RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
SNX27-201ENST00000368838 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
SNX27-201ENST00000368838 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
SNX27-201ENST00000368838 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
SNX27-201ENST00000368838 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
SNX27-201ENST00000368838 IL13P35225 146 aa11.54□□□□□ -0.56
SNX27-201ENST00000368838 CNGB1Q14028 1251 aaPredicted RBP11.54□□□□□ -0.56
SNX27-201ENST00000368838 ZNF530Q6P9A1 599 aaPredicted RBP11.54□□□□□ -0.56
SNX27-201ENST00000368838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.562e-7■□□□□ 9.4
SNX27-201ENST00000368838 IGSF1Q8N6C5 1336 aa11.54□□□□□ -0.56
SNX27-201ENST00000368838 PLEKHG2Q9H7P9 1386 aa11.54□□□□□ -0.56
SNX27-201ENST00000368838 KDM6AO15550 1401 aaPredicted RBP11.54□□□□□ -0.56
SNX27-201ENST00000368838 ZNF831Q5JPB2 1677 aa11.54□□□□□ -0.56
SNX27-201ENST00000368838 BRCA1P38398 1863 aaKnown RBP11.54□□□□□ -0.56
SNX27-201ENST00000368838 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
SNX27-201ENST00000368838 C1QTNF8P60827 252 aa11.53□□□□□ -0.56
SNX27-201ENST00000368838 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
SNX27-201ENST00000368838 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
SNX27-201ENST00000368838 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
SNX27-201ENST00000368838 KDRP35968 1356 aa11.52□□□□□ -0.57
SNX27-201ENST00000368838 GRIN3BO60391 1043 aa11.52□□□□□ -0.57
SNX27-201ENST00000368838 SSFA2P28290 1259 aa11.52□□□□□ -0.57
SNX27-201ENST00000368838 PLEKHO1Q53GL0 409 aaPredicted RBP11.52□□□□□ -0.57
SNX27-201ENST00000368838 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
SNX27-201ENST00000368838 ZNF526Q8TF50 670 aaPredicted RBP11.52□□□□□ -0.57
SNX27-201ENST00000368838 CD2APQ9Y5K6 639 aa11.52□□□□□ -0.57
SNX27-201ENST00000368838 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
SNX27-201ENST00000368838 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
SNX27-201ENST00000368838 ERICH6BQ5W0A0 696 aa11.51□□□□□ -0.57
SNX27-201ENST00000368838 SULT6B1Q6IMI4 303 aa11.51□□□□□ -0.57
SNX27-201ENST00000368838 WDR63Q8IWG1 891 aa11.51□□□□□ -0.57
SNX27-201ENST00000368838 ATP10DQ9P241 1426 aa11.5□□□□□ -0.57
SNX27-201ENST00000368838 PTCD1O75127 700 aaKnown RBP11.5□□□□□ -0.57
SNX27-201ENST00000368838 MMP10P09238 476 aa11.5□□□□□ -0.57
SNX27-201ENST00000368838 CABP4P57796 275 aa11.5□□□□□ -0.57
SNX27-201ENST00000368838 CCDC88AQ3V6T2 1871 aa11.5□□□□□ -0.57
SNX27-201ENST00000368838 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
SNX27-201ENST00000368838 ERVV-2B6SEH9 535 aa11.49□□□□□ -0.57
SNX27-201ENST00000368838 NUBP1P53384 320 aa11.49□□□□□ -0.57
SNX27-201ENST00000368838 NBR1Q14596 966 aa11.49□□□□□ -0.57
SNX27-201ENST00000368838 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
SNX27-201ENST00000368838 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
SNX27-201ENST00000368838 IL16Q14005 1332 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 HMOX1P09601 288 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 U2AF1L5P0DN76 240 aaPredicted RBP11.48□□□□□ -0.57
SNX27-201ENST00000368838 U2AF1Q01081 240 aaKnown RBP eCLIP11.48□□□□□ -0.571e-6■■■■□ 25.4
SNX27-201ENST00000368838 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 NFATC2IPQ8NCF5 419 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
SNX27-201ENST00000368838 RSPH6AQ9H0K4 717 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 RTCBQ9Y3I0 505 aaKnown RBP11.48□□□□□ -0.57
SNX27-201ENST00000368838 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
SNX27-201ENST00000368838 APAF1O14727 1248 aa11.47□□□□□ -0.57
SNX27-201ENST00000368838 HSP90AB1P08238 724 aaKnown RBP11.47□□□□□ -0.57
SNX27-201ENST00000368838 HMGB2P26583 209 aaKnown RBP11.47□□□□□ -0.57
SNX27-201ENST00000368838 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
SNX27-201ENST00000368838 SBF1O95248 1867 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 CACNA1SQ13698 1873 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 E9PSI1 815 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
SNX27-201ENST00000368838 RFC4P35249 363 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
SNX27-201ENST00000368838 SRP68Q9UHB9 627 aaKnown RBP11.46□□□□□ -0.57
SNX27-201ENST00000368838 SIPA1L3O60292 1781 aaPredicted RBP11.45□□□□□ -0.58
SNX27-201ENST00000368838 UBR2Q8IWV8 1755 aa11.45□□□□□ -0.58
SNX27-201ENST00000368838 CT47B1P0C2W7 299 aaPredicted RBP11.45□□□□□ -0.58
SNX27-201ENST00000368838 LGR6Q9HBX8 967 aa11.45□□□□□ -0.58
SNX27-201ENST00000368838 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
SNX27-201ENST00000368838 RPS6KA4O75676 772 aa11.44□□□□□ -0.58
SNX27-201ENST00000368838 NEFMP07197 916 aa11.44□□□□□ -0.58
SNX27-201ENST00000368838 GYS1P13807 737 aa11.44□□□□□ -0.58
SNX27-201ENST00000368838 TMPOP42166 694 aaKnown RBP11.44□□□□□ -0.58
SNX27-201ENST00000368838 CRKLP46109 303 aaKnown RBP11.44□□□□□ -0.58
SNX27-201ENST00000368838 DUSP27Q5VZP5 1158 aa11.44□□□□□ -0.58
SNX27-201ENST00000368838 GPBP1L1Q9HC44 474 aaPredicted RBP11.44□□□□□ -0.58
SNX27-201ENST00000368838 BCS1LQ9Y276 419 aa11.44□□□□□ -0.58
SNX27-201ENST00000368838 ADCY9O60503 1353 aa11.44□□□□□ -0.58
SNX27-201ENST00000368838 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
SNX27-201ENST00000368838 DPEP1P16444 411 aa11.43□□□□□ -0.58
SNX27-201ENST00000368838 SLC39A6Q13433 755 aa11.43□□□□□ -0.58
SNX27-201ENST00000368838 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
SNX27-201ENST00000368838 DNAJC10Q8IXB1 793 aa11.43□□□□□ -0.58
SNX27-201ENST00000368838 NLGN1Q8N2Q7 840 aa11.43□□□□□ -0.58
SNX27-201ENST00000368838 MAPK8IP3Q9UPT6 1336 aa11.43□□□□□ -0.58
SNX27-201ENST00000368838 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
SNX27-201ENST00000368838 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
SNX27-201ENST00000368838 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
SNX27-201ENST00000368838 GSE1Q14687 1217 aa11.42□□□□□ -0.58
SNX27-201ENST00000368838 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
SNX27-201ENST00000368838 CEP350Q5VT06 3117 aa11.42□□□□□ -0.58
SNX27-201ENST00000368838 KCPQ6ZWJ8 1503 aa11.42□□□□□ -0.58
SNX27-201ENST00000368838 HTATSF1O43719 755 aaKnown RBP11.41□□□□□ -0.58
SNX27-201ENST00000368838 DDR1Q08345 913 aa11.41□□□□□ -0.58
SNX27-201ENST00000368838 NFE2L2Q16236 605 aa11.41□□□□□ -0.58
SNX27-201ENST00000368838 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms