RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
VTA1-201ENST00000367621 DLG5Q8TDM6 1919 aa12.27□□□□□ -0.44
VTA1-201ENST00000367621 IL2RBP14784 551 aa12.27□□□□□ -0.45
VTA1-201ENST00000367621 TAF7Q15545 349 aaPredicted RBP12.27□□□□□ -0.45
VTA1-201ENST00000367621 KRT24Q2M2I5 525 aa12.27□□□□□ -0.45
VTA1-201ENST00000367621 C20orf194Q5TEA3 1177 aa12.27□□□□□ -0.45
VTA1-201ENST00000367621 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
VTA1-201ENST00000367621 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.45
VTA1-201ENST00000367621 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.45
VTA1-201ENST00000367621 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.45
VTA1-201ENST00000367621 C1orf141Q5JVX7 400 aa12.26□□□□□ -0.45
VTA1-201ENST00000367621 ERICH6BQ5W0A0 696 aa12.26□□□□□ -0.45
VTA1-201ENST00000367621 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
VTA1-201ENST00000367621 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
VTA1-201ENST00000367621 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
VTA1-201ENST00000367621 LRP6O75581 1613 aa12.26□□□□□ -0.45
VTA1-201ENST00000367621 RGL2O15211 777 aa12.25□□□□□ -0.45
VTA1-201ENST00000367621 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
VTA1-201ENST00000367621 IFNL2Q8IZJ0 200 aa12.25□□□□□ -0.45
VTA1-201ENST00000367621 TSPYL4Q9UJ04 414 aa12.25□□□□□ -0.45
VTA1-201ENST00000367621 ELL2O00472 640 aaPredicted RBP12.24□□□□□ -0.45
VTA1-201ENST00000367621 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
VTA1-201ENST00000367621 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
VTA1-201ENST00000367621 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
VTA1-201ENST00000367621 SPATA31A1Q5TZJ5 1347 aa12.24□□□□□ -0.45
VTA1-201ENST00000367621 BCL9LQ86UU0 1499 aa12.24□□□□□ -0.45
VTA1-201ENST00000367621 FNBP4Q8N3X1 1017 aaPredicted RBP12.24□□□□□ -0.45
VTA1-201ENST00000367621 BCL2L13Q9BXK5 485 aa12.24□□□□□ -0.45
VTA1-201ENST00000367621 ADAMTS7Q9UKP4 1686 aa12.24□□□□□ -0.45
VTA1-201ENST00000367621 SPATA31A5Q5VU36 1347 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 SPATA31A7Q8IWB4 1347 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 KCNQ3O43525 872 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
VTA1-201ENST00000367621 ZNF428Q96B54 188 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
VTA1-201ENST00000367621 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
VTA1-201ENST00000367621 UNC5CLQ8IV45 518 aa12.22□□□□□ -0.45
VTA1-201ENST00000367621 EXOC6Q8TAG9 804 aa12.22□□□□□ -0.45
VTA1-201ENST00000367621 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
VTA1-201ENST00000367621 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 NRAPQ86VF7 1730 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 RIMBP2O15034 1052 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 HSP90AB1P08238 724 aaKnown RBP12.21□□□□□ -0.45
VTA1-201ENST00000367621 TEFQ10587 303 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 C8orf37Q96NL8 207 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 CRBNQ96SW2 442 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.45
VTA1-201ENST00000367621 MRC1P22897 1456 aa12.21□□□□□ -0.46
VTA1-201ENST00000367621 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 BTBD11A6QL63 1104 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 RLBP1P12271 317 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 VPS72Q15906 364 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
VTA1-201ENST00000367621 NGLY1Q96IV0 654 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
VTA1-201ENST00000367621 THRAP3Q9Y2W1 955 aaKnown RBP12.2□□□□□ -0.46
VTA1-201ENST00000367621 TCERG1O14776 1098 aaKnown RBP12.19□□□□□ -0.46
VTA1-201ENST00000367621 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
VTA1-201ENST00000367621 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
VTA1-201ENST00000367621 PANK1Q8TE04 598 aa12.19□□□□□ -0.46
VTA1-201ENST00000367621 NOB1Q9ULX3 412 aaKnown RBP12.19□□□□□ -0.46
VTA1-201ENST00000367621 ERVV-2B6SEH9 535 aa12.18□□□□□ -0.46
VTA1-201ENST00000367621 TRIM27P14373 513 aa12.18□□□□□ -0.46
VTA1-201ENST00000367621 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
VTA1-201ENST00000367621 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
VTA1-201ENST00000367621 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
VTA1-201ENST00000367621 PPP4R2Q9NY27 417 aa12.18□□□□□ -0.46
VTA1-201ENST00000367621 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
VTA1-201ENST00000367621 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
VTA1-201ENST00000367621 SLC39A6Q13433 755 aa12.17□□□□□ -0.46
VTA1-201ENST00000367621 ZKSCAN2Q63HK3 967 aa12.17□□□□□ -0.46
VTA1-201ENST00000367621 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
VTA1-201ENST00000367621 EXOC5O00471 708 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 CABP4P57796 275 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 ZNF790Q6PG37 636 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 USP21Q9UK80 565 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
VTA1-201ENST00000367621 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
VTA1-201ENST00000367621 TNS2Q63HR2 1409 aa12.15□□□□□ -0.46
VTA1-201ENST00000367621 GIGYF1O75420 1035 aaPredicted RBP12.15□□□□□ -0.46
VTA1-201ENST00000367621 HOXB7P09629 217 aa12.15□□□□□ -0.46
VTA1-201ENST00000367621 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
VTA1-201ENST00000367621 G2E3Q7L622 706 aa12.14□□□□□ -0.47
VTA1-201ENST00000367621 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
VTA1-201ENST00000367621 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
VTA1-201ENST00000367621 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
VTA1-201ENST00000367621 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
VTA1-201ENST00000367621 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
VTA1-201ENST00000367621 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
VTA1-201ENST00000367621 AFF2P51816 1311 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms