
PHGDH-201ENST00000369407 SMC3Q9UQE7 1217 aa14.76□□□□□ -0.05
PHGDH-201ENST00000369407 SNX14Q9Y5W7 946 aa14.76□□□□□ -0.05
PHGDH-201ENST00000369407 VPS37CA5D8V6 355 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-201ENST00000369407 HSPA4P34932 840 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 SPTLC3Q9NUV7 552 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 CPSF1Q10570 1443 aaKnown RBP14.75□□□□□ -0.05
PHGDH-201ENST00000369407 PTGS1P23219 599 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 FERMT3Q86UX7 667 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 KIAA1524Q8TCG1 905 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-201ENST00000369407 CPS1P31327 1500 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 F13A1P00488 732 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 GTF2F1P35269 517 aaKnown RBP eCLIP14.75□□□□□ -0.05
PHGDH-201ENST00000369407 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
PHGDH-201ENST00000369407 KIAA0232Q92628 1395 aa14.75□□□□□ -0.05
PHGDH-201ENST00000369407 NAA30Q147X3 362 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-201ENST00000369407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-201ENST00000369407 ATP8B2P98198 1209 aa14.74□□□□□ -0.05
PHGDH-201ENST00000369407 LRMPQ12912 555 aa14.74□□□□□ -0.05
PHGDH-201ENST00000369407 MTHFSDQ2M296 383 aaKnown RBP14.74□□□□□ -0.05
PHGDH-201ENST00000369407 NECAB1Q8N987 351 aa14.74□□□□□ -0.05
PHGDH-201ENST00000369407 STK31Q9BXU1 1019 aa14.74□□□□□ -0.05
PHGDH-201ENST00000369407 SURF6O75683 361 aaKnown RBP14.73□□□□□ -0.05
PHGDH-201ENST00000369407 CASTP20810 708 aaKnown RBP14.73□□□□□ -0.05
PHGDH-201ENST00000369407 FLIIQ13045 1269 aa14.73□□□□□ -0.05
PHGDH-201ENST00000369407 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
PHGDH-201ENST00000369407 RTF1Q92541 710 aaKnown RBP14.73□□□□□ -0.05
PHGDH-201ENST00000369407 GJB2P29033 226 aa14.73□□□□□ -0.05
PHGDH-201ENST00000369407 LUZP1Q86V48 1076 aa14.73□□□□□ -0.05
PHGDH-201ENST00000369407 CKAP2LQ8IYA6 745 aa14.73□□□□□ -0.05
PHGDH-201ENST00000369407 EDC4Q6P2E9 1401 aaKnown RBP14.73□□□□□ -0.05
PHGDH-201ENST00000369407 FUCA2Q9BTY2 467 aa14.73□□□□□ -0.05
PHGDH-201ENST00000369407 MLH3Q9UHC1 1453 aa14.73□□□□□ -0.05
PHGDH-201ENST00000369407 ALKQ9UM73 1620 aa14.72□□□□□ -0.05
PHGDH-201ENST00000369407 CHAF1AQ13111 956 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-201ENST00000369407 C16orf45Q96MC5 204 aaPredicted RBP14.72□□□□□ -0.05
PHGDH-201ENST00000369407 NRBP1Q9UHY1 535 aa14.72□□□□□ -0.05
PHGDH-201ENST00000369407 TMEM87AQ8NBN3 555 aa14.72□□□□□ -0.05
PHGDH-201ENST00000369407 LIMCH1Q9UPQ0 1083 aa14.72□□□□□ -0.05
PHGDH-201ENST00000369407 UTP14CQ5TAP6 766 aaKnown RBP14.71□□□□□ -0.05
PHGDH-201ENST00000369407 DRC7Q8IY82 874 aa14.71□□□□□ -0.05
PHGDH-201ENST00000369407 COL9A3Q14050 684 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-201ENST00000369407 ADCK5Q3MIX3 580 aa14.71□□□□□ -0.05
PHGDH-201ENST00000369407 TTC14Q96N46 770 aa14.71□□□□□ -0.05
PHGDH-201ENST00000369407 ATP7BP35670 1465 aa14.71□□□□□ -0.05
PHGDH-201ENST00000369407 CCDC61Q9Y6R9 512 aa14.71□□□□□ -0.06
PHGDH-201ENST00000369407 CLTCQ00610 1675 aaKnown RBP14.7□□□□□ -0.06
PHGDH-201ENST00000369407 STAP2Q9UGK3 403 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 CRB1P82279 1406 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 SGSM2O43147 1006 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 LETM1O95202 739 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-201ENST00000369407 GNAI3P08754 354 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 LIG1P18858 919 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 CCDC186Q7Z3E2 898 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 TCEANC2Q96MN5 208 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 MTMR6Q9Y217 621 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 MAP3K19Q56UN5 1328 aa14.7□□□□□ -0.06
PHGDH-201ENST00000369407 UBTFL1P0CB47 393 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-201ENST00000369407 PPP1R42Q7Z4L9 355 aa14.69□□□□□ -0.06
PHGDH-201ENST00000369407 JAKMIP1Q96N16 626 aaKnown RBP14.69□□□□□ -0.06
PHGDH-201ENST00000369407 LSG1Q9H089 658 aaKnown RBP14.69□□□□□ -0.06
PHGDH-201ENST00000369407 USP44Q9H0E7 712 aa14.69□□□□□ -0.06
PHGDH-201ENST00000369407 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-201ENST00000369407 RAD50Q92878 1312 aa14.69□□□□□ -0.06
PHGDH-201ENST00000369407 PTH1RQ03431 593 aa14.69□□□□□ -0.06
PHGDH-201ENST00000369407 PRPF40BQ6NWY9 871 aaKnown RBP14.69□□□□□ -0.06
PHGDH-201ENST00000369407 DIAPH3Q9NSV4 1193 aa14.69□□□□□ -0.06
PHGDH-201ENST00000369407 PHAXQ9H814 394 aaKnown RBP14.69□□□□□ -0.06
PHGDH-201ENST00000369407 TFIP11Q9UBB9 837 aaKnown RBP14.69□□□□□ -0.06
PHGDH-201ENST00000369407 MLECQ14165 292 aa14.68□□□□□ -0.06
PHGDH-201ENST00000369407 ZNF771Q7L3S4 317 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-201ENST00000369407 PI4K2BQ8TCG2 481 aa14.68□□□□□ -0.06
PHGDH-201ENST00000369407 PRR36Q9H6K5 1346 aa14.68□□□□□ -0.06
PHGDH-201ENST00000369407 ZNF592Q92610 1267 aa14.68□□□□□ -0.06
PHGDH-201ENST00000369407 CCDC192P0DO97 292 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 TTC6Q86TZ1 520 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 HYPKQ9NX55 129 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 SRGAP3O43295 1099 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 TMEM131LA2VDJ0 1609 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 ST3GAL1Q11201 340 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 CERS3Q8IU89 383 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 PDRG1Q9NUG6 133 aa14.67□□□□□ -0.06
PHGDH-201ENST00000369407 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-201ENST00000369407 SSH2Q76I76 1423 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 NCBP1Q09161 790 aaKnown RBP14.66□□□□□ -0.06
PHGDH-201ENST00000369407 ANKRD7Q92527 254 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 GTPBP4Q9BZE4 634 aaKnown RBP14.66□□□□□ -0.06
PHGDH-201ENST00000369407 ME3Q16798 604 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 CDC37L1Q7L3B6 337 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 TMEM51Q9NW97 253 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 ATP6V1DQ9Y5K8 247 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 MRVI1Q9Y6F6 885 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 METP08581 1390 aa14.66□□□□□ -0.06
PHGDH-201ENST00000369407 EIF2S2P20042 333 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms