RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.45
SCNM1-202ENST00000368905 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
SCNM1-202ENST00000368905 RIMS1Q86UR5 1692 aaKnown RBP12.21□□□□□ -0.45
SCNM1-202ENST00000368905 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.46
SCNM1-202ENST00000368905 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.46
SCNM1-202ENST00000368905 PCMTD1Q96MG8 357 aaPredicted RBP12.21□□□□□ -0.46
SCNM1-202ENST00000368905 G3BP2Q9UN86 482 aaKnown RBP12.21□□□□□ -0.46
SCNM1-202ENST00000368905 MYO5BQ9ULV0 1848 aa12.21□□□□□ -0.46
SCNM1-202ENST00000368905 EXOC6Q8TAG9 804 aa12.2□□□□□ -0.46
SCNM1-202ENST00000368905 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
SCNM1-202ENST00000368905 SLFN5Q08AF3 891 aa12.2□□□□□ -0.46
SCNM1-202ENST00000368905 TTC30BQ8N4P2 665 aa12.2□□□□□ -0.46
SCNM1-202ENST00000368905 CALR3Q96L12 384 aaKnown RBP12.2□□□□□ -0.46
SCNM1-202ENST00000368905 MYCBPQ99417 103 aaPredicted RBP12.2□□□□□ -0.46
SCNM1-202ENST00000368905 ABCF2Q9UG63 623 aa12.2□□□□□ -0.46
SCNM1-202ENST00000368905 MRVI1Q9Y6F6 885 aa12.2□□□□□ -0.46
SCNM1-202ENST00000368905 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
SCNM1-202ENST00000368905 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.19□□□□□ -0.46
SCNM1-202ENST00000368905 TDO2P48775 406 aa12.19□□□□□ -0.46
SCNM1-202ENST00000368905 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
SCNM1-202ENST00000368905 APAF1O14727 1248 aa12.18□□□□□ -0.46
SCNM1-202ENST00000368905 POGKQ9P215 609 aa12.18□□□□□ -0.46
SCNM1-202ENST00000368905 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
SCNM1-202ENST00000368905 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
SCNM1-202ENST00000368905 CBFA2T2O43439 604 aa12.18□□□□□ -0.46
SCNM1-202ENST00000368905 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
SCNM1-202ENST00000368905 NLGN1Q8N2Q7 840 aa12.18□□□□□ -0.46
SCNM1-202ENST00000368905 SCINQ9Y6U3 715 aa12.18□□□□□ -0.46
SCNM1-202ENST00000368905 NKTRP30414 1462 aaKnown RBP12.18□□□□□ -0.46
SCNM1-202ENST00000368905 SPATA31D1Q6ZQQ2 1576 aa12.17□□□□□ -0.46
SCNM1-202ENST00000368905 SRPK2P78362 688 aaKnown RBP12.17□□□□□ -0.46
SCNM1-202ENST00000368905 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
SCNM1-202ENST00000368905 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
SCNM1-202ENST00000368905 BICDL2A1A5D9 508 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 CT47B1P0C2W7 299 aaPredicted RBP12.16□□□□□ -0.46
SCNM1-202ENST00000368905 HDLBPQ00341 1268 aaKnown RBP12.16□□□□□ -0.46
SCNM1-202ENST00000368905 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 PLEKHG6Q3KR16 790 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 ENOX1Q8TC92 643 aaKnown RBP12.16□□□□□ -0.46
SCNM1-202ENST00000368905 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 VRTNQ9H8Y1 702 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 C3P01024 1663 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 ZMYM3Q14202 1370 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 PTPRMP28827 1452 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
SCNM1-202ENST00000368905 E2F4Q16254 413 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 STK26Q9P289 416 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
SCNM1-202ENST00000368905 ALKQ9UM73 1620 aa12.16□□□□□ -0.46
SCNM1-202ENST00000368905 MS4A1P11836 297 aa12.15□□□□□ -0.46
SCNM1-202ENST00000368905 FBXO31Q5XUX0 539 aaPredicted RBP12.15□□□□□ -0.46
SCNM1-202ENST00000368905 TRIM34Q9BYJ4 488 aa12.15□□□□□ -0.46
SCNM1-202ENST00000368905 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
SCNM1-202ENST00000368905 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
SCNM1-202ENST00000368905 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
SCNM1-202ENST00000368905 DLC1Q96QB1 1528 aa12.15□□□□□ -0.46
SCNM1-202ENST00000368905 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.47
SCNM1-202ENST00000368905 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.47
SCNM1-202ENST00000368905 HDGFL2Q7Z4V5 671 aaPredicted RBP12.15□□□□□ -0.47
SCNM1-202ENST00000368905 NPAS4Q8IUM7 802 aa12.15□□□□□ -0.47
SCNM1-202ENST00000368905 CUEDC1Q9NWM3 386 aaPredicted RBP12.15□□□□□ -0.47
SCNM1-202ENST00000368905 MED14O60244 1454 aa12.14□□□□□ -0.47
SCNM1-202ENST00000368905 SYNRGQ9UMZ2 1314 aa12.14□□□□□ -0.47
SCNM1-202ENST00000368905 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
SCNM1-202ENST00000368905 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
SCNM1-202ENST00000368905 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
SCNM1-202ENST00000368905 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
SCNM1-202ENST00000368905 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 MTHFSP49914 203 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 TCEAL1Q15170 157 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
SCNM1-202ENST00000368905 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
SCNM1-202ENST00000368905 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 RIMS2Q9UQ26 1411 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 RECKO95980 971 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 VAMP1P23763 118 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 KLF15Q9UIH9 416 aa12.13□□□□□ -0.47
SCNM1-202ENST00000368905 PLIN1O60240 522 aa12.12□□□□□ -0.47
SCNM1-202ENST00000368905 CD53P19397 219 aa12.12□□□□□ -0.47
SCNM1-202ENST00000368905 TNNT2P45379 298 aaPredicted RBP12.12□□□□□ -0.47
SCNM1-202ENST00000368905 SAFB2Q14151 953 aaKnown RBP eCLIP12.12□□□□□ -0.47
SCNM1-202ENST00000368905 NAP1L4Q99733 375 aaKnown RBP12.12□□□□□ -0.47
SCNM1-202ENST00000368905 BRINP2Q9C0B6 783 aa12.12□□□□□ -0.47
SCNM1-202ENST00000368905 SFMBT1Q9UHJ3 866 aa12.12□□□□□ -0.47
SCNM1-202ENST00000368905 A0A1W2PP64 1363 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 SMAPO00193 183 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 PEX19P40855 299 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 CEBPAP49715 358 aaPredicted RBP12.11□□□□□ -0.47
SCNM1-202ENST00000368905 FMNL3Q8IVF7 1028 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 TANGO6Q9C0B7 1094 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 PNNQ9H307 717 aaKnown RBP12.11□□□□□ -0.47
SCNM1-202ENST00000368905 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
SCNM1-202ENST00000368905 ANKRD26Q9UPS8 1709 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 RFX1P22670 979 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 ERCC5P28715 1186 aaPredicted RBP12.11□□□□□ -0.47
SCNM1-202ENST00000368905 NT5DC4Q86YG4 428 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms