RNA–Protein interactions for RNA: ENST00000368206.5

HDGF-202, Transcript of heparin binding growth factor, humanhuman

TSL 5 BASIC

Gene HDGF, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-202ENST00000368206 VIRMAQ69YN4 1812 aaKnown RBP17.43■□□□□ 0.38
HDGF-202ENST00000368206 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
HDGF-202ENST00000368206 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
HDGF-202ENST00000368206 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
HDGF-202ENST00000368206 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
HDGF-202ENST00000368206 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
HDGF-202ENST00000368206 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
HDGF-202ENST00000368206 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
HDGF-202ENST00000368206 TJP1Q07157 1748 aa17.41■□□□□ 0.38
HDGF-202ENST00000368206 COL15A1P39059 1388 aa17.4■□□□□ 0.38
HDGF-202ENST00000368206 KCNQ3O43525 872 aa17.4■□□□□ 0.38
HDGF-202ENST00000368206 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
HDGF-202ENST00000368206 TM4SF1P30408 202 aa17.4■□□□□ 0.38
HDGF-202ENST00000368206 DPEP1P16444 411 aa17.39■□□□□ 0.37
HDGF-202ENST00000368206 ZEB1P37275 1124 aaPredicted RBP17.39■□□□□ 0.37
HDGF-202ENST00000368206 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
HDGF-202ENST00000368206 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
HDGF-202ENST00000368206 BCS1LQ9Y276 419 aa17.39■□□□□ 0.37
HDGF-202ENST00000368206 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.37
HDGF-202ENST00000368206 A1BGP04217 495 aa17.38■□□□□ 0.37
HDGF-202ENST00000368206 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
HDGF-202ENST00000368206 DDR1Q08345 913 aa17.38■□□□□ 0.37
HDGF-202ENST00000368206 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
HDGF-202ENST00000368206 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
HDGF-202ENST00000368206 POLRMTO00411 1230 aaKnown RBP17.37■□□□□ 0.37
HDGF-202ENST00000368206 NFIXQ14938 502 aa17.37■□□□□ 0.37
HDGF-202ENST00000368206 PIM2Q9P1W9 311 aa17.37■□□□□ 0.37
HDGF-202ENST00000368206 TBC1D2BQ9UPU7 963 aa17.37■□□□□ 0.37
HDGF-202ENST00000368206 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
HDGF-202ENST00000368206 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
HDGF-202ENST00000368206 BICDL1Q6ZP65 573 aa17.36■□□□□ 0.37
HDGF-202ENST00000368206 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
HDGF-202ENST00000368206 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
HDGF-202ENST00000368206 SERPINB2P05120 415 aa17.35■□□□□ 0.37
HDGF-202ENST00000368206 C10orf71Q711Q0 1435 aa17.35■□□□□ 0.37
HDGF-202ENST00000368206 PXDNLA1KZ92 1463 aa17.34■□□□□ 0.37
HDGF-202ENST00000368206 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.376e-7■□□□□ 10.3
HDGF-202ENST00000368206 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
HDGF-202ENST00000368206 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
HDGF-202ENST00000368206 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
HDGF-202ENST00000368206 NPHP1O15259 732 aa17.33■□□□□ 0.36
HDGF-202ENST00000368206 RIPK4P57078 832 aa17.33■□□□□ 0.36
HDGF-202ENST00000368206 DALRD3Q5D0E6 543 aaKnown RBP17.33■□□□□ 0.36
HDGF-202ENST00000368206 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.36
HDGF-202ENST00000368206 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
HDGF-202ENST00000368206 SETDB2Q96T68 719 aa17.32■□□□□ 0.36
HDGF-202ENST00000368206 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
HDGF-202ENST00000368206 KCNA3P22001 575 aa17.31■□□□□ 0.36
HDGF-202ENST00000368206 CHRNA5P30532 468 aa17.31■□□□□ 0.36
HDGF-202ENST00000368206 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
HDGF-202ENST00000368206 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
HDGF-202ENST00000368206 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
HDGF-202ENST00000368206 GIGYF1O75420 1035 aaPredicted RBP17.3■□□□□ 0.36
HDGF-202ENST00000368206 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
HDGF-202ENST00000368206 ZNF652Q9Y2D9 606 aa17.3■□□□□ 0.36
HDGF-202ENST00000368206 KIF13BQ9NQT8 1826 aa17.3■□□□□ 0.36
HDGF-202ENST00000368206 H0YIN7 160 aa17.29■□□□□ 0.36
HDGF-202ENST00000368206 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
HDGF-202ENST00000368206 N4BP2Q86UW6 1770 aaPredicted RBP17.29■□□□□ 0.36
HDGF-202ENST00000368206 UTRNP46939 3433 aa17.28■□□□□ 0.36
HDGF-202ENST00000368206 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
HDGF-202ENST00000368206 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
HDGF-202ENST00000368206 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
HDGF-202ENST00000368206 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
HDGF-202ENST00000368206 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
HDGF-202ENST00000368206 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
HDGF-202ENST00000368206 PDE6BP35913 854 aa17.27■□□□□ 0.36
HDGF-202ENST00000368206 EIF4A1P60842 406 aaKnown RBP17.27■□□□□ 0.36
HDGF-202ENST00000368206 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
HDGF-202ENST00000368206 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
HDGF-202ENST00000368206 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
HDGF-202ENST00000368206 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
HDGF-202ENST00000368206 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
HDGF-202ENST00000368206 TTLL6Q8N841 843 aa17.26■□□□□ 0.35
HDGF-202ENST00000368206 ZNF526Q8TF50 670 aaPredicted RBP17.26■□□□□ 0.35
HDGF-202ENST00000368206 ATP10DQ9P241 1426 aa17.26■□□□□ 0.35
HDGF-202ENST00000368206 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
HDGF-202ENST00000368206 NBPF26B4DH59 902 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 ST5P78524 1137 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 NBPF10Q6P3W6 841 aaKnown RBP17.25■□□□□ 0.35
HDGF-202ENST00000368206 NBPF15Q8N660 670 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 CNBD1Q8NA66 436 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 ADAMTS8Q9UP79 889 aa17.25■□□□□ 0.35
HDGF-202ENST00000368206 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
HDGF-202ENST00000368206 DLG5Q8TDM6 1919 aa17.24■□□□□ 0.35
HDGF-202ENST00000368206 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
HDGF-202ENST00000368206 ZNF622Q969S3 477 aaKnown RBP eCLIP17.24■□□□□ 0.354e-15■□□□□ 9.2
HDGF-202ENST00000368206 RGL2O15211 777 aa17.23■□□□□ 0.35
HDGF-202ENST00000368206 PRR5LQ6MZQ0 368 aa17.23■□□□□ 0.35
HDGF-202ENST00000368206 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
HDGF-202ENST00000368206 CCDC24Q8N4L8 307 aa17.23■□□□□ 0.35
HDGF-202ENST00000368206 GOLGB1Q14789 3259 aaKnown RBP17.22■□□□□ 0.35
HDGF-202ENST00000368206 MYL6BP14649 208 aa17.22■□□□□ 0.35
HDGF-202ENST00000368206 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
HDGF-202ENST00000368206 KIF6Q6ZMV9 814 aa17.22■□□□□ 0.35
HDGF-202ENST00000368206 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
HDGF-202ENST00000368206 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms