RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
ECHDC1-201ENST00000368287 TLR1Q15399 786 aa8.06□□□□□ -1.12
ECHDC1-201ENST00000368287 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
ECHDC1-201ENST00000368287 KLF15Q9UIH9 416 aa8.06□□□□□ -1.12
ECHDC1-201ENST00000368287 SPDYE3A6NKU9 549 aa8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 DYRK3O43781 588 aa8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 APBA3O96018 575 aa8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 CD33P20138 364 aa8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 PRRT3Q5FWE3 981 aa8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 NLRP8Q86W28 1048 aa8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 CDCA7Q9BWT1 371 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-201ENST00000368287 MAPTP10636 758 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-201ENST00000368287 C1orf216Q8TAB5 229 aa8.04□□□□□ -1.12
ECHDC1-201ENST00000368287 BTBD11A6QL63 1104 aa8.03□□□□□ -1.12
ECHDC1-201ENST00000368287 KHNYNO15037 678 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-201ENST00000368287 PCBP4P57723 403 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-201ENST00000368287 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-201ENST00000368287 PRR12Q9ULL5 1215 aa8.03□□□□□ -1.12
ECHDC1-201ENST00000368287 ATP4AP20648 1035 aa8.02□□□□□ -1.13
ECHDC1-201ENST00000368287 TNP2Q05952 138 aa8.02□□□□□ -1.13
ECHDC1-201ENST00000368287 AIDAQ96BJ3 306 aa8.02□□□□□ -1.13
ECHDC1-201ENST00000368287 ETNK1Q9HBU6 452 aa8.02□□□□□ -1.13
ECHDC1-201ENST00000368287 PRSS36Q5K4E3 855 aa8.01□□□□□ -1.13
ECHDC1-201ENST00000368287 ZNF468Q5VIY5 522 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-201ENST00000368287 A0A1W2PNR3 127 aa8□□□□□ -1.13
ECHDC1-201ENST00000368287 STAU1O95793 577 aaKnown RBP8□□□□□ -1.13
ECHDC1-201ENST00000368287 ARSJQ5FYB0 599 aaPredicted RBP8□□□□□ -1.13
ECHDC1-201ENST00000368287 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
ECHDC1-201ENST00000368287 HCN2Q9UL51 889 aa8□□□□□ -1.13
ECHDC1-201ENST00000368287 ALAS2P22557 587 aa7.99□□□□□ -1.13
ECHDC1-201ENST00000368287 NIFKQ9BYG3 293 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-201ENST00000368287 CEP126Q9P2H0 1117 aa7.99□□□□□ -1.13
ECHDC1-201ENST00000368287 ELOA3CA0A087WX78 387 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-201ENST00000368287 ELOA3DA6NLF2 546 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-201ENST00000368287 USP4Q13107 963 aa7.98□□□□□ -1.13
ECHDC1-201ENST00000368287 ELOA3BQ3SY89 546 aa7.98□□□□□ -1.13
ECHDC1-201ENST00000368287 ELOA3Q8NG57 546 aa7.98□□□□□ -1.13
ECHDC1-201ENST00000368287 NACC1Q96RE7 527 aa7.98□□□□□ -1.13
ECHDC1-201ENST00000368287 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
ECHDC1-201ENST00000368287 FAM157BP0CG42 384 aa7.97□□□□□ -1.13
ECHDC1-201ENST00000368287 NBPF1Q3BBV0 1214 aa7.97□□□□□ -1.13
ECHDC1-201ENST00000368287 KRTAP9-9Q9BYP9 154 aa7.97□□□□□ -1.13
ECHDC1-201ENST00000368287 KRTAP9-4Q9BYQ2 154 aa7.97□□□□□ -1.13
ECHDC1-201ENST00000368287 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
ECHDC1-201ENST00000368287 GJA3Q9Y6H8 435 aa7.97□□□□□ -1.13
ECHDC1-201ENST00000368287 TATP17735 454 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-201ENST00000368287 LRP8Q14114 963 aa7.96□□□□□ -1.14
ECHDC1-201ENST00000368287 MARK1Q9P0L2 795 aa7.96□□□□□ -1.14
ECHDC1-201ENST00000368287 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
ECHDC1-201ENST00000368287 NDUFB9Q9Y6M9 179 aa7.95□□□□□ -1.14
ECHDC1-201ENST00000368287 TRIM28Q13263 835 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-201ENST00000368287 SYT9Q86SS6 491 aa7.94□□□□□ -1.14
ECHDC1-201ENST00000368287 GOPCQ9HD26 462 aa7.94□□□□□ -1.14
ECHDC1-201ENST00000368287 M0R082 166 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 GPR37L1O60883 481 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 INHAP05111 366 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 GDF10P55107 478 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 OXLD1Q5BKU9 147 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 ZNF417Q8TAU3 575 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 SIRT1Q96EB6 747 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 ZNF587Q96SQ5 575 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 GOLGA2P5Q9HBQ8 144 aa7.93□□□□□ -1.14
ECHDC1-201ENST00000368287 SCNN1DP51172 638 aa7.92□□□□□ -1.14
ECHDC1-201ENST00000368287 LAMC2Q13753 1193 aa7.92□□□□□ -1.14
ECHDC1-201ENST00000368287 TSGA10IPQ3SY00 556 aa7.92□□□□□ -1.14
ECHDC1-201ENST00000368287 ZIC5Q96T25 663 aa7.92□□□□□ -1.14
ECHDC1-201ENST00000368287 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
ECHDC1-201ENST00000368287 ZDHHC3Q9NYG2 299 aa7.92□□□□□ -1.14
ECHDC1-201ENST00000368287 H2AFB1P0C5Y9 115 aa7.91□□□□□ -1.14
ECHDC1-201ENST00000368287 H2AFB2P0C5Z0 115 aa7.91□□□□□ -1.14
ECHDC1-201ENST00000368287 SMTNP53814 917 aa7.91□□□□□ -1.14
ECHDC1-201ENST00000368287 GRIK4Q16099 956 aa7.91□□□□□ -1.14
ECHDC1-201ENST00000368287 SAMD5Q5TGI4 173 aa7.91□□□□□ -1.14
ECHDC1-201ENST00000368287 HYAL3O43820 417 aaPredicted RBP7.9□□□□□ -1.14
ECHDC1-201ENST00000368287 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
ECHDC1-201ENST00000368287 BICDL1Q6ZP65 573 aa7.9□□□□□ -1.14
ECHDC1-201ENST00000368287 MDFIQ99750 246 aa7.9□□□□□ -1.14
ECHDC1-201ENST00000368287 PRDM6Q9NQX0 595 aa7.9□□□□□ -1.14
ECHDC1-201ENST00000368287 C9orf172C9J069 976 aa7.89□□□□□ -1.15
ECHDC1-201ENST00000368287 APBB1O00213 710 aa7.89□□□□□ -1.15
ECHDC1-201ENST00000368287 EFSO43281 561 aa7.89□□□□□ -1.15
ECHDC1-201ENST00000368287 SIN3BO75182 1162 aa7.89□□□□□ -1.15
ECHDC1-201ENST00000368287 COL9A3Q14050 684 aaPredicted RBP7.89□□□□□ -1.15
ECHDC1-201ENST00000368287 ADARB2-AS1A8MUL3 147 aa7.88□□□□□ -1.15
ECHDC1-201ENST00000368287 SOCS7O14512 581 aa7.88□□□□□ -1.15
ECHDC1-201ENST00000368287 ALBP02768 609 aa7.88□□□□□ -1.15
ECHDC1-201ENST00000368287 PHTF2Q8N3S3 785 aa7.88□□□□□ -1.15
ECHDC1-201ENST00000368287 CABP1Q9NZU7 370 aa7.88□□□□□ -1.15
ECHDC1-201ENST00000368287 SERTAD1Q9UHV2 236 aa7.88□□□□□ -1.15
ECHDC1-201ENST00000368287 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
ECHDC1-201ENST00000368287 C8orf86Q6ZUL3 223 aa7.87□□□□□ -1.15
ECHDC1-201ENST00000368287 MICALL1Q8N3F8 863 aa7.87□□□□□ -1.15
ECHDC1-201ENST00000368287 MTMR14Q8NCE2 650 aa7.87□□□□□ -1.15
ECHDC1-201ENST00000368287 BANK1Q8NDB2 785 aa7.87□□□□□ -1.15
ECHDC1-201ENST00000368287 CDK2AP1O14519 115 aa7.86□□□□□ -1.15
ECHDC1-201ENST00000368287 NID1P14543 1247 aa7.86□□□□□ -1.15
ECHDC1-201ENST00000368287 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
ECHDC1-201ENST00000368287 ADGRE1Q14246 886 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms