RNA–Protein interactions for RNA: ENST00000368261.7

CCT3-205, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 5

Gene CCT3, Length 863 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-205	ENST00000368261	CHPF2	Q9P2E5	772 aa		13.95	□□□□□ -0.18
CCT3-205	ENST00000368261	ASAP1	Q9ULH1	1129 aa		13.95	□□□□□ -0.18
CCT3-205	ENST00000368261	MYH14	Q7Z406	1995 aa	Known RBP	13.94	□□□□□ -0.18
CCT3-205	ENST00000368261	IPO8	O15397	1037 aa	Known RBP	13.94	□□□□□ -0.18
CCT3-205	ENST00000368261	CANX	P27824	592 aa	Known RBP	13.94	□□□□□ -0.18
CCT3-205	ENST00000368261	PRIM1	P49642	420 aa	Known RBP	13.94	□□□□□ -0.18
CCT3-205	ENST00000368261	PHAX	Q9H814	394 aa	Known RBP	13.94	□□□□□ -0.18
CCT3-205	ENST00000368261	USP16	Q9Y5T5	823 aa		13.94	□□□□□ -0.18
CCT3-205	ENST00000368261	TAF1L	Q8IZX4	1826 aa		13.94	□□□□□ -0.18
CCT3-205	ENST00000368261	ANXA1	P04083	346 aa		13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	SNRPA1	P09661	255 aa	Known RBP	13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	EIF2S2	P20042	333 aa	Known RBP	13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	FLII	Q13045	1269 aa		13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	B4GALNT3	Q6L9W6	998 aa		13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	TTC5	Q8N0Z6	440 aa		13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	API5	Q9BZZ5	524 aa	Known RBP	13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	QTRT2	Q9H974	415 aa	Known RBP	13.93	□□□□□ -0.18
CCT3-205	ENST00000368261	MS4A1	P11836	297 aa		13.92	□□□□□ -0.18
CCT3-205	ENST00000368261	INTS3	Q68E01	1043 aa	Known RBP	13.92	□□□□□ -0.18
CCT3-205	ENST00000368261	STK31	Q9BXU1	1019 aa		13.92	□□□□□ -0.18
CCT3-205	ENST00000368261	ADCY9	O60503	1353 aa		13.92	□□□□□ -0.18
CCT3-205	ENST00000368261	AFDN	P55196	1824 aa	Known RBP	13.92	□□□□□ -0.18
CCT3-205	ENST00000368261	NBPF26	B4DH59	902 aa		13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	KCNQ2	O43526	872 aa		13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	NBPF14	Q5TI25	921 aa		13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	NBPF10	Q6P3W6	841 aa	Known RBP	13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	PTF1A	Q7RTS3	328 aa		13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	SEPT12	Q8IYM1	358 aa		13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	NBPF15	Q8N660	670 aa		13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	ACSBG1	Q96GR2	724 aa		13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
CCT3-205	ENST00000368261	RGS17	Q9UGC6	210 aa	Predicted RBP	13.91	□□□□□ -0.18
CCT3-205	ENST00000368261		F6X3S4	739 aa		13.9	□□□□□ -0.18
CCT3-205	ENST00000368261	VSIG10	Q8N0Z9	540 aa		13.9	□□□□□ -0.18
CCT3-205	ENST00000368261	DBF4	Q9UBU7	674 aa	Predicted RBP	13.9	□□□□□ -0.18
CCT3-205	ENST00000368261	ERBB4	Q15303	1308 aa		13.9	□□□□□ -0.19
CCT3-205	ENST00000368261	KDM2B	Q8NHM5	1336 aa		13.9	□□□□□ -0.19
CCT3-205	ENST00000368261	ANKRD36C	Q5JPF3	1778 aa		13.89	□□□□□ -0.19
CCT3-205	ENST00000368261	ZBTB7B	O15156	539 aa	Predicted RBP	13.89	□□□□□ -0.19
CCT3-205	ENST00000368261	PTCD1	O75127	700 aa	Known RBP	13.89	□□□□□ -0.19
CCT3-205	ENST00000368261	FTSJ3	Q8IY81	847 aa	Known RBP	13.89	□□□□□ -0.19
CCT3-205	ENST00000368261	ZBTB40	Q9NUA8	1239 aa		13.89	□□□□□ -0.19
CCT3-205	ENST00000368261	PCDHB15	Q9Y5E8	787 aa		13.89	□□□□□ -0.19
CCT3-205	ENST00000368261	ATP10D	Q9P241	1426 aa		13.89	□□□□□ -0.19
CCT3-205	ENST00000368261	FAM182B	Q5T319	152 aa		13.88	□□□□□ -0.19
CCT3-205	ENST00000368261	ITPRIP	Q8IWB1	547 aa		13.88	□□□□□ -0.19
CCT3-205	ENST00000368261	DNAJC10	Q8IXB1	793 aa		13.88	□□□□□ -0.19
CCT3-205	ENST00000368261	DDX19B	Q9UMR2	479 aa		13.88	□□□□□ -0.19
CCT3-205	ENST00000368261	TNS1	Q9HBL0	1735 aa	Known RBP	13.87	□□□□□ -0.19
CCT3-205	ENST00000368261	PIP4K2A	P48426	406 aa	Predicted RBP	13.87	□□□□□ -0.19
CCT3-205	ENST00000368261	AAMP	Q13685	434 aa		13.87	□□□□□ -0.19
CCT3-205	ENST00000368261	ZNF772	Q68DY9	489 aa	Predicted RBP	13.87	□□□□□ -0.19
CCT3-205	ENST00000368261	CHMP4A	Q9BY43	222 aa		13.87	□□□□□ -0.19
CCT3-205	ENST00000368261	NUP98	P52948	1817 aa		13.87	□□□□□ -0.19
CCT3-205	ENST00000368261	BCOR	Q6W2J9	1755 aa		13.86	□□□□□ -0.19
CCT3-205	ENST00000368261	PALLD	Q8WX93	1383 aa		13.86	□□□□□ -0.19
CCT3-205	ENST00000368261	A1BG	P04217	495 aa		13.86	□□□□□ -0.19
CCT3-205	ENST00000368261	RBM6	P78332	1123 aa	Known RBP	13.86	□□□□□ -0.19
CCT3-205	ENST00000368261	FKBP5	Q13451	457 aa	Predicted RBP	13.86	□□□□□ -0.19
CCT3-205	ENST00000368261	SYTL4	Q96C24	671 aa	Predicted RBP	13.86	□□□□□ -0.19
CCT3-205	ENST00000368261	HYPK	Q9NX55	129 aa		13.86	□□□□□ -0.19
CCT3-205	ENST00000368261	CYP19A1	P11511	503 aa	Predicted RBP	13.85	□□□□□ -0.19
CCT3-205	ENST00000368261	CCDC136	Q96JN2	1154 aa		13.85	□□□□□ -0.19
CCT3-205	ENST00000368261	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.84	□□□□□ -0.19
CCT3-205	ENST00000368261		A0A0G2JS52	829 aa		13.84	□□□□□ -0.19
CCT3-205	ENST00000368261	IGHD	P01880	384 aa		13.84	□□□□□ -0.19
CCT3-205	ENST00000368261	MYT1	Q01538	1121 aa		13.84	□□□□□ -0.19
CCT3-205	ENST00000368261	ITPK1	Q13572	414 aa		13.84	□□□□□ -0.19
CCT3-205	ENST00000368261	BEND3	Q5T5X7	828 aa		13.84	□□□□□ -0.19
CCT3-205	ENST00000368261	XAGE3	Q8WTP9	111 aa		13.84	□□□□□ -0.19
CCT3-205	ENST00000368261	PI4KAP2	A4QPH2	592 aa		13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	MYL6B	P14649	208 aa		13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	CCT4	P50991	539 aa	Known RBP	13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	POTEA	Q6S8J7	498 aa		13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	KSR2	Q6VAB6	950 aa		13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	PI4KAP1	Q8N8J0	262 aa		13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	DNAAF4	Q8WXU2	420 aa		13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	MEIS3	Q99687	375 aa		13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	RBM42	Q9BTD8	480 aa	Known RBP	13.83	□□□□□ -0.2
CCT3-205	ENST00000368261	LOC102724428	A0A0B4J2F2	783 aa		13.82	□□□□□ -0.2
CCT3-205	ENST00000368261	SIK1	P57059	783 aa		13.82	□□□□□ -0.2
CCT3-205	ENST00000368261	COPS6	Q7L5N1	327 aa		13.82	□□□□□ -0.2
CCT3-205	ENST00000368261	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.82	□□□□□ -0.2
CCT3-205	ENST00000368261	SCN7A	Q01118	1682 aa		13.82	□□□□□ -0.2
CCT3-205	ENST00000368261	C4A	P0C0L4	1744 aa		13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	C4B	P0C0L5	1744 aa		13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	RGPD4	Q7Z3J3	1758 aa		13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	TTLL7	Q6ZT98	887 aa		13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	KRT27	Q7Z3Y8	459 aa		13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	SIRT2	Q8IXJ6	389 aa		13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	SMARCC1	Q92922	1105 aa	Predicted RBP	13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	MAP3K2	Q9Y2U5	619 aa		13.81	□□□□□ -0.2
CCT3-205	ENST00000368261	UBR3	Q6ZT12	1888 aa		13.8	□□□□□ -0.2
CCT3-205	ENST00000368261	IGKV5-2	P06315	115 aa		13.8	□□□□□ -0.2
CCT3-205	ENST00000368261	INTS5	Q6P9B9	1019 aa	Known RBP	13.8	□□□□□ -0.2
CCT3-205	ENST00000368261	SLC4A10	Q6U841	1118 aa		13.8	□□□□□ -0.2
CCT3-205	ENST00000368261	USP44	Q9H0E7	712 aa		13.8	□□□□□ -0.2
CCT3-205	ENST00000368261	C1orf115	Q9H7X2	142 aa		13.8	□□□□□ -0.2
CCT3-205	ENST00000368261	ZBTB1	Q9Y2K1	713 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms