RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 UBE2HP62256 183 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
RD3-201ENST00000367002 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 SMTNL1A8MU46 457 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
RD3-201ENST00000367002 ESYT1Q9BSJ8 1104 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
RD3-201ENST00000367002 METTL24Q5JXM2 366 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 MCM5P33992 734 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 ZNF165P49910 485 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 CCT2P78371 535 aaKnown RBP13.44□□□□□ -0.26
RD3-201ENST00000367002 LRSAM1Q6UWE0 723 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 UBXN4Q92575 508 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
RD3-201ENST00000367002 DDX19AQ9NUU7 478 aaKnown RBP13.44□□□□□ -0.26
RD3-201ENST00000367002 AIDAQ96BJ3 306 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 PKNOX2Q96KN3 472 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 TRAPPC8Q9Y2L5 1435 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 EPS15P42566 896 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 GIMAP6Q6P9H5 292 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
RD3-201ENST00000367002 HMGB1P09429 215 aaKnown RBP13.43□□□□□ -0.26
RD3-201ENST00000367002 RAB3GAP1Q15042 981 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
RD3-201ENST00000367002 LRP2BPQ9P2M1 347 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 SYCP2Q9BX26 1530 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 ARHGEF12Q9NZN5 1544 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 NECAB1Q8N987 351 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 ABCF2Q9UG63 623 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 C16orf45Q96MC5 204 aaPredicted RBP13.43□□□□□ -0.26
RD3-201ENST00000367002 PIK3R4Q99570 1358 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 TEX14Q8IWB6 1497 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 UHRF1BP1Q6BDS2 1440 aa13.43□□□□□ -0.26
RD3-201ENST00000367002 ANAPC15P60006 121 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 PDCL3Q9H2J4 239 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 UBE3BQ7Z3V4 1068 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 ZGPATQ8N5A5 531 aaKnown RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 NOL7Q9UMY1 257 aaKnown RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 ZBTB7BO15156 539 aaPredicted RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 ZSCAN22P10073 491 aaPredicted RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 CEP85Q6P2H3 762 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 CCDC43Q96MW1 224 aaKnown RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
RD3-201ENST00000367002 KIF18AQ8NI77 898 aa13.42□□□□□ -0.26
RD3-201ENST00000367002 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
RD3-201ENST00000367002 TNNT1P13805 278 aa13.41□□□□□ -0.26
RD3-201ENST00000367002 FSIP1Q8NA03 581 aa13.41□□□□□ -0.26
RD3-201ENST00000367002 DENND4BO75064 1496 aaPredicted RBP13.41□□□□□ -0.26
RD3-201ENST00000367002 STIM1Q13586 685 aa13.41□□□□□ -0.26
RD3-201ENST00000367002 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
RD3-201ENST00000367002 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
RD3-201ENST00000367002 CTAGE5O15320 804 aa13.41□□□□□ -0.26
RD3-201ENST00000367002 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
RD3-201ENST00000367002 GOLIM4O00461 696 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 JARID2Q92833 1246 aaPredicted RBP13.4□□□□□ -0.26
RD3-201ENST00000367002 NEK1Q96PY6 1258 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 CWC15Q9P013 229 aaKnown RBP13.4□□□□□ -0.26
RD3-201ENST00000367002 KIF2AO00139 706 aaPredicted RBP13.4□□□□□ -0.26
RD3-201ENST00000367002 STARD3NLO95772 234 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 CBX1P83916 185 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 UVSSAQ2YD98 709 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 AXDND1Q5T1B0 1012 aaPredicted RBP13.4□□□□□ -0.26
RD3-201ENST00000367002 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 PIBF1Q8WXW3 757 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 WASF1Q92558 559 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 SNRKQ9NRH2 765 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
RD3-201ENST00000367002 ZNF830Q96NB3 372 aaPredicted RBP13.4□□□□□ -0.26
RD3-201ENST00000367002 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
RD3-201ENST00000367002 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
RD3-201ENST00000367002 ZNF213O14771 459 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 SKIDA1Q1XH10 827 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
RD3-201ENST00000367002 CFAP43Q8NDM7 1665 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 CDR1P51861 262 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
RD3-201ENST00000367002 NAPBQ9H115 298 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 BIN1O00499 593 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 BRF1Q92994 677 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 ZBTB3Q9H5J0 574 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 KLHL10Q6JEL2 608 aa13.39□□□□□ -0.27
RD3-201ENST00000367002 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
RD3-201ENST00000367002 WDR62O43379 1518 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms