RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 ZKSCAN5Q9Y2L8 839 aa18.65■□□□□ 0.58
SEMA6C-202ENST00000368912 KIF3AQ9Y496 699 aa18.65■□□□□ 0.58
SEMA6C-202ENST00000368912 CABP4P57796 275 aa18.65■□□□□ 0.58
SEMA6C-202ENST00000368912 FAM182BQ5T319 152 aa18.65■□□□□ 0.58
SEMA6C-202ENST00000368912 RGPD8O14715 1765 aaPredicted RBP18.65■□□□□ 0.58
SEMA6C-202ENST00000368912 USP19O94966 1318 aa18.65■□□□□ 0.58
SEMA6C-202ENST00000368912 PRAMEF22A3QJZ6 481 aa18.64■□□□□ 0.58
SEMA6C-202ENST00000368912 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.57
SEMA6C-202ENST00000368912 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
SEMA6C-202ENST00000368912 KDM2BQ8NHM5 1336 aa18.64■□□□□ 0.57
SEMA6C-202ENST00000368912 CCDC27Q2M243 656 aa18.64■□□□□ 0.57
SEMA6C-202ENST00000368912 OVOS2A0A0J9YW53 1432 aa18.63■□□□□ 0.57
SEMA6C-202ENST00000368912 OVOS2Q6IE36 1432 aa18.63■□□□□ 0.57
SEMA6C-202ENST00000368912 MYRIPQ8NFW9 859 aa18.63■□□□□ 0.57
SEMA6C-202ENST00000368912 PNPLA6Q8IY17 1366 aa18.63■□□□□ 0.57
SEMA6C-202ENST00000368912 ANKARQ7Z5J8 1434 aa18.63■□□□□ 0.57
SEMA6C-202ENST00000368912 IGHDP01880 384 aa18.63■□□□□ 0.57
SEMA6C-202ENST00000368912 INSRP06213 1382 aa18.62■□□□□ 0.57
SEMA6C-202ENST00000368912 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
SEMA6C-202ENST00000368912 IGSF1Q8N6C5 1336 aa18.62■□□□□ 0.57
SEMA6C-202ENST00000368912 HMGN5P82970 282 aaKnown RBP18.61■□□□□ 0.57
SEMA6C-202ENST00000368912 MAP2P11137 1827 aaKnown RBP18.61■□□□□ 0.57
SEMA6C-202ENST00000368912 LOC102724159A0A0B4J2E5 919 aa18.61■□□□□ 0.57
SEMA6C-202ENST00000368912 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
SEMA6C-202ENST00000368912 KIAA2012Q0VF49 1180 aa18.61■□□□□ 0.57
SEMA6C-202ENST00000368912 PWP2Q15269 919 aaKnown RBP18.61■□□□□ 0.57
SEMA6C-202ENST00000368912 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
SEMA6C-202ENST00000368912 LNPKQ9C0E8 428 aa18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 ERBB3P21860 1342 aa18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 MFAP1P55081 439 aaKnown RBP18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 TRMT2AQ8IZ69 625 aaKnown RBP18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 ZNF710Q8N1W2 664 aa18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 TMX1Q9H3N1 280 aa18.6■□□□□ 0.57
SEMA6C-202ENST00000368912 CCDC39Q9UFE4 941 aa18.59■□□□□ 0.57
SEMA6C-202ENST00000368912 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
SEMA6C-202ENST00000368912 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
SEMA6C-202ENST00000368912 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
SEMA6C-202ENST00000368912 ANKRD45Q5TZF3 282 aa18.58■□□□□ 0.57
SEMA6C-202ENST00000368912 LRRC7Q96NW7 1537 aa18.58■□□□□ 0.56
SEMA6C-202ENST00000368912 MST1RQ04912 1400 aa18.57■□□□□ 0.56
SEMA6C-202ENST00000368912 HS1BP3Q53T59 392 aa18.57■□□□□ 0.56
SEMA6C-202ENST00000368912 CHPF2Q9P2E5 772 aa18.57■□□□□ 0.56
SEMA6C-202ENST00000368912 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
SEMA6C-202ENST00000368912 CALCOCO1Q9P1Z2 691 aa18.57■□□□□ 0.56
SEMA6C-202ENST00000368912 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
SEMA6C-202ENST00000368912 EP400NLQ6ZTU2 488 aa18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 RWDD1Q9H446 243 aaPredicted RBP18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 CDK12Q9NYV4 1490 aaPredicted RBP18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 USP31Q70CQ4 1352 aa18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 DDX19BQ9UMR2 479 aa18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 CHL1O00533 1208 aa18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 CCDC30Q5VVM6 783 aa18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
SEMA6C-202ENST00000368912 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 AMOTQ4VCS5 1084 aa18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 SETD1AO15047 1707 aaKnown RBP18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 OS9Q13438 667 aaPredicted RBP18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 CAVIN1Q6NZI2 390 aaKnown RBP18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
SEMA6C-202ENST00000368912 AKAP4Q5JQC9 854 aa18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 PRR29P0C7W0 189 aa18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 ZNF622Q969S3 477 aaKnown RBP eCLIP18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 API5Q9BZZ5 524 aaKnown RBP18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 GPATCH11Q8N954 259 aa18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 RNF214Q8ND24 703 aa18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 BANK1Q8NDB2 785 aa18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 TBC1D32Q96NH3 1257 aa18.54■□□□□ 0.56
SEMA6C-202ENST00000368912 GTF2A1P52655 376 aaPredicted RBP18.53■□□□□ 0.56
SEMA6C-202ENST00000368912 KCNQ4P56696 695 aa18.53■□□□□ 0.56
SEMA6C-202ENST00000368912 AXDND1Q5T1B0 1012 aaPredicted RBP18.53■□□□□ 0.56
SEMA6C-202ENST00000368912 RIC3Q7Z5B4 369 aa18.53■□□□□ 0.56
SEMA6C-202ENST00000368912 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
SEMA6C-202ENST00000368912 IL2RBP14784 551 aa18.52■□□□□ 0.56
SEMA6C-202ENST00000368912 PRIMPOLQ96LW4 560 aa18.52■□□□□ 0.56
SEMA6C-202ENST00000368912 CCDC85AQ96PX6 553 aaPredicted RBP18.52■□□□□ 0.56
SEMA6C-202ENST00000368912 MCM5P33992 734 aa18.52■□□□□ 0.56
SEMA6C-202ENST00000368912 FAM98CQ17RN3 349 aaKnown RBP18.52■□□□□ 0.56
SEMA6C-202ENST00000368912 TSPYL1Q9H0U9 437 aa18.52■□□□□ 0.56
SEMA6C-202ENST00000368912 FLIIQ13045 1269 aa18.52■□□□□ 0.55
SEMA6C-202ENST00000368912 TMED8Q6PL24 325 aaPredicted RBP18.52■□□□□ 0.55
SEMA6C-202ENST00000368912 MEIS3Q99687 375 aa18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 IL16Q14005 1332 aa18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 SSH2Q76I76 1423 aa18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 PI4KAP2A4QPH2 592 aa18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 PI4KAP1Q8N8J0 262 aa18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
SEMA6C-202ENST00000368912 EXOC5O00471 708 aa18.5■□□□□ 0.55
SEMA6C-202ENST00000368912 CYP27B1O15528 508 aa18.5■□□□□ 0.55
SEMA6C-202ENST00000368912 SLC20A2Q08357 652 aa18.5■□□□□ 0.55
SEMA6C-202ENST00000368912 ITSN1Q15811 1721 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms