RNA–Protein interactions for RNA: ENST00000369060.8

FGFR2-212, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best) BASIC

Gene FGFR2, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-212ENST00000369060 SLIT3O75094 1523 aa16.28■□□□□ 0.2
FGFR2-212ENST00000369060 STRCP1A6NGW2 1772 aa16.28■□□□□ 0.2
FGFR2-212ENST00000369060 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
FGFR2-212ENST00000369060 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
FGFR2-212ENST00000369060 CYP27B1O15528 508 aa16.28■□□□□ 0.2
FGFR2-212ENST00000369060 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
FGFR2-212ENST00000369060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.28■□□□□ 0.2
FGFR2-212ENST00000369060 TATP17735 454 aaPredicted RBP16.27■□□□□ 0.2
FGFR2-212ENST00000369060 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
FGFR2-212ENST00000369060 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
FGFR2-212ENST00000369060 RHPN1Q8TCX5 695 aa16.27■□□□□ 0.19
FGFR2-212ENST00000369060 TRPM3Q9HCF6 1732 aaPredicted RBP16.27■□□□□ 0.19
FGFR2-212ENST00000369060 MEGF6O75095 1541 aa16.27■□□□□ 0.19
FGFR2-212ENST00000369060 PHKG2P15735 406 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
FGFR2-212ENST00000369060 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 ANO2Q9NQ90 1003 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 ERC2O15083 957 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 PDIA6Q15084 440 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 OSBPL3Q9H4L5 887 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 AK9Q5TCS8 1911 aa16.26■□□□□ 0.19
FGFR2-212ENST00000369060 SSFA2P28290 1259 aa16.25■□□□□ 0.19
FGFR2-212ENST00000369060 CADPS2Q86UW7 1296 aa16.25■□□□□ 0.19
FGFR2-212ENST00000369060 DDIT3P35638 169 aa16.25■□□□□ 0.19
FGFR2-212ENST00000369060 PKP1Q13835 747 aa16.25■□□□□ 0.19
FGFR2-212ENST00000369060 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
FGFR2-212ENST00000369060 SIL1Q9H173 461 aa16.25■□□□□ 0.19
FGFR2-212ENST00000369060 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
FGFR2-212ENST00000369060 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
FGFR2-212ENST00000369060 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 ZNF335Q9H4Z2 1342 aaPredicted RBP16.24■□□□□ 0.19
FGFR2-212ENST00000369060 DTNBO60941 627 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 HOXB7P09629 217 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 POLA2Q14181 598 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 ZGPATQ8N5A5 531 aaKnown RBP16.24■□□□□ 0.19
FGFR2-212ENST00000369060 XAGE3Q8WTP9 111 aa16.24■□□□□ 0.19
FGFR2-212ENST00000369060 CHMLP26374 656 aa16.23■□□□□ 0.19
FGFR2-212ENST00000369060 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
FGFR2-212ENST00000369060 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
FGFR2-212ENST00000369060 SUCLG2Q96I99 432 aa16.23■□□□□ 0.19
FGFR2-212ENST00000369060 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
FGFR2-212ENST00000369060 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
FGFR2-212ENST00000369060 KAZALD1Q96I82 304 aa16.23■□□□□ 0.19
FGFR2-212ENST00000369060 STRN4Q9NRL3 753 aa16.23■□□□□ 0.19
FGFR2-212ENST00000369060 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 UPF3BQ9BZI7 483 aaKnown RBP16.22■□□□□ 0.19
FGFR2-212ENST00000369060 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 LMO7Q8WWI1 1683 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 IGKV5-2P06315 115 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
FGFR2-212ENST00000369060 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
FGFR2-212ENST00000369060 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
FGFR2-212ENST00000369060 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
FGFR2-212ENST00000369060 REC8O95072 547 aa16.21■□□□□ 0.19
FGFR2-212ENST00000369060 RABEP1Q15276 862 aa16.21■□□□□ 0.19
FGFR2-212ENST00000369060 MYD88Q99836 296 aa16.21■□□□□ 0.19
FGFR2-212ENST00000369060 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
FGFR2-212ENST00000369060 TRAK2O60296 914 aa16.21■□□□□ 0.19
FGFR2-212ENST00000369060 NEK4P51957 841 aa16.21■□□□□ 0.19
FGFR2-212ENST00000369060 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
FGFR2-212ENST00000369060 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
FGFR2-212ENST00000369060 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.18
FGFR2-212ENST00000369060 PI4K2BQ8TCG2 481 aa16.21■□□□□ 0.18
FGFR2-212ENST00000369060 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.18
FGFR2-212ENST00000369060 HEG1Q9ULI3 1381 aa16.2■□□□□ 0.18
FGFR2-212ENST00000369060 EPHA10Q5JZY3 1008 aa16.2■□□□□ 0.18
FGFR2-212ENST00000369060 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
FGFR2-212ENST00000369060 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
FGFR2-212ENST00000369060 CABP4P57796 275 aa16.19■□□□□ 0.18
FGFR2-212ENST00000369060 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
FGFR2-212ENST00000369060 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
FGFR2-212ENST00000369060 STAP2Q9UGK3 403 aa16.19■□□□□ 0.18
FGFR2-212ENST00000369060 ALS2Q96Q42 1657 aa16.19■□□□□ 0.18
FGFR2-212ENST00000369060 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
FGFR2-212ENST00000369060 GRM8O00222 908 aa16.19■□□□□ 0.18
FGFR2-212ENST00000369060 CWC27Q6UX04 472 aaKnown RBP16.19■□□□□ 0.18
FGFR2-212ENST00000369060 CCDC9Q9Y3X0 531 aaKnown RBP16.18■□□□□ 0.18
FGFR2-212ENST00000369060 PXDNLA1KZ92 1463 aa16.18■□□□□ 0.18
FGFR2-212ENST00000369060 TNS3Q68CZ2 1445 aa16.18■□□□□ 0.18
FGFR2-212ENST00000369060 RAB3GAP1Q15042 981 aa16.18■□□□□ 0.18
FGFR2-212ENST00000369060 TLR7Q9NYK1 1049 aaKnown RBP16.18■□□□□ 0.18
FGFR2-212ENST00000369060 LINS1Q8NG48 757 aa16.17■□□□□ 0.18
FGFR2-212ENST00000369060 SLAIN2Q9P270 581 aa16.17■□□□□ 0.18
FGFR2-212ENST00000369060 RAB11FIP3O75154 756 aa16.16■□□□□ 0.18
FGFR2-212ENST00000369060 KAT6BQ8WYB5 2073 aa16.16■□□□□ 0.18
FGFR2-212ENST00000369060 AACSQ86V21 672 aa16.16■□□□□ 0.18
FGFR2-212ENST00000369060 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
FGFR2-212ENST00000369060 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
FGFR2-212ENST00000369060 NDUFB9Q9Y6M9 179 aa16.15■□□□□ 0.18
FGFR2-212ENST00000369060 SASH1O94885 1247 aa16.15■□□□□ 0.18
FGFR2-212ENST00000369060 DDX58O95786 925 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms