RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 KRT85P78386 507 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
PRDM1-201ENST00000369089 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 SLFN14P0C7P3 912 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
PRDM1-201ENST00000369089 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 HDXQ7Z353 690 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
PRDM1-201ENST00000369089 ZNHIT6Q9NWK9 470 aaKnown RBP12.11□□□□□ -0.47
PRDM1-201ENST00000369089 CYP2C19P33261 490 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 FAM200AQ8TCP9 573 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
PRDM1-201ENST00000369089 CBFA2T2O43439 604 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 FAM114A1Q8IWE2 563 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 DNAI1Q9UI46 699 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 ADAMTS8Q9UP79 889 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 CAVIN2O95810 425 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 IGHDP01880 384 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 MX1P20591 662 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 ARHGAP25P42331 645 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 JPH2Q9BR39 696 aaPredicted RBP12.1□□□□□ -0.47
PRDM1-201ENST00000369089 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 LIG3P49916 1009 aa12.1□□□□□ -0.47
PRDM1-201ENST00000369089 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
PRDM1-201ENST00000369089 ATP8B1O43520 1251 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
PRDM1-201ENST00000369089 CEP85LQ5SZL2 805 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 EXOC4Q96A65 974 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 FAM210AQ96ND0 272 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 PDCP20941 246 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 CCDC121Q6ZUS5 278 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 GOLGA1Q92805 767 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 IQCEQ6IPM2 695 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 TCHPQ9BT92 498 aa12.09□□□□□ -0.47
PRDM1-201ENST00000369089 UBE2HP62256 183 aa12.08□□□□□ -0.47
PRDM1-201ENST00000369089 RILPL2Q969X0 211 aa12.08□□□□□ -0.47
PRDM1-201ENST00000369089 CARD10Q9BWT7 1032 aa12.08□□□□□ -0.47
PRDM1-201ENST00000369089 SRGAP3O43295 1099 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 PHACTR2O75167 634 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 EGFL6Q8IUX8 553 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 AFAP1L1Q8TED9 768 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 DHX29Q7Z478 1369 aaKnown RBP12.08□□□□□ -0.48
PRDM1-201ENST00000369089 TUBB4BP68371 445 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 AKAP17AQ02040 695 aaKnown RBP12.08□□□□□ -0.48
PRDM1-201ENST00000369089 PSMD2Q13200 908 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 LRRC23Q53EV4 343 aaPredicted RBP12.08□□□□□ -0.48
PRDM1-201ENST00000369089 HOOK1Q9UJC3 728 aaKnown RBP12.08□□□□□ -0.48
PRDM1-201ENST00000369089 ARHGEF11O15085 1522 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 AMPHP49418 695 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 MMP14P50281 582 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 GCC1Q96CN9 775 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 CABS1Q96KC9 395 aa12.08□□□□□ -0.48
PRDM1-201ENST00000369089 SERPINC1P01008 464 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 SRLQ86TD4 932 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 UPF3BQ9BZI7 483 aaKnown RBP12.07□□□□□ -0.48
PRDM1-201ENST00000369089 TUBBP07437 444 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 EVCP57679 992 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 PDCD2Q16342 344 aaPredicted RBP12.07□□□□□ -0.48
PRDM1-201ENST00000369089 FAM43BQ6ZT52 329 aaPredicted RBP12.07□□□□□ -0.48
PRDM1-201ENST00000369089 CAPN7Q9Y6W3 813 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 ABCC5O15440 1437 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 EIF3CLB5ME19 914 aaKnown RBP12.07□□□□□ -0.48
PRDM1-201ENST00000369089 TRIM66O15016 1216 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 CEP89Q96ST8 783 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 EIF3CQ99613 913 aaKnown RBP12.07□□□□□ -0.48
PRDM1-201ENST00000369089 KIF4BQ2VIQ3 1234 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 COG3Q96JB2 828 aa12.07□□□□□ -0.48
PRDM1-201ENST00000369089 ZNF165P49910 485 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 NEXNQ0ZGT2 675 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 TADA2BQ86TJ2 420 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 CHD1LQ86WJ1 897 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 SAAL1Q96ER3 474 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 PDLIM2Q96JY6 352 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
PRDM1-201ENST00000369089 MRFAP1Q9Y605 127 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 CAMK4Q16566 473 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 WHAMMP3Q1A5X7 153 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 MUM1L1Q5H9M0 696 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 ODF2Q5BJF6 829 aa12.06□□□□□ -0.48
PRDM1-201ENST00000369089 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
PRDM1-201ENST00000369089 KIF5CO60282 957 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 SMARCE1Q969G3 411 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 LMBRD1Q9NUN5 540 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 ELP1O95163 1332 aa12.05□□□□□ -0.48
PRDM1-201ENST00000369089 LRPPRCP42704 1394 aaKnown RBP12.05□□□□□ -0.48
PRDM1-201ENST00000369089 CTAGE5O15320 804 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms