RNA–Protein interactions for RNA: ENST00000369130.7

VPS45-202, Transcript of vacuolar protein sorting 45 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS45, Length 2,790 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-202ENST00000369130 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
VPS45-202ENST00000369130 NEO1Q92859 1461 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 CAMK4Q16566 473 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 SNX14Q9Y5W7 946 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 PEAK1Q9H792 1746 aa11.86□□□□□ -0.51
VPS45-202ENST00000369130 PTH1RQ03431 593 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 DNM1Q05193 864 aaKnown RBP11.85□□□□□ -0.51
VPS45-202ENST00000369130 RUFY3Q7L099 469 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 PDCL3Q9H2J4 239 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 ADCY5O95622 1261 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 GNAI3P08754 354 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 SYT1P21579 422 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 CUL4AQ13619 759 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 CCDC39Q9UFE4 941 aa11.85□□□□□ -0.51
VPS45-202ENST00000369130 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.85□□□□□ -0.51
VPS45-202ENST00000369130 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
VPS45-202ENST00000369130 PRAMEF22A3QJZ6 481 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 MBD3O95983 291 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 HAP1P54257 671 aaPredicted RBP11.84□□□□□ -0.51
VPS45-202ENST00000369130 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
VPS45-202ENST00000369130 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 KIF24Q5T7B8 1368 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 ZNF500O60304 480 aaPredicted RBP11.84□□□□□ -0.51
VPS45-202ENST00000369130 NDUFB9Q9Y6M9 179 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 AP5Z1O43299 807 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 FOSBP53539 338 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 STK3Q13188 491 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 SIL1Q9H173 461 aa11.84□□□□□ -0.51
VPS45-202ENST00000369130 RPAP1Q9BWH6 1393 aaPredicted RBP11.83□□□□□ -0.52
VPS45-202ENST00000369130 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
VPS45-202ENST00000369130 KLHDC4Q8TBB5 520 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 JAKMIP1Q96N16 626 aaKnown RBP11.83□□□□□ -0.52
VPS45-202ENST00000369130 CHGBP05060 677 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 HSPA4P34932 840 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
VPS45-202ENST00000369130 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 ABTB2Q8N961 1025 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 PI4K2BQ8TCG2 481 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 AMOTL2Q9Y2J4 779 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
VPS45-202ENST00000369130 WDR33Q9C0J8 1336 aaKnown RBP11.82□□□□□ -0.52
VPS45-202ENST00000369130 STX6O43752 255 aa11.82□□□□□ -0.52
VPS45-202ENST00000369130 GJB2P29033 226 aa11.82□□□□□ -0.52
VPS45-202ENST00000369130 KCNJ4P48050 445 aa11.82□□□□□ -0.52
VPS45-202ENST00000369130 LRRC59Q96AG4 307 aaKnown RBP11.82□□□□□ -0.52
VPS45-202ENST00000369130 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
VPS45-202ENST00000369130 TAOK2Q9UL54 1235 aa11.82□□□□□ -0.52
VPS45-202ENST00000369130 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
VPS45-202ENST00000369130 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 CKAP2LQ8IYA6 745 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
VPS45-202ENST00000369130 CCDC8Q9H0W5 538 aaPredicted RBP11.81□□□□□ -0.52
VPS45-202ENST00000369130 USP6P35125 1406 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 SGSM2O43147 1006 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 ZSCAN22P10073 491 aaPredicted RBP11.81□□□□□ -0.52
VPS45-202ENST00000369130 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 LMOD2Q6P5Q4 547 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 FAM227BQ96M60 508 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 NRXN3Q9Y4C0 1643 aa11.81□□□□□ -0.52
VPS45-202ENST00000369130 LSG1Q9H089 658 aaKnown RBP11.8□□□□□ -0.52
VPS45-202ENST00000369130 DIAPH3Q9NSV4 1193 aa11.8□□□□□ -0.52
VPS45-202ENST00000369130 C3P01024 1663 aa11.8□□□□□ -0.52
VPS45-202ENST00000369130 MCM2P49736 904 aa11.8□□□□□ -0.52
VPS45-202ENST00000369130 SYAP1Q96A49 352 aaPredicted RBP11.8□□□□□ -0.52
VPS45-202ENST00000369130 A0A087WWV3 80 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 OVOS2A0A0J9YW53 1432 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 ITSN1Q15811 1721 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 OVOS2Q6IE36 1432 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 SETD1AO15047 1707 aaKnown RBP11.79□□□□□ -0.52
VPS45-202ENST00000369130 HOXC9P31274 260 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 CEBPZQ03701 1054 aaKnown RBP11.79□□□□□ -0.52
VPS45-202ENST00000369130 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
VPS45-202ENST00000369130 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 LIMCH1Q9UPQ0 1083 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 IGSF3O75054 1194 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 F13A1P00488 732 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 NOLC1Q14978 699 aaKnown RBP eCLIP11.79□□□□□ -0.52
VPS45-202ENST00000369130 HS1BP3Q53T59 392 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 DDX11Q96FC9 970 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 INTS4Q96HW7 963 aaKnown RBP11.79□□□□□ -0.52
VPS45-202ENST00000369130 PYCARDQ9ULZ3 195 aa11.79□□□□□ -0.52
VPS45-202ENST00000369130 RAD50Q92878 1312 aa11.78□□□□□ -0.52
VPS45-202ENST00000369130 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.78□□□□□ -0.52
VPS45-202ENST00000369130 ME3Q16798 604 aa11.78□□□□□ -0.52
VPS45-202ENST00000369130 SASS6Q6UVJ0 657 aa11.78□□□□□ -0.52
VPS45-202ENST00000369130 PDRG1Q9NUG6 133 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms