RNA–Protein interactions for RNA: ENST00000369042.5

BEND3-201, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEND3, Length 6,200 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-201ENST00000369042 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
BEND3-201ENST00000369042 CCDC91Q7Z6B0 441 aa13.14□□□□□ -0.31
BEND3-201ENST00000369042 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
BEND3-201ENST00000369042 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
BEND3-201ENST00000369042 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
BEND3-201ENST00000369042 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
BEND3-201ENST00000369042 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
BEND3-201ENST00000369042 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
BEND3-201ENST00000369042 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
BEND3-201ENST00000369042 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
BEND3-201ENST00000369042 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
BEND3-201ENST00000369042 NAPBQ9H115 298 aa13.13□□□□□ -0.31
BEND3-201ENST00000369042 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
BEND3-201ENST00000369042 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
BEND3-201ENST00000369042 GSTTP1A0A1W2PQM5 241 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
BEND3-201ENST00000369042 LIG1P18858 919 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 SLC12A7Q9Y666 1083 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
BEND3-201ENST00000369042 DESP17661 470 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
BEND3-201ENST00000369042 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
BEND3-201ENST00000369042 TAF7Q15545 349 aaPredicted RBP13.12□□□□□ -0.31
BEND3-201ENST00000369042 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
BEND3-201ENST00000369042 RBM25P49756 843 aaKnown RBP13.12□□□□□ -0.31
BEND3-201ENST00000369042 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
BEND3-201ENST00000369042 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 YEATS4O95619 227 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 PLEKHH1Q9ULM0 1364 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 ZNF213O14771 459 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 CHMP4BP1P59074 171 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
BEND3-201ENST00000369042 ZBTB9Q96C00 473 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 AKAP2Q9Y2D5 859 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
BEND3-201ENST00000369042 LMAN1P49257 510 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 ZSCAN23Q3MJ62 389 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
BEND3-201ENST00000369042 MCM3P25205 808 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 HLTFQ14527 1009 aaKnown RBP eCLIP13.1□□□□□ -0.31
BEND3-201ENST00000369042 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 IGHDP01880 384 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 ANAPC15P60006 121 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 STX1AQ16623 288 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 CEP135Q66GS9 1140 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 USO1O60763 962 aaKnown RBP13.1□□□□□ -0.31
BEND3-201ENST00000369042 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
BEND3-201ENST00000369042 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 PRG4Q92954 1404 aaPredicted RBP13.1□□□□□ -0.31
BEND3-201ENST00000369042 CTAGE5O15320 804 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 STX6O43752 255 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 NLRP5P59047 1200 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 GIMAP6Q6P9H5 292 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
BEND3-201ENST00000369042 SYNJ2O15056 1496 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 TRIM27P14373 513 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 CETN2P41208 172 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 SMARCC1Q92922 1105 aaPredicted RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 TMCO5BA8MYB1 307 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 IFIT3O14879 490 aaKnown RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 MTIF2P46199 727 aaKnown RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 TRMT1LQ7Z2T5 733 aaKnown RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 FAM107BQ9H098 131 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 DDX19AQ9NUU7 478 aaKnown RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
BEND3-201ENST00000369042 CTCFLQ8NI51 663 aaPredicted RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 SRRTQ9BXP5 876 aaKnown RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
BEND3-201ENST00000369042 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.31
BEND3-201ENST00000369042 SPECC1Q5M775 1068 aa13.08□□□□□ -0.31
BEND3-201ENST00000369042 DAPK1P53355 1430 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
BEND3-201ENST00000369042 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 VPS36Q86VN1 386 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 HCLS1P14317 486 aaPredicted RBP13.08□□□□□ -0.32
BEND3-201ENST00000369042 HAND2P61296 217 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.32
BEND3-201ENST00000369042 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
BEND3-201ENST00000369042 MYZAPP0CAP1 466 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 HSP90AA4PQ58FG1 418 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 CAVIN4Q5BKX8 364 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
BEND3-201ENST00000369042 ATP2C2O75185 946 aa13.08□□□□□ -0.32
BEND3-201ENST00000369042 CCDC196A0A1B0GTZ2 297 aa13.07□□□□□ -0.32
BEND3-201ENST00000369042 NF2P35240 595 aa13.07□□□□□ -0.32
BEND3-201ENST00000369042 GSDMDP57764 484 aa13.07□□□□□ -0.32
BEND3-201ENST00000369042 CCDC12Q8WUD4 166 aaPredicted RBP13.07□□□□□ -0.32
BEND3-201ENST00000369042 STARD3NLO95772 234 aa13.07□□□□□ -0.32
BEND3-201ENST00000369042 MICALCLQ6ZW33 695 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms